Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_021530.1 Length=171407 Score E Sequences producing significant alignments: (Bits) Value seq192 600 1e-166 seq2 509 2e-139 seq1 107 2e-18 seq6 102 9e-17 >seq192 Length=157790 Score = 600 bits (664), Expect = 1e-166 Identities = 722/971 (74%), Gaps = 12/971 (1%) Strand=Plus/Minus Query 157607 AACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACC 157666 ||||| || || | || ||||| || || ||||||| || ||| | ||| | ||||| Sbjct 1331 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACT 1272 Query 157667 ATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGA 157725 ||||| || || | || ||| | ||||| || || || || || || || || ||||| Sbjct 1271 -TCTGTATTTATTATTGCTTTCATTGCTGCACCTCCAGTAGATATTGATGGTATTCGTGA 1213 Query 157726 ACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTACCATC 157785 ||| || |||| || | | ||||| ||||| || || |||||||| || | || | Sbjct 1212 ACCTGTTTCTGGATCTTTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTAC 1153 Query 157786 TTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTG 157845 || || || ||| | ||||| || || || |||||||| || || ||||||| || Sbjct 1152 CTCTGCAGCTATAGGTTTGCACTTTTACCCGATATGGGAAGCGGCTTCCGTTGATGAATG 1093 Query 157846 GCTGTATAACGGTGGTCCTTTCCAACTCGTAGTATTTCACTTCCTCATTGGTAT--CTAT 157903 | | || ||||||||||||| |||| | || | |||||| | ||||| | || | Sbjct 1092 GTTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCT-T 1034 Query 157904 GCATACATGGGACGTGAGTGGGAACTTTCATACCGTTTAGGTATGCGCCCCTGGATCTGT 157963 || |||||||| ||||||||||||||| | |||| | ||||||||||| ||||| | Sbjct 1033 GC-TACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCT 975 Query 157964 GTAGCATATTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGT 158023 || |||||||| ||||| || || || || ||||||| ||| | | ||||| | ||| Sbjct 974 GTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATATATCCAATTGGT 915 Query 158024 CAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTT 158083 ||||| || || || | |||||| || || ||||| |||||||| |||| |||| || Sbjct 914 CAAGGAAGCTTTTCTGACGGTATGCCCCTAGGAATCTCCGGTACTTTCAACTTCATGATT 855 Query 158084 GTATTCCAAGCAGAACACAACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGCTGGG 158143 ||||||||||| || |||||||||||||||||||| || || ||| | || || ||||| Sbjct 854 GTATTCCAAGCCGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGT 795 Query 158144 GTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAGTC--TCGTTACTTCCTCACTCG 158201 |||||||| || || || ||| ||||||||| || ||| | || || | || | | Sbjct 794 GTATTCGGCGGCTCCCTATTCAGTGCTATGCATGG--GTCCTTGGTAACCT-CTAGTTTG 738 Query 158202 TTC-GTGAAACGACTGAAACAGAGTCACAGAACTACGGTTACAAGTTCGGTCAAGAGGAA 158260 || | ||||| || |||| || || || | ||||||| ||||||||||||||| Sbjct 737 ATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAA 678 Query 158261 GAGACCTATAACATCGTCGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATACGCT 158320 || |||||||| ||||| || || ||||| || || || || |||||||||||||| ||| Sbjct 677 GAAACCTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCT 618 Query 158321 TCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATC 158380 |||||||| || ||||| || || |||||||| ||||| |||||||| || || ||| Sbjct 617 AGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATC 558 Query 158381 TGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCAACCTGAACGGTTTCAACTTCAAC 158440 ||||| ||||| | || || ||| ||||| |||||| | || ||||| || ||||| Sbjct 557 TGGTTTACCGCTTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGTTTTAATTTCAAT 498 Query 158441 CAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGATGTACTGAACCGC 158500 || || | ||||| ||||||||||||| | || || ||||| ||| | | |||||| Sbjct 497 CAATCTGTAGTTGATAGTCAGGGTCGTGTAATTAATACTTGGGCTGATATTATTAACCGC 438 Query 158501 GCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGACCTT 158560 ||| ||||||||||||||||||||||| ||||| || || || ||||| || || || Sbjct 437 GCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCCCATAATTTCCCTCTAGATCTA 378 Query 158561 GCTGCTGCTGA 158571 ||||||| ||| Sbjct 377 GCTGCTGTTGA 367 Score = 506 bits (560), Expect = 2e-138 Identities = 718/1007 (71%), Gaps = 2/1007 (0%) Strand=Plus/Plus Query 159306 GATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGGTGGTCTGGACTACTACTTCTT 159365 ||||||||| | | || ||||| |||||||| || |||||||| ||| | || || Sbjct 34245 GATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGCCTATTGCTCTTT 34304 Query 159366 CCCACTGCTTATCTGGCCATTGGCGGTTGGCTTACTGGCACAGCTTTTGTTACGAGTTGG 159425 || ||| ||| | || | || |||||| | || || ||| | ||||| || ||| Sbjct 34305 CCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGG 34364 Query 159426 TACACCCACGGTCTTGCTAGTTCCTATCTTGAGGGTGCTAACTTTCTCACAGCAGCTGTC 159485 || ||||| || | || ||||||||| | || || |||||| | || || || || Sbjct 34365 TATACCCATGGATTAGCAAGTTCCTATTTGGAAGGCTGTAACTTCTTAACCGCCGCAGTT 34424 Query 159486 TCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAG 159545 || || || ||| | | | | || ||| | | |||| ||||||||||| | || Sbjct 34425 TCCACTCCGGCTAATAGTTTAGCGCACTCTTTGTTGTTACTATGGGGTCCTGAAGCACAA 34484 Query 159546 GGGAATTTCCAGCGGTGGTGCCAACTTGGGGGATTATGGAATTTTGTGGCACTCCACGGT 159605 || |||| || ||||| ||| | || || | |||| |||||| || || ||||| Sbjct 34485 GGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTTTTGTTGCTCTACACGGC 34544 Query 159606 GCCTTCGCCCTAATTGGTTTCATGCTCCGTCAGTTTGAACTGGCACG-TCTCATTGGTAT 159664 || |||| ||||| ||||| ||| | ||||| |||||||| || || ||| | | | Sbjct 34545 GCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-T 34603 Query 159665 CCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTCCT 159724 || ||||| ||||| || || ||||| ||||| |||||||||||||| || ||||| Sbjct 34604 GCGACCTTATAATGCAATCGCATTCTCCGGTCCAATTGCTGTTTTTGTTTCTGTATTCCT 34663 Query 159725 CATCTACCCATTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCAGCAAT 159784 || || || | |||||||| |||||||||| || || ||||| || ||||| || Sbjct 34664 AATTTATCCGCTAGGTCAGTCTGGTTGGTTTTTTGCGCCCAGTTTTGGTGTAGCAGCTAT 34723 Query 159785 CTTTAGATTCCTGTTGTTCCTTCAAGGATTTCACAACTGGACGTTAAATCCCTTCCATAT 159844 ||| ||||| | | || | ||||| ||||| || ||||| || || || || ||||| Sbjct 34724 ATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATAT 34783 Query 159845 GATGGGAGTTGCTGGTATACTAGGTGGAGCACTACTCAGTGCCATCCATGGCGTTACTGT 159904 ||||||||||||||| | | || | || || | | || || ||||| | ||| || Sbjct 34784 GATGGGAGTTGCTGGGGTGTTGGGCGCTGCTCTGTTATGCGCTATTCATGGTGCTACCGT 34843 Query 159905 AGAGAACACACTGTATGAAGATGGAGAACAAGCAAATACCTTTAAGGCGTTTGATTCAAC 159964 ||| || || | | ||||||||| || |||||||| || || ||| | |||| Sbjct 34844 AGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAAC 34903 Query 159965 TCAAGAGGAGGAGACTTACTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGG 160024 ||||| || || ||||| || |||||||| || |||||||| ||||| || ||||| || Sbjct 34904 TCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTGG 34963 Query 160025 TATTGCGTTTTCTAACAAGCGGTGGCTTCATTTCTTCATGTTGTTTGTGCCTGTTATGGG 160084 |||| ||||| || || || ||| | |||||||| ||||| ||||| || || | || Sbjct 34964 GGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGG 35023 Query 160085 TCTTTGGACATCCTCTATTGGCATTATTGGCCTTGCTCTTAATCTTCGTGCTTACGATTT 160144 | | |||| || |||| | | || || || ||||| || ||||| || || || Sbjct 35024 TTTGTGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCCCTTAACCTACGTGCCTATGACTT 35083 Query 160145 CGTAAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACCTTCTACACCAAAAA 160204 ||| ||| || ||| | ||||| |||||||| ||||||||||| |||||||||||||| Sbjct 35084 CGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAA 35143 Query 160205 CATCCTATTGAACGAAGGACTACGTGCATGGTTGGCACCTGCTGATCAACCCCATGAAAA 160264 || || || |||||||| | ||||| ||| |||| || ||||| || |||||||| Sbjct 35144 TATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAA 35203 Query 160265 CTTTATCTTCCCAGAAGAAGTATTGCCTAGAGGCAACGCCCTTTAAT 160311 | |||| ||||| || || || | || | || ||||| ||||||| Sbjct 35204 CCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAAT 35250 >seq2 Length=30405870 Score = 509 bits (564), Expect = 2e-139 Identities = 694/956 (73%), Gaps = 12/956 (1%) Strand=Plus/Plus Query 157622 GGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACCATCTGTT-TCATCGT 157680 || ||||| || || ||||||| || ||| | ||| | |||| ||||| | || | Sbjct 16144613 GGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCACAACT-TCTGTACTTATTAT 16144671 Query 157681 CGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTC 157740 | ||| | ||||| || || || || || || || || ||| |||| || |||| || Sbjct 16144672 TACTTTCATTGCTGCACCTCCAGTAGATATTGATGGTATTCGTAAACCTGTTTCTGGATC 16144731 Query 157741 ACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTACCATCTTCCAACGCAATTGG 157800 | | ||||| ||||| || || |||||||| || | || | || || || || Sbjct 16144732 TTTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTACCTCTGCAGCTATAGG 16144791 Query 157801 TCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGG 157860 | | ||||| || || || |||||||| || || ||||||| ||| | || |||||||| Sbjct 16144792 TATGCACTTTTACCCGATATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAACGGTGG 16144851 Query 157861 TCCTTTCCAACTCGTAGTATTTCACTTCCTCA-TTG--GTATCTATGCATACATGGGACG 157917 ||||| |||| | || | ||||| |||| ||| ||| || ||| |||||||| || Sbjct 16144852 TCCTTATGAACTAATTGTTCTACACTT-CTCACTTGGTGTAGCT-TGC-TACATGGGTCG 16144908 Query 157918 TGAGTGGGAACTTTCATACCGTTTAGGTATGCGCCCCTGGATCTGTGTAGCATATTCTGC 157977 ||||||||| || | |||| | |||| |||||| ||||| ||| |||||||| || Sbjct 16144909 TGAGTGGGAGATTAGTTTCCGTCTGGGTAGGCGCCCTTGGATTGCTGTTGCATATTCAGC 16144968 Query 157978 TCCAGTCGCTGCAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTC 158037 ||| || || || || ||||||| ||| | | ||||| | |||||||| || || Sbjct 16144969 TCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATATATCCAATTGGTCAAGGAAGCTTTTC 16145028 Query 158038 CGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGA 158097 || | ||| | || || ||||| |||||||| |||| |||| ||||||||||||| | Sbjct 16145029 TGACGTAATGTCCCTAGGAATCTCCGGTACTTTCAACTTCATGATTGTATTCCAAGCTAA 16145088 Query 158098 ACACAACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATC 158157 |||||||||||||||||||| || || ||| | || | || || |||||||| || || Sbjct 16145089 GCACAACATCCTTATGCACCCATTTCACATGTTAGGCGCAGCCGGTGTATTCGGCGGCTC 16145148 Query 158158 TCTTTTCTCTGCTATGCACGGAAGT-CTCGTTACTTCCTCACTCGTTC-GTGAAACGACT 158215 || ||| ||||||||| || || || | || ||| | | || | ||||| | Sbjct 16145149 CCTATTCAGTGCTATGCATGG--GTCCTTGGTAACCCCTAGTTTGATCAGGGAAACCATA 16145206 Query 158216 GAAACAGAGTCACAGAACTACGGTTACAAGTTCGGTCAAGAGGAAGAGACCTATAACATC 158275 ||| || || || | ||||||| ||||||||||||||||| |||||||| ||| Sbjct 16145207 AAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATC 16145266 Query 158276 GTCGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCC 158335 | || || ||||| || || || || |||||||||||||| ||| |||||||| || Sbjct 16145267 ATAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCT 16145326 Query 158336 CGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTT 158395 |||| || || |||||||| ||||| |||||||| || || |||||||| ||| | | Sbjct 16145327 TGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCACTTTA 16145386 Query 158396 GGCGTCTCCACGATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGAT 158455 || || || ||||| |||||| | || ||||| || ||||| || || | ||||| Sbjct 16145387 GGTATCAGTACTATGGCTTTCAACTTAAATGGTTTTAATTTCAATCAATCTGTAGTTGAT 16145446 Query 158456 GGTCAGGGTCGTGTGTTGAACACCTGGGCAGATGTACTGAACCGCGCTGGTCTTGGTATG 158515 ||||||||||||| | || || ||||| ||| | | ||||||| | ||||||||| Sbjct 16145447 AGTCAGGGTCGTGTAATTAATACTTGGGCTGATATTATTAACCGCGTTAACCTTGGTATG 16145506 Query 158516 GAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGACCTTGCTGCTGCTGA 158571 |||||||||||||| ||||| || || || ||||| || || || ||||||| ||| Sbjct 16145507 GAAGTTATGCATGAACGTAATGCTCATAATTTCCCTCTAGATCTAGCTGCTGTTGA 16145562 >seq1 Length=47851208 Score = 107 bits (118), Expect = 2e-18 Identities = 159/224 (71%), Gaps = 1/224 (0%) Strand=Plus/Plus Query 158750 TACATTCTAGACGCAGCAGAAGAAGCAGGAGTTGATATTAATTACTCTTGTCGTGCTGGT 158809 |||||||| ||||| || || || || || | || | |||||||| | |||||| Sbjct 46743431 TACATTCTTGACGCTGCGGAGGAGGCCGGTATCGACCTACCCTACTCTTGCAGGGCTGGT 46743490 Query 158810 GCTTGCTCTTCATGTGCAGGTAAAATTGTATCTGGAACTGTTGATCAGAGTGATCAGTCG 158869 |||||||||||||||| || ||| |||| || ||| || ||| |||||| Sbjct 46743491 TCTTGCTCTTCATGTGCTGGCAAAGTTGTGGAAGGGGGTGTAGACCAGTCAGATCAGAGC 46743550 Query 158870 TTCTTAGACGATGATCAGATTGCAGCAGGATTTGTTCTTACGTGTGTAGCATATCCAACA 158929 ||| | || ||||| ||||||| | |||||||| ||||| ||||| || ||||| || Sbjct 46743551 TTCCTTGATGATGAACAGATTGATGGTGGATTTGTCCTTACTTGTGTGGCTTATCCTTCA 46743610 Query 158930 TCTGATTGTGTTGTTGTTACTGATCAAGAGGAGAACCTCTACTG 158973 |||||| ||| ||| || | |||| ||| | ||| |||| Sbjct 46743611 TCTGATGTTGTGCTTGAGACCCACAAAGAAGAGGAGCTC-ACTG 46743653 >seq6 Length=30767194 Score = 102 bits (112), Expect = 9e-17 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 158416 CAACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAA 158475 ||| || || ||||| || ||||| || || | ||||| ||||||||||||| | || Sbjct 16007669 CAAACTCAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTGTAATTAA 16007610 Query 158476 CACCTGGGCAGATGTACTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAA 158535 || ||||| ||| | | |||| |||| ||||||||||| ||||||||||| ||||| Sbjct 16007609 TACTTGGGCTGATATTATTAACCACGCTAACCTTGGTATGGACGTTATGCATGAACGTAA 16007550 Query 158536 CGCACACAACTTCCCACTCGACCTTGCTGCTGCTGA 158571 || || || |||| || || | ||| ||| ||| Sbjct 16007549 TGCTCATAATTTCCATCTAGATGTAGCTTCTGTTGA 16007514 Score = 89.7 bits (98), Expect = 6e-13 Identities = 70/84 (83%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 158237 GGTTACAAGTTCGGTCAAGAGGAAGAGACCTATAACATCGTCGCAGCACATGGCTACTTC 158296 ||||||| ||||||||||||||||| |||||||| || || || || ||||| || || Sbjct 12498437 GGTTACATATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGCCGCTCATGGTTATTTT 12498378 Query 158297 GGTCGTTTGATCTTCCAATACGCT 158320 || || |||||||||||||| ||| Sbjct 12498377 GGCCGATTGATCTTCCAATATGCT 12498354 Score = 86.0 bits (94), Expect = 7e-12 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 158237 GGTTACAAGTTCGGTCAAGAGGAAGAGACCTATAACATCGTCGCAGCACATGGCTACTTC 158296 ||||||| ||||||||||||||||| |||||| | || || || || ||||| || || Sbjct 12498661 GGTTACATATTCGGTCAAGAGGAAGAAACCTATTATATTGTAGCCGCTCATGGTTATTTT 12498602 Query 158297 GGTCGTTTGATCTTCCAATACGCTTCA 158323 || || |||||||||||||| ||| || Sbjct 12498601 GGCCGATTGATCTTCCAATATGCTACA 12498575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548373083901440