Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq2 109 1e-18 seq6 104 4e-17 seq4 98.7 2e-15 seq7 86.0 1e-11 >seq2 Length=30405870 Score = 109 bits (120), Expect = 1e-18 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||| | ||| || | || | ||| ||||||| || || |||||||||||| Sbjct 22653458 ATTCCACCACGAAGGCGAAGGACAAGATGCAAAGTAGATTCCTTCTGGATATTATAATCT 22653517 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | |||| | | || || | || || || |||||||| | || |||||||||||| Sbjct 22653518 GCCAAAGTCCTGCCATCCTCAAGCTGCTTTCCTGCAAAAATAAGCCTTTGTTGGTCAGGT 22653577 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| |||||||| || || || ||||| ||| ||||| || || Sbjct 22653578 GGGATCCCTTCCTTATCTTGAATCTTTGCCTTCACATTGCCTATGGTATCAGAGCTCTCC 22653637 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || ||||| ||||| || || || || || |||| || |||||||| Sbjct 22653638 ACATCAAGAGTGATGGTCTTGCCCGTCAAGGTCTTAACAAAGATCTGCAT 22653687 Score = 98.7 bits (108), Expect = 2e-15 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 ||| || | ||| || | ||||| || | |||| |||||| || |||||||| | Sbjct 22653232 ACCCCCACGAAGACGAAGTACTAGGTGCAGGGTAGACTCTTTCTGGATGTTATAATCAGC 22653291 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961 | | ||| |||| || | ||| || ||||||||||| | ||||| || || || || Sbjct 22653292 CAGGGTACGTCCGTCCTCAAGTTGCTTCCCAGCAAAAATGAGCCTCTGCTGATCCGGAGG 22653351 Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021 || || ||||| ||||| |||||| ||| ||||| || ||||| || || || Sbjct 22653352 GATACCCTCTTTGTCTTGGATTTTAGCTTTCACATTGTCAATTGTATCGGAACCCTCAAC 22653411 Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 || ||||| || || || || || | |||| || || ||||||||| Sbjct 22653412 ATCAAGAGTGATTGTCTTCCCCGTCAGAGTTTCAACAAAAATCTGCATT 22653460 Score = 95.1 bits (104), Expect = 2e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||||| | || | || | ||| || || | || || ||||||||||| Sbjct 22653686 ATACCACCTCGCAAACGGAGAACAAGATGCAAGGTGGGTTCCTTCTGGATATTATAATCA 22653745 Query 171900 GATAAAGATCGTTCG-TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGG 171958 | || | || | | || || | || || ||||||||||| | ||||| |||||||| Sbjct 22653746 GC-AAGGGTCCTACCATCCTCTAGCTGCTTTCCAGCAAAAATAAGCCTCTGCTGGTCAGG 22653804 Query 171959 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTC 172018 || ||||||| ||||||||| || || || ||||| ||| ||||| || || Sbjct 22653805 AGGGATTCCTTGTTTATCTTGAATCTTCGCCTTGACATTGTCTATGGTATCCGAACCCTC 22653864 Query 172019 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || ||||| || || || ||||| || || |||| ||||| ||||| Sbjct 22653865 CACCTCCAGAGTGATAGTCTTTCCAGTCAAAGTCTTAACAAATATTTGCAT 22653915 Score = 95.1 bits (104), Expect = 2e-14 Identities = 164/238 (69%), Gaps = 8/238 (3%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||| || | ||| | || | || ||||||| || || ||| |||||||| Sbjct 22654395 ATCCCACCCCTTAATCGGAGAACAAGGTGCAAAGTAGATTCCTTCTGAATGTTATAATCA 22654454 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAAT----TAAT----CTCTGTT 171951 | |||| | | || |||||||| || |||||||| || |||| ||||| | Sbjct 22654455 GCCAAAGTCCTACCATCTTCCAATTGCTTTCCAGCAAATATAACTTAATAAGCCTCTGCT 22654514 Query 171952 GGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTG 172011 ||||||| || || || || ||||| ||||| ||| | || ||| || ||||| || | Sbjct 22654515 GGTCAGGCGGAATCCCCTCCTTATCCTGTATCTTAGTCTTGACAATATCAATAGTGTCCG 22654574 Query 172012 ACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 | || || || || || || || || ||||| | ||||| | ||||||||||| Sbjct 22654575 AGCTCTCCACCTCAAGGGTTATAGTCTTGCCAGTAAGGGTTTTCACAAATATCTGCAT 22654632 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||| || | ||| | || | ||| |||| || || || |||||||||||| Sbjct 22653914 ATCCCACCCCTTAATCGAAGAACAAGATGCAAAGCAGATTCCTTCTGGATATTATAATCT 22653973 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | |||| | | || || | || || || |||||||| | || |||||||||||| Sbjct 22653974 GCCAAAGTCCTGCCATCCTCAAGCTGCTTTCCTGCAAAAATAAGCCTTTGTTGGTCAGGT 22654033 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| || ||||| || || || ||||| ||| ||||| || || Sbjct 22654034 GGGATCCCTTCCTTGTCTTGAATCTTTGCCTTCACATTGTCTATGGTATCCGAACCCTCC 22654093 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || ||||| || || || ||||| || | || | ||||| ||||| Sbjct 22654094 ACCTCCAGAGTGATAGTCTTTCCAGTCAAAGCCTTGACAAATATTTGCAT 22654143 >seq6 Length=30767194 Score = 104 bits (114), Expect = 4e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| ||||| | || || || ||||| | || || || || || || Sbjct 23848423 ATACCACCTCTCAGTCGGAGAACCAAGTGCAAAGTCGATTCCTTTTGGATGTTGTAGTCG 23848364 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | | | ||| |||| |||||||| || || |||||||| || ||||| ||||| ||| Sbjct 23848363 GCGAGGGTTCGGCCGTCCTCCAATTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGT 23848304 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || || || ||||| || || || || || || ||||| || || Sbjct 23848303 GGGATGCCCTCCTTGTCTTGGATCTTGGCCTTCACGTTGTCGATGGTATCAGAGCTCTCG 23848244 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 |||||||| || ||||| || || |||| ||||| | ||| || ||||| Sbjct 23848243 ACTTCTAGGGTTATGGTCTTCCCGGTTAGGGTTTTGACGAAGATTTGCAT 23848194 Score = 100 bits (110), Expect = 5e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 |||||| | || || | || | ||| | ||||| |||||| ||||||||||||| Sbjct 23849105 ACCACCACGCAGACGAAGGACAAGATGGAGAGTAGACTCTTTCTGGATATTATAATCTGC 23849046 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961 | | || | || || | ||||| || ||||| || || ||||| ||||| ||||| Sbjct 23849045 AAGGGTACGACCATCCTCAAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCCGGTGG 23848986 Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021 || || || || ||||| || ||| ||| ||||| ||||| || || || || Sbjct 23848985 GATCCCCTCCTTGTCTTGAATCTTAGCTTTGACATTGTCAATAGTGTCAGAGCTCTCAAC 23848926 Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || ||||||||||| || ||||| | || || | || |||||||| Sbjct 23848925 CTCCAGAGTAATGGTCTTCCCAGTCAGGGTCTTCACAAAAATCTGCAT 23848878 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| || || | || || || ||||| | ||| || || || ||||| Sbjct 23848651 ATACCACCTCTCAGACGCAGAACCAAGTGCAAAGTTGACTCCTTTTGGATGTTGTAATCC 23848592 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | | | || |||| |||||||| ||||| || || || | ||||| || || || Sbjct 23848591 GCAAGGGTTCTACCGTCCTCCAATTGCTTACCGGCGAAGATAAGCCTCTGCTGATCTGGG 23848532 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || || || ||||| || || || || ||| || ||||| || || Sbjct 23848531 GGGATACCCTCCTTGTCTTGGATCTTGGCCTTCACGTTATCAATGGTATCGGAGCTCTCG 23848472 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || |||||||| ||||| || |||| ||||| | ||| |||||||| Sbjct 23848471 ACCTCCAGAGTAATTGTTTTCCCGGTTAGGGTTTTGACGAAAATCTGCAT 23848422 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | ||| | || || || ||||| | || || ||||| || || Sbjct 23848195 ATACCACCTCTCAATCGGAGAACCAAGTGCAAAGTCGATTCCTTTTGGATATTGTAGTCG 23848136 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | | | || |||| |||||||| || || || || || || ||||| ||||| || Sbjct 23848135 GCAAGGGTGCGGCCGTCCTCCAATTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGG 23848076 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || || || ||||| ||||| || || || || ||||| || || Sbjct 23848075 GGGATGCCCTCCTTGTCTTGGATTTTGGCCTTCACGTTGTCGATGGTATCAGAGCTCTCG 23848016 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||||| || ||||| || || |||| ||||| | ||| |||||||| Sbjct 23848015 ACTTCTAAGGTTATGGTCTTCCCGGTTAGGGTTTTGACGAAGATCTGCAT 23847966 >seq4 Length=25843236 Score = 98.7 bits (108), Expect = 2e-15 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | || || | || || || | ||| | ||| || ||| ||||| || Sbjct 12721891 ATACCACCACGCAGCCGGAGCACCAAGTGCAGAGTGGACTCCTTTTGAATGTTATAGTCA 12721832 Query 171900 GATAAAGATCGTTCG-TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGG 171958 | || | || ||| || || | || || || ||||| || || ||||| ||||| || Sbjct 12721831 GC-AAGGGTCCTTCCATCCTCGAGCTGCTTGCCTGCAAAGATCAACCTCTGCTGGTCTGG 12721773 Query 171959 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTC 172018 || || || || || || || ||||| || |||||| |||||||| || ||| Sbjct 12721772 GGGAATACCCTCCTTGTCCTGGATTTTGGCCTTAACATTATCAATAGTATCAGAGCTTTC 12721713 Query 172019 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| |||||||||||||| || || | ||||| | ||||||||||| Sbjct 12721712 CACTTCCAGAGTAATGGTTTTCCCGGTCAGAGTTTTCACAAATATCTGCAT 12721662 Score = 95.1 bits (104), Expect = 2e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||| | ||||| | || || || | ||| | ||| || ||| || || || Sbjct 12722119 ATCCCACCACGCAGTCGAAGCACCAAGTGCAGAGTGGACTCCTTTTGAATGTTGTAGTCA 12722060 Query 171900 GATAAAGATCGTTCG-TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGG 171958 | || | || ||| || || | || || || ||||| || || ||||| ||||| || Sbjct 12722059 GC-AAGGGTCCTTCCATCCTCGAGCTGCTTGCCTGCAAAGATCAACCTCTGCTGGTCTGG 12722001 Query 171959 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTC 172018 || || || || || || || ||||| || |||||| |||||||| || ||| Sbjct 12722000 GGGAATACCCTCCTTGTCCTGGATTTTGGCCTTAACATTATCAATAGTATCAGAGCTTTC 12721941 Query 172019 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| |||||||||||||| || || | ||||| | ||||||||||| Sbjct 12721940 CACTTCCAGAGTAATGGTTTTCCCGGTCAGAGTTTTCACAAATATCTGCAT 12721890 Score = 86.0 bits (94), Expect = 1e-11 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 || |||||||||| | || ||| | || |||||||| |||||||||||||| |||| Sbjct 7555454 ATGTTATAATCTGCAAGAGTTCGACCATCTTCCAATTGCTTACCAGCAAAAATCAATCGT 7555513 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTG 171979 ||||||||||| || || ||||| ||||| || Sbjct 7555514 TGTTGGTCAGGAGGGATGCCTTCCTTATCCTG 7555545 >seq7 Length=22388614 Score = 86.0 bits (94), Expect = 1e-11 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 || |||||||||| | || ||| | || |||||||| |||||||||||||| |||||| Sbjct 12116186 ATGTTATAATCTGCAAGAGTTCGGCCATCCTCCAATTGCTTACCAGCAAAAATCAATCTC 12116245 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTG 171979 || || ||||| || || ||||| ||||| || Sbjct 12116246 TGCTGATCAGGAGGGATGCCTTCCTTATCCTG 12116277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905133827673600