Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq3 208 9e-48 seq8 91.5 2e-12 seq7 91.5 2e-12 seq6 91.5 2e-12 >seq3 Length=27368013 Score = 208 bits (230), Expect = 9e-48 Identities = 224/294 (76%), Gaps = 2/294 (1%) Strand=Plus/Minus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 ||||||||||||||||||||||||||||||||||| ||||| | |||| | || ||| Sbjct 26803233 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGGCGCGAGCCTCGGAGACCTGG 26803174 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 || ||||||||||||| ||||| || ||||| ||||||||||| ||| ||||| Sbjct 26803173 ACTTCCTTCATGAACCTTCCGGCAAGATTCTCCAAAACGATGCCGTCAGAGGCAGCGAAG 26803114 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGTGGACG 869812 || || || ||||| |||| ||||| |||| | | | || | |||| ||| Sbjct 26803113 AAGGCGAGCACGTGGGTGATGAAGTGCTTCTCGCCAGGGGTTAGAGTTTCCCAATGGCGT 26803054 Query 869813 GTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTAC 869872 ||| || ||| || ||||||||||||||||||| |||||||||||||| |||||| Sbjct 26803053 AGGTCCTGGCAGAGATCAACCTCCTCGGCGGTCCAGAAGGAGGCCTCGGCCTTCTTGTAC 26802994 Query 869873 ATCTCCCATACTTGCTGGTAGCGGATAGGGAAGAGGACA-AAGCGGTTGGGGTT 869925 |||||||| | || | |||| |||| ||||| | ||| ||||||| ||||| Sbjct 26802993 ATCTCCCAGATTTCCGGGTATTGGATCGGGAACA-TACAGAAGCGGTCCGGGTT 26802941 Score = 120 bits (132), Expect = 4e-21 Identities = 168/236 (71%), Gaps = 6/236 (3%) Strand=Plus/Minus Query 869216 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAA 869275 || || ||||| | ||||||||||| |||||||| || ||||| |||||||||||||| Sbjct 26803476 AGTCCCGGCATTAACCCGCGCTTCTTTAGCCAAAATATCGCGCAAAAACTGCCCGAGAAG 26803417 Query 869276 AAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCC 869335 || || || || ||| |||||| | | || |||||| ||||| | || ||| Sbjct 26803416 AATATCCCTTCCACGCAAGCAAAGGCCACGATCCGCTCCGCAAACGATTCTGAGCC---- 26803361 Query 869336 TTGTTGATCCACTTCATCGCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATG 869395 || |||||| | ||||| | |||||| ||| | || | || | || |||||| Sbjct 26803360 --GTCGATCCAGCGTAGGGCCCACTGGGCCTTCTTCGTGACGCAGGGAATGGTATCGATG 26803303 Query 869396 GCGCGAAAGAGGTGGTCCTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAG 869451 ||| |||| || || ||| ||| ||| |||||||| ||||| || | ||||| Sbjct 26803302 GCGTGAAAAAGCCTGTTCTTCTCGTCCGAGTCCTTGATGTAGGTCTCCAGAAGGAG 26803247 Score = 107 bits (118), Expect = 2e-17 Identities = 216/318 (68%), Gaps = 2/318 (1%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| |||||| || || | | |||||| || |||||||| |||| || |||| Sbjct 26803827 GCCTTCTGGTACTCCCCAACCCTCTTCTCGAAGAAATTGGTCTTCCCCTGCAGGCTGATC 26803768 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 | ||||||||| ||||||||| || ||||| ||| | | || ||| | Sbjct 26803767 AGCTCCATCCAATCGAACGGGTTCTGCACATTGTAAATCTTCGAGTACCCAAGCTCACCC 26803708 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 ||||| | || || || |||||||||||||||| ||| || || ||||||| || | Sbjct 26803707 AGCAGCCTATCCGCCACGAACTCGATGTACTGGCTCATCAGATCGCCGTTCATCCCCACT 26803648 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 || || ||| | | |||| ||| |||||| |||| ||||| || || | ||| Sbjct 26803647 AGGGCGCACGGTAAGGCTTCGCACACGAACTCTCTCTCTATCTCCACCGCGTTTCGTATG 26803588 Query 868931 ATCTGCCTGGGCACG-TCGGCCGAGGGCTTGTTGACGAGCATCGTGTAGAGCAGGCAGGC 868989 ||| | || | || || | |||| || |||| || ||| |||| ||| || Sbjct 26803587 ATC-GACTTCACTCGATCCTCGCTCAGCTTCTTCCTCAGCAGCGAGTACAGCAAGCACGC 26803529 Query 868990 AAAGTCGCAGTGCAACCC 869007 |||||||||||||| || Sbjct 26803528 GAAGTCGCAGTGCAAACC 26803511 >seq8 Length=22573980 Score = 91.5 bits (100), Expect = 2e-12 Identities = 85/108 (79%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || || ||||| || |||||||| ||||| ||| | ||| || ||||||| || Sbjct 17231096 GCTGCAAACTATCTGAACATCAAGAGCCTGCTGGATTTGACCTGCCAGACTGTGGCTGAC 17231155 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATC 1592293 ||||||||||| ||| | || |||||||| |||||||||||||||||| Sbjct 17231156 ATGATCAAGGGAAAGGCACCTGAGGAGATTCGCAAGACCTTTAACATC 17231203 >seq7 Length=22388614 Score = 91.5 bits (100), Expect = 2e-12 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || || |||||| | ||||||||| ||||| || || ||| || |||| || || Sbjct 17360593 GCTGCAAACTACTTGAACATCAAGCTCCTGCTGGACCTGACATGCCAGACTGTTGCGGAC 17360652 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||||||| ||| | || ||||||||||| |||||||| || |||||| ||| Sbjct 17360653 ATGATCAAGGGGAAGACCCCGGAGGAGATCCGAAAGACCTTCAATATCAAGAACG 17360707 >seq6 Length=30767194 Score = 91.5 bits (100), Expect = 2e-12 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405 |||| || || ||| ||| || ||| | || |||||||||||||| |||| || | Sbjct 24549420 TGGCGAGCTCACCGGGCAGGACCAGCCTGACCGCGGTCTGGATCTCTCGCGACGTAATGG 24549361 Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGC-CGATGCGGTCGATCATG 1254464 || |||||| || | |||| || |||||| ||| ||| |||| ||| Sbjct 24549360 TGGGCTTCTTGTTGTAGCGAGCCAATCGTGAGGCCTCC-TGCGCGAGCTTCTCGAATATG 24549302 Query 1254465 TCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGC 1254524 ||||||| || |||||||| | ||| | |||| ||||||| || | ||||||||| Sbjct 24549301 TCGTTGATGAAGCTGTTCATGATCCCCATGGCCTTGCTGGAGATCCCGATATCGGGGTGC 24549242 Query 1254525 ACCTGCTTGAGCACCTTGTAGATG 1254548 || ||||| || |||||| ||||| Sbjct 24549241 ACTTGCTTCAGGACCTTGAAGATG 24549218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107123443580864