Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_026923.1 Length=179110 Score E Sequences producing significant alignments: (Bits) Value seq192 607 9e-169 seq2 506 2e-138 seq6 105 8e-18 seq3 87.8 2e-12 >seq192 Length=157790 Score = 607 bits (672), Expect = 9e-169 Identities = 748/1017 (74%), Gaps = 8/1017 (1%) Strand=Plus/Plus Query 159379 TTTGATGTCCTGGATGACTGGCTTAAACGAGATCGCTTTGTCTTTGTGGGTTGGTCTGGA 159438 |||||| | ||||||||||| | | || ||||| || ||||| ||||||||||| Sbjct 34233 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGC 34292 Query 159439 CTCCTACTTCTTCCCACTGCTTATATGGCCATTGGCGGTTGGCTTACTGGCACGACTTTT 159498 || | || |||| ||| ||| | || | || |||||| | || || || || ||| Sbjct 34293 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 34352 Query 159499 ATCACGAGTTGGTACACCCACGGTCTTGCTAGTTCCTACCTTGAAGGTGCTAATTTTCTC 159558 | || ||||| ||||| || | || |||||||| | ||||| ||| || | Sbjct 34353 GTAACTTCATGGTATACCCATGGATTAGCAAGTTCCTATTTGGAAGGCTGTAACTTCTTA 34412 Query 159559 ACGGCAGCTGTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGT 159618 || || || || || || || ||| || | | | || ||| | | |||| |||||| Sbjct 34413 ACCGCCGCAGTTTCCACTCCGGCTAATAGTTTAGCGCACTCTTTGTTGTTACTATGGGGT 34472 Query 159619 CCTGAGTCTCAAGGCGACTTCCAACGCTGGTGCCAACTTGGAGGGATTTGGTCCTTTGTT 159678 ||||| | ||||| || || || ||||| ||| | || || | ||| | |||||| Sbjct 34473 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTTTTGTT 34532 Query 159679 GCTCTCCACGGTGCATTCGCTCTCATAGGTTTTATGCTACGGCAATTTGAAATTGCTCG- 159737 ||||| ||||| || |||| || |||||||||||| |||| ||||||||| ||||||| Sbjct 34533 GCTCTACACGGCGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGA 34592 Query 159738 TCTAGTTGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGT 159797 ||| ||| | || ||||| ||||| || || ||||| ||||| |||||||||||||| Sbjct 34593 TCT-GTTCAATTGCGACCTTATAATGCAATCGCATTCTCCGGTCCAATTGCTGTTTTTGT 34651 Query 159798 CAGCGTATTCCTTATCTATCCACTGGGTCAGTCTTCATGGTTCTTTGCACCTAGTTTCGG 159857 |||||||| || ||||| || ||||||||| ||||| ||||| || ||||| || Sbjct 34652 TTCTGTATTCCTAATTTATCCGCTAGGTCAGTCTGGTTGGTTTTTTGCGCCCAGTTTTGG 34711 Query 159858 GGTAGCAGCAATCTTTAGAT---TCCTGTTGTTCCTTCAGGGTTTCCACAACTGGACCCT 159914 |||||||| || ||| ||| |||| || |||| ||||||| || || ||||| | Sbjct 34712 TGTAGCAGCTATATTTCGATTCATCCTCTTTTTCC--AAGGGTTT-CATAATTGGACATT 34768 Query 159915 CAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTGTTGTGTGCAAT 159974 ||||| || |||||||||||||||||||| | | || | || ||||| || || || Sbjct 34769 GAACCCATTTCATATGATGGGAGTTGCTGGGGTGTTGGGCGCTGCTCTGTTATGCGCTAT 34828 Query 159975 CCATGGTGCTACTGTAGAGAACACATTGTTTGAAGATGGAGAACAAGCAAACACATTTAA 160034 ||||||||||| ||||| || || || ||||||||||| || ||||| ||||| Sbjct 34829 TCATGGTGCTACCGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCG 34888 Query 160035 GGCGTTTGAGCCTACTCAAGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTG 160094 || ||| | || ||||||| ||||| |||||||| |||||||| || |||||||| || Sbjct 34889 TGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTG 34948 Query 160095 GTCGCAGATCTTCGGTGTTGCATTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTT 160154 ||| || ||||| || ||||| ||||| || || || ||| | ||||| || ||||| || Sbjct 34949 GTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATT 35008 Query 160155 TGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTTTCAACCT 160214 ||| || || | ||| | |||| || |||| | | ||||| || | ||||| Sbjct 35009 TGTACCAGTAACCGGTTTGTGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCCCTTAACCT 35068 Query 160215 TCGTGCTTACGATTTCGTGAGTCAGGAGATTAGAGCAGCAGAAGATCCTGAATTTGAGAC 160274 ||||| || || ||||| |||||| || | ||||| |||||||||||||||||||| Sbjct 35069 ACGTGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGAC 35128 Query 160275 CTTCTACACCAAGAACATCCTATTGAATGAAGGACTTCGTGCTTGGATGGCACCTGCTGA 160334 ||||||||||| || || || || || ||||| |||||||||||||||| || || Sbjct 35129 TTTCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGA 35188 Query 160335 TCAACCACATGAAAACTTTATCTTCCCTGAGGAAGTACTACCTAGAGGTAACGCACT 160391 ||| || ||||||||| |||| ||||||||||| || ||||| | || ||||| || Sbjct 35189 TCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 35245 Score = 596 bits (660), Expect = 2e-165 Identities = 731/989 (74%), Gaps = 12/989 (1%) Strand=Plus/Minus Query 157685 TGGGTAACCTCAACCAACAACCGTTTGTATGTTGGTTGGTTCGGTGTACTGATGATTCCT 157744 ||| ||||| || | |||||| | || |||| ||||| ||||| ||||||| ||| Sbjct 1349 TGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCT 1290 Query 157745 ACGTTGCTTGCTGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGA 157803 || || | | |||||| ||||| || || | || ||| | ||||| || || || || Sbjct 1289 ACTTTATTGACCGCAACT-TCTGTATTTATTATTGCTTTCATTGCTGCACCTCCAGTAGA 1231 Query 157804 CATTGACGGCATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACAACATCATCTC 157863 ||||| || || || ||||| ||| |||| || | | ||||| ||||| || || || Sbjct 1230 TATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTACTTTATGGAAACAATATTATTTC 1171 Query 157864 TGGTGCAGTTGTTCCTAGTTCAAACGCAATCGGTCTCCACTTCTACCCCATCTGGGAAGC 157923 |||||| || |||||| || || || ||| | ||||| ||||| || |||||||| Sbjct 1170 TGGTGCCATTATTCCTACCTCTGCAGCTATAGGTTTGCACTTTTACCCGATATGGGAAGC 1111 Query 157924 AGCATCTCTTGACGAGTGGCTGTATAACGGTGGTCCTTTCCAACTTGTAGTATTCCACTT 157983 || || |||| || ||| | || ||||||||||||| |||| | || | ||||| Sbjct 1110 GGCTTCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTT 1051 Query 157984 CCTGATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTCTCTTACCGTTTAGGTAT 158043 | | | || | | ||| ||||| |||||||||||||| || |||| | ||||| Sbjct 1050 CTTACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTAT 991 Query 158044 GCGCCCATGGATCTGTGTAGCATATTCTGCTCCAGTCGCTGCAGCGAGTGCAGTATTCCT 158103 |||||| ||||| ||| |||||||| ||||| || || || || | ||| || ||| | Sbjct 990 GCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTT 931 Query 158104 AGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTAC 158163 | ||||| | |||||||| || || || | |||||| || || ||||| ||||| Sbjct 930 GATATATCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCCCTAGGAATCTCCGGTAC 871 Query 158164 TTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCACCCGTTCCATAT 158223 ||| |||| |||| ||||||||||||| || |||||||||||||||||||| || || || Sbjct 870 TTTCAACTTCATGATTGTATTCCAAGCCGAGCACAACATCCTTATGCACCCATTTCACAT 811 Query 158224 GCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTC--TC 158281 | | || || ||||| |||||||| || || || ||| |||||||||||| ||| | Sbjct 810 GTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGG--GTCCTTG 753 Query 158282 GTTACTTCCTCACTCGTTC-GTGAAACGACTGAAACAGAGTCACAGAACTACGGTTATAA 158340 || || | || | | || | ||||| || |||| || || || | ||||| | Sbjct 752 GTAACCT-CTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAG 694 Query 158341 GTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCAGCCCATGGCTACTTCGGTCGTTT 158400 ||||||||||| ||||| ||||| || ||||| || || ||||| || || || || || Sbjct 693 ATTCGGTCAAGAGGAAGAAACCTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATT 634 Query 158401 GATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATG 158460 |||||||||||| ||| |||||||| || ||||| || || |||||||| ||||| || Sbjct 633 GATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTG 574 Query 158461 GCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCA--ACCATGGCATTCAACCTG 158518 |||||| || || |||||||| |||| ||| || ||| || ||||| |||||| | Sbjct 573 GCCTGTAGTAGGTATCTGGTTTACCG--CTTTAGGTATCAGCACTATGGCTTTCAACTTA 516 Query 158519 AACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGG 158578 || ||||| || ||||| || || | ||||| ||||||||||||| | || || ||| Sbjct 515 AATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTGTAATTAATACTTGG 456 Query 158579 GCAGATGTACTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACAC 158638 || ||| | | ||||||||| ||||||||||||||||||||||| ||||| || || Sbjct 455 GCTGATATTATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCCCAT 396 Query 158639 AACTTCCCACTGGATCTTGCTGCTGCTGA 158667 || ||||| || ||||| ||||||| ||| Sbjct 395 AATTTCCCTCTAGATCTAGCTGCTGTTGA 367 >seq2 Length=30405870 Score = 506 bits (560), Expect = 2e-138 Identities = 710/988 (72%), Gaps = 10/988 (1%) Strand=Plus/Plus Query 157685 TGGGTAACCTCAACCAACAACCGTTTGTATGTTGGTTGGTTCGGTGTACTGATGATTCCT 157744 ||| ||||| || | ||| || | || |||| ||||| ||||| ||||||| ||| Sbjct 16144580 TGGATAACCAGCACTGAAAACTGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCT 16144639 Query 157745 ACGTTGCTTGCTGCAACTATCTGTT-TCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGA 157803 || || | | ||||| ||||| | || | | ||| | ||||| || || || || Sbjct 16144640 ACTTTATTGACCACAACT-TCTGTACTTATTATTACTTTCATTGCTGCACCTCCAGTAGA 16144698 Query 157804 CATTGACGGCATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACAACATCATCTC 157863 ||||| || || || |||| ||| |||| || | | ||||| ||||| || || || Sbjct 16144699 TATTGATGGTATTCGTAAACCTGTTTCTGGATCTTTACTTTATGGAAACAATATTATTTC 16144758 Query 157864 TGGTGCAGTTGTTCCTAGTTCAAACGCAATCGGTCTCCACTTCTACCCCATCTGGGAAGC 157923 |||||| || |||||| || || || ||| | ||||| ||||| || |||||||| Sbjct 16144759 TGGTGCCATTATTCCTACCTCTGCAGCTATAGGTATGCACTTTTACCCGATATGGGAAGC 16144818 Query 157924 AGCATCTCTTGACGAGTGGCTGTATAACGGTGGTCCTTTCCAACTTGTAGTATTCCACTT 157983 || || |||| || ||| | || ||||||||||||| |||| | || | ||||| Sbjct 16144819 GGCTTCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTT 16144878 Query 157984 CCTGATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTCTCTTACCGTTTAGGTAT 158043 | | || | | ||| ||||| ||||||||||| | || |||| | |||| Sbjct 16144879 CTCACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAGATTAGTTTCCGTCTGGGTAG 16144938 Query 158044 GCGCCCATGGATCTGTGTAGCATATTCTGCTCCAGTCGCTGCAGCGAGTGCAGTATTCCT 158103 |||||| ||||| ||| |||||||| ||||| || || || || | ||| || ||| | Sbjct 16144939 GCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTT 16144998 Query 158104 AGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTAC 158163 | ||||| | |||||||| || || || | ||| | || || ||||| ||||| Sbjct 16144999 GATATATCCAATTGGTCAAGGAAGCTTTTCTGACGTAATGTCCCTAGGAATCTCCGGTAC 16145058 Query 158164 TTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCACCCGTTCCATAT 158223 ||| |||| |||| ||||||||||||| | |||||||||||||||||||| || || || Sbjct 16145059 TTTCAACTTCATGATTGTATTCCAAGCTAAGCACAACATCCTTATGCACCCATTTCACAT 16145118 Query 158224 GCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGT-CTCG 158282 | | || | || || |||||||| || || || ||| |||||||||||| || || | Sbjct 16145119 GTTAGGCGCAGCCGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGG--GTCCTTG 16145176 Query 158283 TTACTTCCTCACTCGTTC-GTGAAACGACTGAAACAGAGTCACAGAACTACGGTTATAAG 158341 || ||| | | || | ||||| | ||| || || || | ||||| | Sbjct 16145177 GTAACCCCTAGTTTGATCAGGGAAACCATAAAAAATGAATCTGCTAATGAAGGTTACAGA 16145236 Query 158342 TTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCAGCCCATGGCTACTTCGGTCGTTTG 158401 ||||||||||| ||||| ||||| || ||| | || || ||||| || || || || ||| Sbjct 16145237 TTCGGTCAAGAGGAAGAAACCTATAATATCATAGCCGCTCATGGTTATTTTGGCCGATTG 16145296 Query 158402 ATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGG 158461 ||||||||||| ||| |||||||| || |||| || || |||||||| ||||| ||| Sbjct 16145297 ATCTTCCAATATGCTAGTTTCAACAATTCTTGTTCTTTACATTTCTTCCTAGCTGCTTGG 16145356 Query 158462 CCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCA--ACCATGGCATTCAACCTGA 158519 ||||| || || |||||||| || | ||| || ||| || ||||| |||||| | | Sbjct 16145357 CCTGTAGTAGGTATCTGGTTTAC--CACTTTAGGTATCAGTACTATGGCTTTCAACTTAA 16145414 Query 158520 ACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGG 158579 | ||||| || ||||| || || | ||||| ||||||||||||| | || || |||| Sbjct 16145415 ATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTGTAATTAATACTTGGG 16145474 Query 158580 CAGATGTACTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACA 158639 | ||| | | ||||||| | ||||||||||||||||||||||| ||||| || || | Sbjct 16145475 CTGATATTATTAACCGCGTTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATA 16145534 Query 158640 ACTTCCCACTGGATCTTGCTGCTGCTGA 158667 | ||||| || ||||| ||||||| ||| Sbjct 16145535 ATTTCCCTCTAGATCTAGCTGCTGTTGA 16145562 >seq6 Length=30767194 Score = 105 bits (116), Expect = 8e-18 Identities = 117/156 (75%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 158512 CAACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAA 158571 ||| || || ||||| || ||||| || || | ||||| ||||||||||||| | || Sbjct 16007669 CAAACTCAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTGTAATTAA 16007610 Query 158572 CACCTGGGCAGATGTACTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAA 158631 || ||||| ||| | | |||| |||| ||||||||||| ||||||||||| ||||| Sbjct 16007609 TACTTGGGCTGATATTATTAACCACGCTAACCTTGGTATGGACGTTATGCATGAACGTAA 16007550 Query 158632 CGCACACAACTTCCCACTGGATCTTGCTGCTGCTGA 158667 || || || |||| || ||| | ||| ||| ||| Sbjct 16007549 TGCTCATAATTTCCATCTAGATGTAGCTTCTGTTGA 16007514 >seq3 Length=27368013 Score = 87.8 bits (96), Expect = 2e-12 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 159774 CTCTGGTCCTATTGCTGTTTTTGTCAGCGTATTCCTTATCTATCCACTGGGTCAGTCTTC 159833 ||| ||||| |||||||||||||| |||||||| || |||||||| |||||| | Sbjct 2926991 CTCCGGTCCAATTGCTGTTTTTGTTTATGTATTCCTAATTTATCCACTAAGTCAGTTTGG 2927050 Query 159834 ATGGTTCTTTGCACCTAGTTTCGGGGTAGCAGCAATCTTTAGATTC 159879 ||||| ||||| || | ||| || |||||||| || ||| ||||| Sbjct 2927051 TTGGTTTTTTGCGCCCAATTTTGGTGTAGCAGCTATATTTTGATTC 2927096 Score = 86.0 bits (94), Expect = 7e-12 Identities = 97/128 (76%), Gaps = 4/128 (3%) Strand=Plus/Plus Query 160249 GCAGCAGAAGATCCTGAATTTGAGACCTTCTACACCAAGAACATCCTATTGAATGAAGGA 160308 |||| ||||||||||||||| | || || |||||||| || || | || || ||||| Sbjct 18684803 GCAGTGGAAGATCCTGAATTTTAAACTTTTTACACCAAAAATATTATCTTAAACGAAGGT 18684862 Query 160309 CTTCGTGCTTGGATGGCACCTGCTGATCAACCACATGAAAACTTTATCTTCCCTGAGGAA 160368 ||||||||| || || || ||||| || ||| ||||| |||| ||||||||||| Sbjct 18684863 ATTCGTGCTT-GACGG---CTCAAGATCAGCCTCATAAAAACCTTATATTCCCTGAGGAG 18684918 Query 160369 GTACTACC 160376 || || || Sbjct 18684919 GTTCTTCC 18684926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 573022624742400