Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_021072.1 Length=178807 Score E Sequences producing significant alignments: (Bits) Value seq192 652 0.0 seq2 563 1e-155 >seq192 Length=157790 Score = 652 bits (722), Expect = 0.0 Identities = 732/974 (75%), Gaps = 4/974 (0%) Strand=Plus/Plus Query 67834 TCAGCAGCAGCAAGGTCGAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATA 67893 ||| ||||||| || || |||||||| || || || ||||| |||||||||||||||||| Sbjct 367 TCAACAGCAGCTAGATCTAGAGGGAAATTATGGGCATTACGTTCATGCATAACTTCCATA 426 Query 67894 CCCAAACCAGCGCGGTTGAGAACGTCTGCCCAGGTAGGCAGAACCTTACCAGAACTATCA 67953 || | ||||||||| | || || ||||| ||| | || ||| ||||||| Sbjct 427 CCAAGGTTAGCGCGGTTAATAATATCAGCCCAAGTATTAATTACACGACCCTGACTATCA 486 Query 67954 AGGATAGACTGGTTGAAGTTGAAACCATTCAGGTTGAATGCCATGGTGCTAACACCAAGT 68013 | | ||| || ||||| || |||||||| | |||||| ||||| ||||| | ||| | Sbjct 487 ACTACAGATTGATTGAAATTAAAACCATTTAAGTTGAAAGCCATAGTGCTGATACCTAAA 546 Query 68014 GCAGTGAACCAGATACCAACGACAGGCCATGCAGCAAGGAAGAAGTGCAGCGAACGGGAG 68073 || || ||||||||||| || |||||||| ||||| |||||||| || | ||||| || Sbjct 547 GCGGTAAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAGAA 606 Query 68074 TTGTTGAACGATGCATACTGGAAGATCAGACGACCGAAGTATCCATGTGCAGCAACAATG 68133 |||||||| ||||| |||||||||| || || || || ||||| || || || || Sbjct 607 TTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATA 666 Query 68134 TTGTAAGTCTCTTCTTCTTGACCGAACTTGTAACCATAGTTCTGGGACTCAGTTTCAGTG 68193 || || || ||||| ||||||||||| ||||||| | || || ||| |||| ||| Sbjct 667 TTATAGGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTG 726 Query 68194 GTTTCACGAACCAGTGAAGAAGTAACCAGGGAACCATGCATTGCACTGAACAGAGATCCA 68253 ||||| | | || ||| || |||| ||| |||||||| |||||||| || || || Sbjct 727 GTTTCCCTGATCAAACTAGAGGTTACCAAGGACCCATGCATAGCACTGAATAGGGAGCCG 786 Query 68254 CCAAATACGCCAGCAACGCCGAGCATATGGAAGGGGTGCATCAGGATGTTGTGCTCTGCT 68313 || ||||| ||||| ||||| | ||| || || |||||||| |||||||||||||| ||| Sbjct 787 CCGAATACACCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCGGCT 846 Query 68314 TGGAACACCAGCATGTAGTTGAAAGTACCAGAAATGCCGAGAGGCATTGCGTCAGAGAAC 68373 ||||| || | |||| ||||||||||||| || || || || ||||| ||||||| || Sbjct 847 TGGAATACAATCATGAAGTTGAAAGTACCGGAGATTCCTAGGGGCATACCGTCAGAAAAG 906 Query 68374 GAACCTTGACCGAAAGGATAGACCAGGAAGACTGCGGATGCTGCTGCAACAGGTGCAGAG 68433 |||||||| | ||||| | || ||| || || | || ||||||||||| || || Sbjct 907 CTTCCTTGACCAATTGGATATATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAA 966 Query 68434 TATGCAACACAGATCCAAGGACGCATACCAAGACGATAGGAAAGTTCCCATTCACGTCCC 68493 ||||||||| |||||||| |||||||| ||||| | ||||||||| ||||| ||| Sbjct 967 TATGCAACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCC 1026 Query 68494 ATGTATGCAA-AGATACCAATCAGGAAGTGAAAGATTACGAGTTGGAAAGGACCACCATT 68552 ||||| |||| | ||||| | |||||| | | | |||| |||||||||| || Sbjct 1027 ATGTA-GCAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCGTT 1085 Query 68553 GTACAACCACTCATCAAGGGTTGCTGCTTCCCAAATGGGATAAAAGTGAAGACCAATTGC 68612 ||| ||||| ||||||| || || |||||||| || || |||||||| | ||| || || Sbjct 1086 GTATAACCATTCATCAACGGAAGCCGCTTCCCATATCGGGTAAAAGTGCAAACCTATAGC 1145 Query 68613 ATTTGAACTAGGAACAACAGCACCAGAAATGATGTTGTTACCATACAGAAGTGAACCAGC 68672 || |||||| || ||||||||||| || ||||| ||||| || | || |||| Sbjct 1146 TGCAGAGGTAGGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAAAGATCCAGA 1205 Query 68673 AACAGGTTCACGAATACCATCGATGTCCACAGGGGGAGCAGCGATGAAGGCGACGATGAA 68732 ||||||||||||||||||||| || || || || || ||||| ||||| || | || || Sbjct 1206 AACAGGTTCACGAATACCATCAATATCTACTGGAGGTGCAGCAATGAAAGCAATAATAAA 1265 Query 68733 -ACAGATGGTTGCTGCAAGCAGCGTAGGGATCATCAGGACGCCGAACCAACCAACGTAAA 68791 ||||| ||||| | | | ||||||||||||| || || ||||| |||| ||||| Sbjct 1266 TACAGA-AGTTGCGGTCAATAAAGTAGGGATCATCAAAACACCAAACCATCCAATGTAAA 1324 Query 68792 GGCGGTTCTCTGTG 68805 | ||||| || ||| Sbjct 1325 GACGGTTTTCAGTG 1338 Score = 565 bits (626), Expect = 3e-156 Identities = 731/1007 (73%), Gaps = 2/1007 (0%) Strand=Plus/Minus Query 66586 ATTAAAGTGCATTACCACGGGGCAGAACTTCTTCTGGGAATACAAAGTTTTCATGCGGTT 66645 ||||||| || || |||||||| ||||| || || ||||||| || ||||||||| || | Sbjct 35250 ATTAAAGAGCGTTTCCACGGGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCT 35191 Query 66646 GATCGATAGGTGCCAACCATGCACGAAGACCTTCATTCAATAGAATGTTCTTTGTGTAGA 66705 |||| || |||| ||| ||||||| |||||| || || ||||| || || ||||||| Sbjct 35190 GATCTTGAGCCGCCATCCAAGCACGAATACCTTCGTTTAAGAGAATATTTTTGGTGTAGA 35131 Query 66706 ACGTCTCGAACTCTGGGTCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCAC 66765 | ||||| || || || ||||| ||||| | ||| || || || || |||||||| |||| Sbjct 35130 AAGTCTCAAATTCAGGATCTTCCGCTGCACGGATTTCCTGAGAAACGAAGTCATAGGCAC 35071 Query 66766 GAAGGTTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCAAAGACCCATAACAGGAA 66825 | ||||| || || ||||| | | || | | ||| |||| | ||| | || || | Sbjct 35070 GTAGGTTAAGGGCCAGACCGACTACTCCAAGAGCACTCATCCACAAACCGGTTACTGGTA 35011 Query 66826 CAAACAACATAAAGAAATGCAACCACCTCTTATTGCTAAACGCAATACCAAAGATCTGAG 66885 |||| |||||||||||||| ||||| | |||||| ||| |||| |||||||| || | Sbjct 35010 CAAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGGG 34951 Query 66886 ACCAGAAGCGGTTTGCAGTAACCATTGAGTAAGTTTCTTCCTCTTGAGTAGAGTCGAATG 66945 |||| |||||||| || || |||||||| ||||||||||| ||||||| | || || | Sbjct 34950 ACCAAAAGCGGTTAGCGGTGACCATTGAATAAGTTTCTTCAGCTTGAGTTGGGTTAAAAG 34891 Query 66946 CTTTGAAAGTGTTTGCTTGTTCACCATCTTCATACAGAGTATTCTCTACTGTAACACCAT 67005 | ||| || ||||| |||||||||||| | | |||||| ||||| ||| |||||| Sbjct 34890 CACGGAATGTATTTGCACCATCACCATCTTCAAATAAAGTATTTTCTACGGTAGCACCAT 34831 Query 67006 GAATGGCAGAAAGCAATGCACCACCCAGGATACCTGCTACACCCATCATATGAAACGGGT 67065 |||| || | | || ||| | |||| | || || || |||||||||||||| |||| Sbjct 34830 GAATAGCGCATAACAGAGCAGCGCCCAACACCCCAGCAACTCCCATCATATGAAATGGGT 34771 Query 67066 TCAAGGTCCAGTTATGGAATCCTTGTAGGAAGAGAAGGAATCGAAAGATTGCTGAGACCC 67125 |||| ||||| ||||| || ||||| | ||||| | ||||||||| || |||| || | Sbjct 34770 TCAATGTCCAATTATGAAACCCTTGGAAAAAGAGGATGAATCGAAATATAGCTGCTACAC 34711 Query 67126 CGAAAGATGGAGCGAAAAACCAACTCGATTGACCCAGAGGGTAGATGAGAAAGACACTAA 67185 | ||| || || |||||||||| || ||||| || || || || || || ||| || Sbjct 34710 CAAAACTGGGCGCAAAAAACCAACCAGACTGACCTAGCGGATAAATTAGGAATACAGAAA 34651 Query 67186 CAAAAACAGCGATAGGACCAGAGAACGCAATAGCATTGTAGGGACGGATACCGATGAGA- 67244 |||||||||| || ||||| ||||| || || ||||| || || || | | || ||| Sbjct 34650 CAAAAACAGCAATTGGACCGGAGAATGCGATTGCATTATAAGGTCGCA-ATTGAACAGAT 34592 Query 67245 CGTGCCAGTTCAAACTGGCGAAGCATGAAACCAATTAGAGCGAAAGCCCCGTGGAGCGCC 67304 || || |||||||| || || | ||| ||||| ||||| ||||||| ||||| || || Sbjct 34591 CGAGCAAGTTCAAATTGACGTAACATAAAACCTATTAGTCCGAAAGCGCCGTGTAGAGCA 34532 Query 67305 ACAAAATTCCAGAGTCCTCCAAGTTGGATCCAGCGGACGAAATCCCCCTGAGACTCAGGA 67364 |||||| |||| || || || | ||| ||| || ||||| || || | |||||| Sbjct 34531 ACAAAAGTCCACAGACCGCCTAATTGACACCAACGAGTAAAATCTCCTTGTGCTTCAGGA 34472 Query 67365 CCCCAAAGTAGAAGAAGAGAATGACCCATAGCATCAGCAGGCGTTGACACAGCCGCTGTG 67424 ||||| |||| | | ||| || | | | || ||| || || || || || || || Sbjct 34471 CCCCATAGTAACAACAAAGAGTGCGCTAAACTATTAGCCGGAGTGGAAACTGCGGCGGTT 34412 Query 67425 AGAAAATTAGCACCCTCAAGATAACTAGACGCGAGTCCGTGAGTGTACCAGCTTGTGACA 67484 | || ||| || || | ||| | || | ||| || || ||||| || ||| Sbjct 34411 AAGAAGTTACAGCCTTCCAAATAGGAACTTGCTAATCCATGGGTATACCATGAAGTTACA 34352 Query 67485 AACGTAGTACCAGTAAGCCAGCCACCAATTGCCATATAAGCAGTGGGAAAAAGAAGTAGT 67544 || || ||||| || | ||| || || | || | ||| ||| ||||| || | ||| Sbjct 34351 AAGGTTGTACCTGTGAACCAACCCCCTAAAGCGAAATAGGCACAAGGAAAGAGCAATAGG 34292 Query 67545 CCAGACCAACCCACAAAGACAAAGCGATCTCGTTTAAGCCAGTCATC 67591 ||||||||||| ||||| || ||||| || | | ||||||||| Sbjct 34291 CCAGACCAACCTACAAAAACGAAGCGGTCCCTCCGTAACCAGTCATC 34245 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 35511 CTCCCCAGGTAGGATTTGAACCTACGACCAATCGATTAACAGTCGATAGCTCTGCCGCTG 35570 ||||||| |||||||| ||||||||||||| || ||||||| ||| ||||| || ||| Sbjct 110816 CTCCCCAAGTAGGATTCGAACCTACGACCAGTCAGTTAACAGCCGACCGCTCTACCACTG 110875 Query 35571 AGCTACTGAGGA 35582 |||||||||||| Sbjct 110876 AGCTACTGAGGA 110887 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 35511 CTCCCCAGGTAGGATTTGAACCTACGACCAATCGATTAACAGTCGATAGCTCTGCCGCTG 35570 ||||||| |||||||| ||||||||||||| || ||||||| ||| ||||| || ||| Sbjct 132771 CTCCCCAAGTAGGATTCGAACCTACGACCAGTCAGTTAACAGCCGACCGCTCTACCACTG 132712 Query 35571 AGCTACTGAGGA 35582 |||||||||||| Sbjct 132711 AGCTACTGAGGA 132700 >seq2 Length=30405870 Score = 563 bits (624), Expect = 1e-155 Identities = 715/976 (73%), Gaps = 8/976 (1%) Strand=Plus/Minus Query 67834 TCAGCAGCAGCAAGGTCGAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATA 67893 ||| ||||||| || || |||||||| || || || ||||| |||||||||||||||||| Sbjct 16145562 TCAACAGCAGCTAGATCTAGAGGGAAATTATGAGCATTACGTTCATGCATAACTTCCATA 16145503 Query 67894 CCCAAACCAGCGCGGTTGAGAACGTCTGCCCAGGTAGGCAGAACCTTACCAGAACTATCA 67953 || | | ||||||| | || || ||||| ||| | || ||| ||||||| Sbjct 16145502 CCAAGGTTAACGCGGTTAATAATATCAGCCCAAGTATTAATTACACGACCCTGACTATCA 16145443 Query 67954 AGGATAGACTGGTTGAAGTTGAAACCATTCAGGTTGAATGCCATGGTGCTAACACC--AA 68011 | | ||| || ||||| || |||||||| | |||||| ||||| || || | ||| || Sbjct 16145442 ACTACAGATTGATTGAAATTAAAACCATTTAAGTTGAAAGCCATAGTACTGATACCTAAA 16145383 Query 68012 GTGCAGTGAACCAGATACCAACGACAGGCCATGCAGCAAGGAAGAAGTGCAGCGAACGGG 68071 ||| || ||||||||||| || |||||||| ||||| |||||||| || | |||| | Sbjct 16145382 GTG--GTAAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACAAG 16145325 Query 68072 AGTTGTTGAACGATGCATACTGGAAGATCAGACGACCGAAGTATCCATGTGCAGCAACAA 68131 | |||||||| ||||| |||||||||| || || || || ||||| || || | | Sbjct 16145324 AATTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTATGA 16145265 Query 68132 TGTTGTAAGTCTCTTCTTCTTGACCGAACTTGTAACCATAGTTCTGGGACTCAGTTTCAG 68191 | || || || ||||| ||||||||||| ||||||| | || || ||| ||| Sbjct 16145264 TATTATAGGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTTTA 16145205 Query 68192 TGGTTTCACGAACCAGTGAAGAAGTAACCAGGGAACCATGCATTGCACTGAACAGAGATC 68251 ||||||| | | || || || |||| ||| |||||||| |||||||| || || | Sbjct 16145204 TGGTTTCCCTGATCAAACTAGGGGTTACCAAGGACCCATGCATAGCACTGAATAGGGAGC 16145145 Query 68252 CACCAAATACGCCAGCAACGCCGAGCATATGGAAGGGGTGCATCAGGATGTTGTGCTCTG 68311 | || ||||| || || |||| | ||| || || |||||||| ||||||||||||| | Sbjct 16145144 CGCCGAATACACCGGCTGCGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTTAG 16145085 Query 68312 CTTGGAACACCAGCATGTAGTTGAAAGTACCAGAAATGCCGAGAGGCATTGCGTCAGAGA 68371 ||||||| || | |||| ||||||||||||| || || || || | |||| ||||||| | Sbjct 16145084 CTTGGAATACAATCATGAAGTTGAAAGTACCGGAGATTCCTAGGGACATTACGTCAGAAA 16145025 Query 68372 ACGAACCTTGACCGAAAGGATAGACCAGGAAGACTGCGGATGCTGCTGCAACAGGTGCAG 68431 | |||||||| | ||||| | || ||| || || | || ||||||||||| || | Sbjct 16145024 AGCTTCCTTGACCAATTGGATATATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTG 16144965 Query 68432 AGTATGCAACACAGATCCAAGGACGCATACCAAGACGATAGGAAAGTTCCCATTCACGTC 68491 | ||||||||| |||||||| ||| |||| ||||| | || ||||| ||||| | Sbjct 16144964 AATATGCAACAGCAATCCAAGGGCGCCTACCCAGACGGAAACTAATCTCCCACTCACGAC 16144905 Query 68492 CCATGTATGCAA-AGATACCAATCAGGAAGTGAAAGATTACGAGTTGGAAAGGACCACCA 68550 ||||||| |||| | ||||| |||||| | | | |||| |||||||||| Sbjct 16144904 CCATGTA-GCAAGCTACACCAAGTGAGAAGTGTAGAACAATTAGTTCATAAGGACCACCG 16144846 Query 68551 TTGTACAACCACTCATCAAGGGTTGCTGCTTCCCAAATGGGATAAAAGTGAAGACCAATT 68610 ||||| ||||| ||||||| || || |||||||| || || |||||||| | ||| || Sbjct 16144845 TTGTATAACCATTCATCAACGGAAGCCGCTTCCCATATCGGGTAAAAGTGCATACCTATA 16144786 Query 68611 GCATTTGAACTAGGAACAACAGCACCAGAAATGATGTTGTTACCATACAGAAGTGAACCA 68670 || || |||||| || ||||||||||| || ||||| ||||| || | || ||| Sbjct 16144785 GCTGCAGAGGTAGGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAAAGATCCA 16144726 Query 68671 GCAACAGGTTCACGAATACCATCGATGTCCACAGGGGGAGCAGCGATGAAGGCGACGATG 68730 | |||||||| |||||||||||| || || || || || ||||| ||||| | | || Sbjct 16144725 GAAACAGGTTTACGAATACCATCAATATCTACTGGAGGTGCAGCAATGAAAGTAATAATA 16144666 Query 68731 A-AACAGATGGTTGCTGCAAGCAGCGTAGGGATCATCAGGACGCCGAACCAACCAACGTA 68789 | ||||| |||| | | | ||||||||||||| || || ||||| |||| ||| Sbjct 16144665 AGTACAGA-AGTTGTGGTCAATAAAGTAGGGATCATCAAAACACCAAACCATCCAATGTA 16144607 Query 68790 AAGGCGGTTCTCTGTG 68805 ||| | ||| || ||| Sbjct 16144606 AAGACAGTTTTCAGTG 16144591 Score = 82.4 bits (90), Expect = 9e-11 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 35513 CCCCAGGTAGGATTTGAACCTACGACCAATCGATTAACAGTCGATAGCTCTGCCGCTGAG 35572 ||||| |||||||| ||||||||||||| || ||||||| ||| ||||| || ||||| Sbjct 16817725 CCCCAAGTAGGATTAGAACCTACGACCAGTCAGTTAACAGCCGACCGCTCTACCACTGAG 16817666 Query 35573 CTACTGAGGA 35582 |||||||||| Sbjct 16817665 CTACTGAGGA 16817656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 572053027069440