Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_025464.1 Length=44147 Score E Sequences producing significant alignments: (Bits) Value seq192 616 4e-172 seq2 538 1e-148 seq6 96.9 1e-15 >seq192 Length=157790 Score = 616 bits (682), Expect = 4e-172 Identities = 737/990 (74%), Gaps = 12/990 (1%) Strand=Plus/Minus Query 18724 TTTTGTGACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTG 18783 |||||| ||||| ||||||| || || ||||||||||| || || |||||||| || Sbjct 1358 TTTTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1299 Query 18784 ATGATTCCGTGTCTCCTTGCAGCTACTATTTGT-TTCATTATTGCCTTCATTGCTGCACC 18842 ||||| || | | | | || ||| | ||| || |||||||| |||||||||||||| Sbjct 1298 ATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATTGCTTTCATTGCTGCACC 1240 Query 18843 TCCTGTAGACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACAA 18902 ||| ||||| |||||||| || || || |||||| | || | | |||||||||||||| Sbjct 1239 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTACTTTATGGAAACAA 1180 Query 18903 CATCATATCGGGAGCCGTCGTTCCGAGCA--GCAATGCCATCGGACTACACTTCTACCCA 18960 || || || || ||| | |||| | | ||| || || || | ||||| ||||| Sbjct 1179 TATTATTTCTGGTGCCATTATTCCTACCTCTGCA--GCTATAGGTTTGCACTTTTACCCG 1122 Query 18961 ATTTGGGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTG 19020 || |||||||| ||| ||||||||||| | |||||||| || || | |||| | Sbjct 1121 ATATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAACTAATT 1062 Query 19021 GTCTTCCACTTCCTCATTGGCGT--CTATGCTTACATGGGACGCGAGTGGGAACTTAGCT 19078 || | |||||| | |||| || || |||| ||||||| || |||||||||||||| | Sbjct 1061 GTTCTACACTTCTTACTTGGTGTAGCT-TGCT-ACATGGGTCGTGAGTGGGAACTTAGTT 1004 Query 19079 ATCGACTAGGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCT 19138 || || || ||||||||||||||| |||||| || |||||||||||||| || || Sbjct 1003 TCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTA 944 Query 19139 CTGCGGTCTTCCTTGTCTATCCATTTGGTCAAGGTTCCTTTAGCGACGCTATGCCTTTGG 19198 |||| || ||| | | |||||| |||||||||| |||| |||| |||||| | | Sbjct 943 CTGCTGTTTTCTTGATATATCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCCCTAG 884 Query 19199 GTATTAGTGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAACATCCTCATGC 19258 | || ||||| ||||||| |||| |||||||||| || || || |||||||| |||| Sbjct 883 GAATCTCCGGTACTTTCAACTTCATGATTGTATTCCAAGCCGAGCACAACATCCTTATGC 824 Query 19259 ACCCGTTCCACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGC 19318 |||| || |||||| | || || |||||||| |||||||| || ||||| ||||| |||| Sbjct 823 ACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGC 764 Query 19319 ACGGTTCGCTTGTTACGTCCTCGCTTG-TGCGTGAAACTACTGAAGAGGTATCTCAGAAC 19377 | || || |||| || || | ||| | | ||||| || ||| | | |||| || Sbjct 763 ATGGGTC-CTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAAT 705 Query 19378 TATGGCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTAT 19437 | || |||| || || ||||| ||||| || ||||| || || || |||||||| ||| Sbjct 704 GAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATCGTAGCCGCTCATGGTTAT 645 Query 19438 TTTGGTCGGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTTT 19497 ||||| || | || ||||| || || ||||||||| |||||| |||||||||| Sbjct 644 TTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTC 585 Query 19498 TTGGCTGCTTGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGCA 19557 | |||||||||||||| || || || |||||| |||| | || | ||||| ||||| Sbjct 584 CTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCTTTAGGTATCAGCACTATGGCT 525 Query 19558 TTCAACTTGAATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCGTGTCATT 19617 |||||||| ||||| ||||| || || || || | |||| | | |||||||| ||| Sbjct 524 TTCAACTTAAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTGTAATT 465 Query 19618 GATACTTGGGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGTAATGCACGAACGT 19677 ||||||||||||| ||| | || || |||||||| || | || || ||||| |||||| Sbjct 464 AATACTTGGGCTGATATTATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGT 405 Query 19678 AATGCTCATAACTTCCCACTTGATTTGGCT 19707 ||||| ||||| ||||| || ||| | ||| Sbjct 404 AATGCCCATAATTTCCCTCTAGATCTAGCT 375 >seq2 Length=30405870 Score = 538 bits (596), Expect = 1e-148 Identities = 722/991 (73%), Gaps = 14/991 (1%) Strand=Plus/Plus Query 18724 TTTTGTGACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTG 18783 |||||| ||||| ||||||| || || ||| ||||||| || || |||||||| || Sbjct 16144571 TTTTGTAACTGGATAACCAGCACTGAAAACTGTCTTTACATTGGATGGTTTGGTGTTTTG 16144630 Query 18784 ATGATTCCGTGTCTCCTTGCAGCTACTATTTGTT-TCATTATTGCCTTCATTGCTGCACC 18842 ||||| || | | | | | ||| | ||| | |||||| | |||||||||||||| Sbjct 16144631 ATGATCCCTACTTTATTGACCACAACT-TCTGTACTTATTATTACTTTCATTGCTGCACC 16144689 Query 18843 TCCTGTAGACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACAA 18902 ||| ||||| |||||||| || || | |||||| | || | | |||||||||||||| Sbjct 16144690 TCCAGTAGATATTGATGGTATTCGTAAACCTGTTTCTGGATCTTTACTTTATGGAAACAA 16144749 Query 18903 CATCATATCGGGAGCCGTCGTTCCGA--GCAGCAATGCCATCGGACTACACTTCTACCCA 18960 || || || || ||| | |||| | | ||| || || || | ||||| ||||| Sbjct 16144750 TATTATTTCTGGTGCCATTATTCCTACCTCTGCA--GCTATAGGTATGCACTTTTACCCG 16144807 Query 18961 ATTTGGGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTG 19020 || |||||||| ||| ||||||||||| | |||||||| || || | |||| | Sbjct 16144808 ATATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAACTAATT 16144867 Query 19021 GTCTTCCACTTCCTCA-TTGGCGT--CTATGCTTACATGGGACGCGAGTGGGAACTTAGC 19077 || | ||||| |||| |||| || || ||| |||||||| || |||||||| |||| Sbjct 16144868 GTTCTACACTT-CTCACTTGGTGTAGCT-TGC-TACATGGGTCGTGAGTGGGAGATTAGT 16144924 Query 19078 TATCGACTAGGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCC 19137 | || || || | ||||||||||||| |||||| || |||||||||||||| || || Sbjct 16144925 TTCCGTCTGGGTAGGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCT 16144984 Query 19138 TCTGCGGTCTTCCTTGTCTATCCATTTGGTCAAGGTTCCTTTAGCGACGCTATGCCTTTG 19197 |||| || ||| | | |||||| |||||||||| |||| |||| ||| | | Sbjct 16144985 ACTGCTGTTTTCTTGATATATCCAATTGGTCAAGGAAGCTTTTCTGACGTAATGTCCCTA 16145044 Query 19198 GGTATTAGTGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAACATCCTCATG 19257 || || ||||| ||||||| |||| |||||||||| ||| | || |||||||| ||| Sbjct 16145045 GGAATCTCCGGTACTTTCAACTTCATGATTGTATTCCAAGCTAAGCACAACATCCTTATG 16145104 Query 19258 CACCCGTTCCACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATG 19317 ||||| || |||||| | || | || ||||| |||||||| || ||||| ||||| ||| Sbjct 16145105 CACCCATTTCACATGTTAGGCGCAGCCGGTGTATTCGGCGGCTCCCTATTCAGTGCTATG 16145164 Query 19318 CACGGTTCGCTTGTTACGTCCTCGCTTG-TGCGTGAAACTACTGAAGAGGTATCTCAGAA 19376 || || || |||| || ||| | ||| | | ||||| | || | | |||| || Sbjct 16145165 CATGGGTC-CTTGGTAACCCCTAGTTTGATCAGGGAAACCATAAAAAATGAATCTGCTAA 16145223 Query 19377 CTATGGCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTA 19436 | || |||| || || ||||| ||||| || ||||| || | || |||||||| || Sbjct 16145224 TGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATCATAGCCGCTCATGGTTA 16145283 Query 19437 TTTTGGTCGGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTT 19496 |||||| || | || ||||| || || ||||||||| ||||| |||||||||| Sbjct 16145284 TTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTTGTTCTTTACATTTCTT 16145343 Query 19497 TTTGGCTGCTTGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGC 19556 | |||||||||||||| || || || |||||| || | | || | || || ||||| Sbjct 16145344 CCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCACTTTAGGTATCAGTACTATGGC 16145403 Query 19557 ATTCAACTTGAATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCGTGTCAT 19616 |||||||| ||||| ||||| || || || || | |||| | | |||||||| || Sbjct 16145404 TTTCAACTTAAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTGTAAT 16145463 Query 19617 TGATACTTGGGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGTAATGCACGAACG 19676 | ||||||||||||| ||| | || || | |||||| || | || || ||||| ||||| Sbjct 16145464 TAATACTTGGGCTGATATTATTAACCGCGTTAACCTTGGTATGGAAGTTATGCATGAACG 16145523 Query 19677 TAATGCTCATAACTTCCCACTTGATTTGGCT 19707 |||||||||||| ||||| || ||| | ||| Sbjct 16145524 TAATGCTCATAATTTCCCTCTAGATCTAGCT 16145554 >seq6 Length=30767194 Score = 96.9 bits (106), Expect = 1e-15 Identities = 106/141 (75%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 19567 AATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCGTGTCATTGATACTTGG 19626 ||||| ||||| || || || || | |||| | | |||||||| ||| |||||||| Sbjct 16007662 AATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTGTAATTAATACTTGG 16007603 Query 19627 GCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGTAATGCACGAACGTAATGCTCAT 19686 ||||| ||| | || | |||||||| || | || || ||||| ||||||||||||||| Sbjct 16007602 GCTGATATTATTAACCACGCTAACCTTGGTATGGACGTTATGCATGAACGTAATGCTCAT 16007543 Query 19687 AACTTCCCACTTGATTTGGCT 19707 || |||| || ||| | ||| Sbjct 16007542 AATTTCCATCTAGATGTAGCT 16007522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141148478180736