Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq4 102 5e-17 seq6 100 2e-16 >seq4 Length=25843236 Score = 102 bits (112), Expect = 5e-17 Identities = 164/232 (71%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | |||||| || || ||| ||| || || ||||||||||||| Sbjct 12721205 ACCACCACGGAGACGAAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGC 12721146 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| ||||| | || || | || || || ||||| |||| | |||||| ||| | || Sbjct 12721145 GAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGG 12721086 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC---GCTTGATT 33697 | ||||| ||||| ||| || | || |||| ||| | |||||| ||| || Sbjct 12721085 AATGCCTTCCTTGTCCTGAATCTT-GGCTTTGACATTGTCAATGGTGTCAGAGCT---TT 12721030 Query 33698 CCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || || | ||||| || || ||||| | ||||| || ||||||||||| Sbjct 12721029 CAACCTCGAGGGTGATGGTCTTGCCTGTGAGGGTTTTCACGAAGATCTGCAT 12720978 Score = 87.8 bits (96), Expect = 1e-12 Identities = 161/232 (69%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | |||||| || || ||| ||| || || ||||||||||||| Sbjct 12707220 ACCACCACGGAGACGAAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGC 12707161 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| ||||| | || || | || || || ||||| |||| | |||||| ||| | || Sbjct 12707160 GAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGG 12707101 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC---GCTTGATT 33697 | ||||| ||||| || || | || |||| ||| | |||||| ||| || Sbjct 12707100 AATGCCTTCCTTGTCCTGGATCTT-GGCTTTGACATTGTCAATGGTGTCAGAGCT---TT 12707045 Query 33698 CCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || || | ||||| || || || || | ||||| || || |||||||| Sbjct 12707044 CAACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTTTTCACGAAAATCTGCAT 12706993 Score = 84.2 bits (92), Expect = 1e-11 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | || ||| | |||||| || || || ||| || || ||||| || || | Sbjct 1214810 ACCACCACGCAGACGGAGCACCAAGTGGAGCGTTGACTCCTTCTGGATGTTATAGTCTGC 1214869 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| || || | || |||| || || ||||| || |||| | |||||| ||| | || Sbjct 1214870 GAGGGTACGGCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCTGGGGG 1214929 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCA 33700 | |||||| ||||| |||||| || | | | |||| ||||||| ||| | Sbjct 1214930 GATACCTTCCTTGTCTTGAATTTTGGCCTTGA-CGTTGTCAATGGTGTCGGAGCTTTCGA 1214988 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| || || || || | || || || |||||||||||| Sbjct 1214989 CCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATA 1215038 >seq6 Length=30767194 Score = 100 bits (110), Expect = 2e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||||||||||| || | ||||| || | ||| || ||||| |||||||| |||| Sbjct 23848421 ACCACCTCTCAGTCGGAGAACCAAGTGCAAAGTCGATTCCTTTTGGATGTTGTAGTCGGC 23848362 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| || || |||| |||||||| ||||||||||||||||| | |||||| ||| | || Sbjct 23848361 GAGGGTTCGGCCGTCCTCCAATTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGTGG 23848302 Query 33642 CACACCTTCTTTGTC 33656 | || || ||||| Sbjct 23848301 GATGCCCTCCTTGTC 23848287 Score = 95.1 bits (104), Expect = 8e-15 Identities = 163/233 (70%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||||||| || | ||||| || | ||| || ||||| || ||||| |||| Sbjct 23848193 ACCACCTCTCAATCGGAGAACCAAGTGCAAAGTCGATTCCTTTTGGATATTGTAGTCGGC 23848134 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| |||| |||||||| || ||||| || ||||| | |||||| ||| | || Sbjct 23848133 AAGGGTGCGGCCGTCCTCCAATTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCTGGGGG 23848074 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC---GCTTGATT 33697 | || || ||||| ||||| ||| || | ||| | ||| || ||| | Sbjct 23848073 GATGCCCTCCTTGTCTTGGATTTTGGCCTTC-ACGTTGTCGATGGTATCAGAGCT---CT 23848018 Query 33698 CCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || || | || || || || || |||| ||||| || |||||||||||| Sbjct 23848017 CGACTTCTAAGGTTATGGTCTTCCCGGTTAGGGTTTTGACGAAGATCTGCATA 23847965 Score = 89.7 bits (98), Expect = 3e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||||||||||| ||| | ||||| || | ||| ||| ||||| ||||||||||| | Sbjct 23848649 ACCACCTCTCAGACGCAGAACCAAGTGCAAAGTTGACTCCTTTTGGATGTTGTAATCCGC 23848590 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || | |||| |||||||| || ||||| || || | | |||||||||| | || Sbjct 23848589 AAGGGTTCTACCGTCCTCCAATTGCTTACCGGCGAAGATAAGCCTCTGCTGATCTGGGGG 23848530 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACGGTGTCGCTTGATTCCAC 33701 | ||| || ||||| || || |||| || | ||| ||| || || Sbjct 23848529 GATACCCTCCTTGTCTTGGATCTTGGCCTTCACGTTATCAATGGTATCGGAGCTCTCGAC 23848470 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | || || ||||| || |||| ||||| || || ||||||||| Sbjct 23848469 CTCCAGAGTAATTGTTTTCCCGGTTAGGGTTTTGACGAAAATCTGCATA 23848421 Score = 84.2 bits (92), Expect = 1e-11 Identities = 150/215 (70%), Gaps = 8/215 (4%) Strand=Plus/Minus Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 ||||| ||| ||||| |||||| || ||||||||||| | || || | | | || || Sbjct 23848859 CACCAGATGAAGAGTCGACTCTTTCTGGATGTTGTAATCCGCCAGAGTCCTTCCATCCTC 23848800 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659 |||||| || || ||||| |||| | |||||||||| | || | ||||| ||||| Sbjct 23848799 CAATTGCTTCCCAGCAAAGATCAGCCTCTGCTGATCTGGAGGAATGCCTTCCTTGTCCTG 23848740 Query 33660 AATTTTCTGTTTCAACATAGTC-ACGGTGTC---GCTTGATTCCACGTCAACCGTGATCG 33715 ||| ||| ||| |||| ||| | || || ||| || || || | || || | Sbjct 23848739 AATCTTCGCCTTC-ACATTGTCAATCGTATCAGAGCT---CTCGACCTCCAAAGTTATTG 23848684 Query 33716 TTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || ||||| | || || || || ||||||||| Sbjct 23848683 TCTTCCCTGTAAGGGTCTTCACGAATATCTGCATA 23848649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703230832640