Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02]
192 sequences; 227,569,171 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq3 87.8 2e-12
seq4 84.2 2e-11
>seq3
Length=27368013
Score = 87.8 bits (96), Expect = 2e-12
Identities = 145/209 (69%), Gaps = 3/209 (1%)
Strand=Plus/Plus
Query 46773 AAAAAGGCCCAGTGGGCCATGAAGTGGATCGAGAGCGAGACCGCCACGCTGGCCGAGCGC 46832
|| ||||||||||||||| | |||||||| || | | || | || |||||
Sbjct 26803328 AAGAAGGCCCAGTGGGCCCTACGCTGGATCGA---CGGCTCAGAATCGTTTGCGGAGCGG 26803384
Query 46833 ATGGTGGCATTCGCGATAGTCGAAGGCGTGtttttttCGGGCAGTTTTGCCGCCATTTTT 46892
|| ||||| || || || ||||| | || || |||||||||||| ||| || |||
Sbjct 26803385 ATCGTGGCCTTTGCTTGCGTGGAAGGGATATTCTTCTCGGGCAGTTTTTGCGCGATATTT 26803444
Query 46893 TACATTAAAACCAAAGGCATAATGCCGGGCCTGACGTTCAGTAACGAGTTGATCTCGCGC 46952
| | || | || |||||||||| ||||||||| |||||||| ||||||||
Sbjct 26803445 TGGCTAAAGAAGCGCGGGTTAATGCCGGGACTGACGTTCTCAAACGAGTTAATCTCGCGA 26803504
Query 46953 GACGAAGGACTACACACGGACTTTGCGTG 46981
|| || || | ||| ||||| |||||
Sbjct 26803505 GATGAGGGTTTGCACTGCGACTTCGCGTG 26803533
>seq4
Length=25843236
Score = 84.2 bits (92), Expect = 2e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| || ||||||||||| || | || | | ||| |||||||| ||||||| |
Sbjct 12722311 GACTCCTTCTGAATGTTGTAATCTGCAAGAGTCCTCCCATCCTCGAGCTGCTTACCGGCA 12722252
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| || | ||| || |||||||| ||||| || || || ||| || ||||
Sbjct 12722251 AAGATGAGCCTCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTCACA 12722192
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | ||||| | |||||| || | ||| | || || ||||||||||| ||
Sbjct 12722191 TTATCAATTGTATCCGAACTCTCCACCTCCAACGTTATGGTCTTGCCAGTCAGAGTCTTC 12722132
Query 132110 ATGAAAATCTGCAT 132123
| || ||||||||
Sbjct 12722131 ACAAAGATCTGCAT 12722118
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476610056133120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |