Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq6 98.7 8e-16 seq7 84.2 2e-11 seq4 84.2 2e-11 >seq6 Length=30767194 Score = 98.7 bits (108), Expect = 8e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 ||||| ||||| |||||||| |||| || ||||| ||||| | || ||| ||| Sbjct 23848422 ATGCAGATTTTCGTCAAAACCCTAACCGGGAAAACAATTACTCTGGAGGTCGAGAGCTC- 23848480 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 |||||| | | | || || ||||| || || || || | ||| ||||| Sbjct 23848481 CGATACCATTGATAACGTGAAGGCCAAGATCCAAGACAAGGAGGGTATCCCCCCAGATCA 23848540 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||||| ||||| | || ||||| || ||||||||| | ||| | ||||| ||||| Sbjct 23848541 GCAGAGGCTTATCTTCGCCGGTAAGCAATTGGAGGACGGTAGAACCCTTGCGGATTACAA 23848600 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||| ||||||||||| || |||||| |||| || | || |||| || Sbjct 23848601 CATCCAAAAGGAGTCAACTTTGCACTTGGTTCTGCGTCTGAGAGGTGG 23848648 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 |||||||| || |||||||| |||| || || ||||| ||| | ||| ||| ||| Sbjct 23848194 ATGCAAATCTTCGTCAAAACCCTAACCGGGAAGACCATAACCCTAGAAGTCGAGAGCTCT 23848253 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||||| ||| | | || || ||||| || || || ||| | || || || Sbjct 23848254 -GATACCATCGACAACGTGAAGGCCAAGATCCAAGACAAGGAGGGCATCCCACCAGACCA 23848312 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||||| | |||| ||| || || || ||||||||| | ||| | || |||||||| Sbjct 23848313 GCAGAGGTTGATTTTTGCCGGAAAGCAATTGGAGGACGGCCGAACCCTCGCCGACTACAA 23848372 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||| |||||||| || || |||||| |||| | || || |||| || Sbjct 23848373 CATCCAAAAGGAATCGACTTTGCACTTGGTTCTCCGACTGAGAGGTGG 23848420 >seq7 Length=22388614 Score = 84.2 bits (92), Expect = 2e-11 Identities = 102/139 (73%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 107649 GATAAAGAAGGCGTGCCCGTGGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAG 107708 ||||| |||||| | || |||||||||||| | |||| ||| ||||| || ||||| Sbjct 12116274 GATAAGGAAGGCATCCCTCCTGATCAGCAGAGATTGATTTTTGCTGGTAAGCAATTGGAG 12116215 Query 107709 GACGCCAAAACAATGGCGGACTACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTG 107768 || | | ||| | || || || ||||| || |||||||| ||| | ||| |||| ||| Sbjct 12116214 GATGGCCGAACTCTTGCAGATTATAACATCCAGAAGGAGTCAACGCTTCACCTGGTTTTG 12116155 Query 107769 AGATTGCGAGGGGGAAATA 107787 || || | || |||| || Sbjct 12116154 AGGCTGAGGGGAGGAACTA 12116136 >seq4 Length=25843236 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 |||||||| |||||||| || |||| || || || || ||| | || || ||| | Sbjct 12761288 ATGCAAATCTTTGTCAAGACACTAACTGGGAAGACGATAACCTTGGAGGTTGAAAGCTCG 12761229 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||||| | | | ||||| ||| ||| ||||| |||||| | ||| ||||| Sbjct 12761228 -GATACCATAGATAATGTAAAGGCAAAAATTCAGGATAAGGAAGGCATTCCCCCTGATCA 12761170 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||||| || || | || ||||| || || ||||| | | || | || || || || Sbjct 12761169 GCAGAGGCTAATCTTCGCTGGTAAGCAACTTGAGGATGGCCGCACCCTTGCCGATTATAA 12761110 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||| |||||||| || || ||||| ||||| | | ||||| || || Sbjct 12761109 CATCCAAAAGGAATCAACTCTGCACCTGGTGCTTCGGTTGCGTGGTGG 12761062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398875866628288