Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq2 136 7e-27 seq6 131 3e-25 seq3 87.8 3e-12 >seq2 Length=30405870 Score = 136 bits (150), Expect = 7e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||||| ||| || || || |||||||| || | || || |||||||| || Sbjct 22653686 ATACCACCTCGCAAACGGAGAACAAGATGCAAGGTGGGTTCCTTCTGGATATTATAATCA 22653745 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | || ||| ||| |||| || ||||| |||||||| | ||||| || |||||| Sbjct 22653746 GCAAGGGTCCTACCATCCTCTAGCTGCTTTCCAGCAAAAATAAGCCTCTGCTGGTCAGGA 22653805 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || ||||||| ||||||||| || || | || | ||| || ||||| ||| ||| Sbjct 22653806 GGGATTCCTTGTTTATCTTGAATCTTCGCCTTGACATTGTCTATGGTATCCGAACCCTCC 22653865 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || ||||| ||||| || || || | || || |||||||||||||| Sbjct 22653866 ACCTCCAGAGTGATAGTCTTTCCAGTCAAAGTCTTAACAAATATTTGCAT 22653915 Score = 114 bits (126), Expect = 2e-20 Identities = 167/236 (71%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| || ||||| || |||||||| || |||||||| | || || || |||||| Sbjct 22653908 ATTTGCATCCCACCCCTTAATCGAAGAACAAGATGCAAAGCAGATTCCTTCTGGATATTA 22653967 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 || || | || || || ||| || | || ||||| |||||||| | || ||||| Sbjct 22653968 TAATCTGCCAAAGTCCTGCCATCCTCAAGCTGCTTTCCTGCAAAAATAAGCCTTTGTTGG 22654027 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 ||||| || || ||||| || ||||| || || | || | ||| || ||||| ||| Sbjct 22654028 TCAGGTGGGATCCCTTCCTTGTCTTGAATCTTTGCCTTCACATTGTCTATGGTATCCGAA 22654087 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||| || || ||||| ||||| || || || | | || |||||||||||||| Sbjct 22654088 CCCTCCACCTCCAGAGTGATAGTCTTTCCAGTCAAAGCCTTGACAAATATTTGCAT 22654143 Score = 84.2 bits (92), Expect = 4e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 193197 GTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATT 193256 || ||| ||| || || || ||||| ||||| || ||||| | || || || ||| Sbjct 22654233 GTCCTACCATCTTCCAACTGCTTTCCAGCAAATATAGGCCTCTGCGGGTCTGGTGGAATT 22654292 Query 193257 CCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCT 193316 || ||||| ||||| || || | || | ||| | ||||| ||| ||| || || Sbjct 22654293 CCCTCTTTGTCTTGAATCTTTGCCTTGACATTGTCTGTGGTATCCGAACCCTCCACCTCA 22654352 Query 193317 AGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| ||||| || || || ||||| || |||||||||||||| Sbjct 22654353 AGAGTGATAGTCTTTCCGGTCAGCGTCTTAACAAATATTTGCAT 22654396 >seq6 Length=30767194 Score = 131 bits (144), Expect = 3e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||||| ||| || || || |||||||| || | || || || |||| || Sbjct 19728845 ATACCACCTCGCAAACGGAGAACAAGATGCAAGGTGGATTCCTTCTGGATGCTATAATCA 19728786 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | || ||| ||| |||| || ||||| |||||||| | ||||| || |||||| Sbjct 19728785 GCAAGGGTCCTACCATCCTCTAGCTGCTTTCCAGCAAAAATAAGCCTCTGCTGGTCAGGA 19728726 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || ||||||||||||||||| || || | || | ||| || ||||| ||| || Sbjct 19728725 GGGATTCCTTCTTTATCTTGAATCTTCGCCTTGACATTGTCTATGGTATCCGAACCCTTC 19728666 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || | ||||| ||||| || || || ||||| || |||||||||||||| Sbjct 19728665 ACCTTAAGAGTGATAGTCTTTCCGGTCAGCGTCTTAACAAATATTTGCAT 19728616 Score = 122 bits (134), Expect = 2e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||||||||||| ||| || |||| ||||| || | || || || || |||||| Sbjct 23848423 ATACCACCTCTCAGTCGGAGAACCAAGTGCAAAGTCGATTCCTTTTGGATGTTGTAGTCG 23848364 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | |||| || || ||||| |||||||||||||| || ||||| || || || Sbjct 23848363 GCGAGGGTTCGGCCGTCCTCCAATTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGT 23848304 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || || || || ||||| || |||| || | || || ||||| || ||| Sbjct 23848303 GGGATGCCCTCCTTGTCTTGGATCTTGGCCTTCACGTTGTCGATGGTATCAGAGCTCTCG 23848244 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 |||||||| ||||| || || || ||||| ||||| || || |||||||| Sbjct 23848243 ACTTCTAGGGTTATGGTCTTCCCGGTTAGGGTTTTGACGAAGATTTGCAT 23848194 Score = 111 bits (122), Expect = 3e-19 Identities = 166/236 (70%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| ||||||||||||||||| || |||| ||||| || | || || ||||| Sbjct 23848201 ATTTGCATACCACCTCTCAATCGGAGAACCAAGTGCAAAGTCGATTCCTTTTGGATATTG 23848142 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 ||||||| | || | || || ||||| || ||||| || || || ||||| || Sbjct 23848141 TAGTCGGCAAGGGTGCGGCCGTCCTCCAATTGCTTGCCGGCGAAGATCAACCTCTGCTGG 23848082 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || || || || || || || ||||| ||||||| || | || || ||||| || Sbjct 23848081 TCTGGGGGGATGCCCTCCTTGTCTTGGATTTTGGCCTTCACGTTGTCGATGGTATCAGAG 23848022 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||| ||||||| ||||| || || || ||||| ||||| || || || ||||| Sbjct 23848021 CTCTCGACTTCTAAGGTTATGGTCTTCCCGGTTAGGGTTTTGACGAAGATCTGCAT 23847966 Score = 109 bits (120), Expect = 1e-18 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||||||||||| || || |||| ||||| || | ||| || || || || || Sbjct 23848651 ATACCACCTCTCAGACGCAGAACCAAGTGCAAAGTTGACTCCTTTTGGATGTTGTAATCC 23848592 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | |||||| || || ||||| || ||||| || || | ||||| ||||| || Sbjct 23848591 GCAAGGGTTCTACCGTCCTCCAATTGCTTACCGGCGAAGATAAGCCTCTGCTGATCTGGG 23848532 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || || || || ||||| || |||| || | || ||| |||||||| ||| Sbjct 23848531 GGGATACCCTCCTTGTCTTGGATCTTGGCCTTCACGTTATCAATGGTATCGGAGCTCTCG 23848472 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || ||||| || ||||| || ||||| ||||| || || || ||||| Sbjct 23848471 ACCTCCAGAGTAATTGTTTTCCCGGTTAGGGTTTTGACGAAAATCTGCAT 23848422 >seq3 Length=27368013 Score = 87.8 bits (96), Expect = 3e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 ||||| ||||| |||| || | || || || || ||||| | || |||| Sbjct 289434 CGAAGCACCAGGTGCAGAGTCGATTCCTTCTGGATGTTGTAGTCAGCTAGGGTTCGGCCG 289375 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || | || || || || || || | | || || || || || || || || || Sbjct 289374 TCCTCGAGCTGCTTCCCTGCGAAGATGAGACGTTGCTGGTCTGGGGGGATGCCCTCCTTG 289315 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 ||||| || |||| ||| | ||| || || |||||||||||||| ||||| |||||| Sbjct 289314 TCTTGGATCTTGGCTTTCACATTGTCGATGGTGTCGGAAGACTCAACCTCTAGGGTTATA 289255 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 || || || ||||| ||||| || || || ||||| || Sbjct 289254 GTCTTCCCCGTTAGGGTTTTGACGAAGATCTGCATCTT 289217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899652240829440