Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq3 87.8 2e-12 seq4 84.2 2e-11 >seq3 Length=27368013 Score = 87.8 bits (96), Expect = 2e-12 Identities = 145/209 (69%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 46773 AAAAAGGCCCAGTGGGCCATGAAGTGGATCGAGAGCGAGACCGCCACGCTGGCCGAGCGC 46832 || ||||||||||||||| | |||||||| || | | || | || ||||| Sbjct 26803328 AAGAAGGCCCAGTGGGCCCTACGCTGGATCGA---CGGCTCAGAATCGTTTGCGGAGCGG 26803384 Query 46833 ATGGTGGCATTCGCGATAGTCGAAGGCGTGtttttttCGGGCAGTTTTGCCGCCATTTTT 46892 || ||||| || || || ||||| | || || |||||||||||| ||| || ||| Sbjct 26803385 ATCGTGGCCTTTGCTTGCGTGGAAGGGATATTCTTCTCGGGCAGTTTTTGCGCGATATTT 26803444 Query 46893 TACATTAAAACCAAAGGCATAATGCCGGGCCTGACGTTCAGTAACGAGTTGATCTCGCGC 46952 | | || | || |||||||||| ||||||||| |||||||| |||||||| Sbjct 26803445 TGGCTAAAGAAGCGCGGGTTAATGCCGGGACTGACGTTCTCAAACGAGTTAATCTCGCGA 26803504 Query 46953 GACGAAGGACTACACACGGACTTTGCGTG 46981 || || || | ||| ||||| ||||| Sbjct 26803505 GATGAGGGTTTGCACTGCGACTTCGCGTG 26803533 >seq4 Length=25843236 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || ||||||||||| || | || | | ||| |||||||| ||||||| | Sbjct 12722311 GACTCCTTCTGAATGTTGTAATCTGCAAGAGTCCTCCCATCCTCGAGCTGCTTACCGGCA 12722252 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || | ||| || |||||||| ||||| || || || ||| || |||| Sbjct 12722251 AAGATGAGCCTCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTCACA 12722192 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | ||||| | |||||| || | ||| | || || ||||||||||| || Sbjct 12722191 TTATCAATTGTATCCGAACTCTCCACCTCCAACGTTATGGTCTTGCCAGTCAGAGTCTTC 12722132 Query 132110 ATGAAAATCTGCAT 132123 | || |||||||| Sbjct 12722131 ACAAAGATCTGCAT 12722118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476610056133120