Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq3 187 4e-41 seq6 127 3e-23 seq8 87.8 3e-11 >seq3 Length=27368013 Score = 187 bits (206), Expect = 4e-41 Identities = 214/288 (74%), Gaps = 6/288 (2%) Strand=Plus/Minus Query 794377 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAA 794436 || || ||||| | ||||||||||| |||||||| || || || |||||||||||||| Sbjct 26803476 AGTCCCGGCATTAACCCGCGCTTCTTTAGCCAAAATATCGCGCAAAAACTGCCCGAGAAG 26803417 Query 794437 AAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCT 794496 || || || || ||| |||||| | |||| |||||| ||||| | || ||| || Sbjct 26803416 AATATCCCTTCCACGCAAGCAAAGGCCACGATCCGCTCCGCAAACGATTCTGAGCCGTC- 26803358 Query 794497 TTGTTGATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATG 794556 |||||| | ||||||| ||||| ||| | || |||| | || |||||| Sbjct 26803357 -----GATCCAGCGTAGGGCCCACTGGGCCTTCTTCGTGACGCAGGGAATGGTATCGATG 26803303 Query 794557 GCGCGAAAGAGGTGGTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAG 794616 ||| |||| || || ||||||| ||| |||||||| |||||| || | ||||| | Sbjct 26803302 GCGTGAAAAAGCCTGTTCTTCTCGTCCGAGTCCTTGATGTAGGTCTCCAGAAGGAGGCTG 26803243 Query 794617 TAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAG 794664 || |||| ||||||||||| |||||||||||||||||||| || ||| Sbjct 26803242 TACATCTCGGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAG 26803195 Score = 161 bits (178), Expect = 2e-33 Identities = 190/253 (75%), Gaps = 8/253 (3%) Strand=Plus/Minus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||||| || ||||| ||||||||||| | ||||| || ||||| ||||||||| Sbjct 26803188 GCCTCGGAGACCTGGACTTCCTTCATGAACCTTCCGGCAAGATTCTCCAAAACGATGCCG 26803129 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 || ||| ||||| |||||||| ||||| |||| ||||| |||| | | | || Sbjct 26803128 TCAGAGGCAGCGAAGAAGGCGAGCACGTGGGTGATGAAGTGCTTCTCGCCAGGGGTTAGA 26803069 Query 796270 GAGACCCAGTGGACCGT--GTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGG 796327 | |||| ||| ||| ||| || ||| || ||||||||||||||||| ||||||| Sbjct 26803068 GTTTCCCAATGG--CGTAGGTCCTGGCAGAGATCAACCTCCTCGGCGGTCCAGAAGGAGG 26803011 Query 796328 CCTCGGCCTTTTTGTACATCTCCC--ATATCCGTTGGTAGCGGATGGGGAACAGAACAAA 796385 |||||||||| ||||||||||||| || |||| |||| |||| ||||||| | || Sbjct 26803010 CCTCGGCCTTCTTGTACATCTCCCAGATTTCCG--GGTATTGGATCGGGAACATACAGAA 26802953 Query 796386 GCGATTGGGGTTC 796398 ||| | |||||| Sbjct 26802952 GCGGTCCGGGTTC 26802940 >seq6 Length=30767194 Score = 127 bits (140), Expect = 3e-23 Identities = 172/237 (73%), Gaps = 2/237 (1%) Strand=Plus/Minus Query 1485473 ACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGA 1485532 ||||||||||||||||||| ||||| || |||||||| |||| || || ||| ||| || Sbjct 24549459 ACTTGGTGACGGCCTTGGTGCCCTCGGAAACGGCGTGTTTGGCGAGCTCACCGGGCAGGA 24549400 Query 1485533 TCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCG 1485592 ||| | || |||||||||||||| || | || ||| |||||| ||| | Sbjct 24549399 CCAGCCTGACCGCGGTCTGGATCTCTCGCGACGTAATGGTGGGCTTCTTGTTGTAGCGAG 24549340 Query 1485593 CCAGGCGGCCGGCCTCGGTGC-CGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATG 1485651 ||| || |||||| ||| ||| |||| |||||||||| || ||||||| Sbjct 24549339 CCAATCGTGAGGCCTC-CTGCGCGAGCTTCTCGAATATGTCGTTGATGAAGCTGTTCATG 24549281 Query 1485652 ATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 ||| ||| | ||| ||||||| || | ||||||||||| ||||| || |||||| Sbjct 24549280 ATCCCCATGGCCTTGCTGGAGATCCCGATATCGGGGTGCACTTGCTTCAGGACCTTG 24549224 >seq8 Length=22573980 Score = 87.8 bits (96), Expect = 3e-11 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 || || ||||| || |||||||| ||| || |||||| ||| |||| ||||| || Sbjct 17231096 GCTGCAAACTATCTGAACATCAAGAGCCTGCTGGATTTGACCTGCCAGACTGTGGCTGAC 17231155 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATC 2035754 | |||||||| ||| | || ||||| || |||||||||||||||||| Sbjct 17231156 ATGATCAAGGGAAAGGCACCTGAGGAGATTCGCAAGACCTTTAACATC 17231203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916225976084288