Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq192 569 3e-157 seq2 482 3e-131 seq6 86.0 9e-12 >seq192 Length=157790 Score = 569 bits (630), Expect = 3e-157 Identities = 729/1002 (73%), Gaps = 2/1002 (0%) Strand=Plus/Minus Query 174459 TGGGATCAGTTTTGTTCCTGGGTCACATCAACCAACAATCGTCTTTACGTCGGTTGGTTC 174518 |||| || |||||| |||| | || || | || ||||||||| | || ||||| Sbjct 1367 TGGGGTCGCTTTTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTT 1308 Query 174519 GGTGTTCTAATGATTCCTACATTGTTAGCCGCAACTGTATGT-TTCATTATCGCTTTCGT 174577 |||||| | ||||| ||||| || || |||||||| | ||| || ||||| |||||| | Sbjct 1307 GGTGTTTTGATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATTGCTTTCAT 1249 Query 174578 GGGTGCTCCCCCAGTGGACATCGACGGAATCCGTGAACCAGTAGCTGGTTCACTCATGTA 174637 | ||| || ||||| || || || || || |||||||| || |||| || | | || Sbjct 1248 TGCTGCACCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTACTTTA 1189 Query 174638 TGGAAACAACATCATCTCTGGTGCAGTTGTTCCTAGTTCAAACGCAATCGGTCTACACTT 174697 ||||||||| || || |||||||| || |||||| || || || ||| | ||||| Sbjct 1188 TGGAAACAATATTATTTCTGGTGCCATTATTCCTACCTCTGCAGCTATAGGTTTGCACTT 1129 Query 174698 CTACCCAATCTGGGAAGCAGCCACACTCGACGAATGGCTCTACAACGGTGGTCCTTTCCA 174757 ||||| || |||||||| || | | || |||||| | |||||||||||||||| | Sbjct 1128 TTACCCGATATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGA 1069 Query 174758 ACTAGTTGTCTTCCACTTCCTTATTGGTATCTACGCCTATATGGGACGTGAGTGGGAACT 174817 |||| |||| | |||||| | ||||| | ||| ||||| |||||||||||||| Sbjct 1068 ACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACT 1009 Query 174818 CTCTTATCGTTTAGGTATGAGACCTTGGATCTGTGTAGCATACTCTGCACCAGTTGCAGC 174877 || ||| | |||||| | |||||||| ||| ||||| || || || |||||||| Sbjct 1008 TAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGC 949 Query 174878 AGCTTCAGCAGTATTCCTAGTCTATCCTTTCGGTCAAGGTTCATTCTCAGACGCGATGCC 174937 ||| | || || ||| | | ||||| | |||||||| || || |||| ||||| Sbjct 948 TGCTACTGCTGTTTTCTTGATATATCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCC 889 Query 174938 CTTGGGTATCTCTGGAACATTCAACTACATGTTGGTCTTCCAAGCAGAACATAACATCTT 174997 | | || ||||| || || ||||||| |||| | || |||||||| || || |||||| | Sbjct 888 CCTAGGAATCTCCGGTACTTTCAACTTCATGATTGTATTCCAAGCCGAGCACAACATCCT 829 Query 174998 GATGCACCCCTTCCACATGTTGGGAGTCGCAGGTGTCTTCGGTGGTTCATTGTTCTCAGC 175057 |||||||| || |||||||| || || || ||||| ||||| || || | ||| || Sbjct 828 TATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGC 769 Query 175058 GATGCATGGTTCACTTGTTACCTCTTCACTTGTCCGTGAGACAACTGAAACTGAGTCACA 175117 |||||||| || | || |||||| | || | || || || |||| ||| || Sbjct 768 TATGCATGGGTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGC 709 Query 175118 GAACTATGGTTACAAGTTCGGCCAAGAAGAAGAGACCTATAACATCGTGGCAGCCCATGG 175177 || | ||||||| ||||| ||||| ||||| |||||||| ||||| || || ||||| Sbjct 708 TAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATCGTAGCCGCTCATGG 649 Query 175178 CTACTTCGGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCACGCTCACTCCACTT 175237 || || || || |||||||||||||| ||| |||||||| || || || | || || Sbjct 648 TTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTT 589 Query 175238 CTTCTTAGCCGCATGGCCAGTTGTGGGTATCTGGTTCACCGCACTTGGTGTTTCCACAAT 175297 |||| |||| || ||||| || || ||||||||||| ||||| | ||| | ||| || Sbjct 588 CTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCTTTAGGTATCAGCACTAT 529 Query 175298 GGCATTCAACCTCAATGGTTTCAACTTCAACCAGTCTGTTATCGACGGACAAGGTAGAGT 175357 ||| |||||| | |||||||| || ||||| || ||||| | || | || ||| | || Sbjct 528 GGCTTTCAACTTAAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTGT 469 Query 175358 ATTGAACACCTGGGCGGATGTTCTTAACAGAGCTGGTCTTGGGATGGAAGTAATGCATGA 175417 | | || || ||||| ||| || ||||| | ||| ||||| |||||||| |||||||| Sbjct 468 AATTAATACTTGGGCTGATATTATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGA 409 Query 175418 GAGAAATGCACACAACTTCCCACTAGATTTGGCAGCAGCTGA 175459 | ||||| || || ||||| |||||| | || || | ||| Sbjct 408 ACGTAATGCCCATAATTTCCCTCTAGATCTAGCTGCTGTTGA 367 Score = 434 bits (480), Expect = 2e-116 Identities = 701/1008 (70%), Gaps = 0/1008 (0%) Strand=Plus/Plus Query 175853 TGATATTTTGGAAGACTGGCTTCTCAGAGATAGGTTTATCTTTATTGGCTGGTCTGGATT 175912 ||||||| |||| |||||| | | || || | || | ||| | || |||||||| | Sbjct 34235 TGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGCCT 34294 Query 175913 ACTACTTCTTCCCACTGCTTATCTTGCCATTGGCGGCTGGCTTACTGGCACAACTTTTGT 175972 | | || |||| ||| ||| | || | || || ||| | || || ||||| ||||| Sbjct 34295 ATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGT 34354 Query 175973 CACGAGTTGGTACACCCATGGTCTTGCTTCTTCCTATCTTGAGGGTGCTAACTTTCTCAC 176032 || ||||| |||||||| | || ||||||| | || || |||||| | || Sbjct 34355 AACTTCATGGTATACCCATGGATTAGCAAGTTCCTATTTGGAAGGCTGTAACTTCTTAAC 34414 Query 176033 AGCGGCTGTCTCGACTCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCC 176092 || || || || ||||| ||| || | | | || ||| | | |||| |||||||| Sbjct 34415 CGCCGCAGTTTCCACTCCGGCTAATAGTTTAGCGCACTCTTTGTTGTTACTATGGGGTCC 34474 Query 176093 TGAATCTCAGGGCGACTTCCAGCGGTGGCTCCAACTTGGAGGGCTTTGGTCCTTTGTTGC 176152 |||| | || || || || || ||| ||| | || || || ||| | |||||||| Sbjct 34475 TGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTTTTGTTGC 34534 Query 176153 TCTCCACGGTGCCTTCGCTCTGATTGGATTCATGCTTCGTCAGTTTGAACTGGCAAGACT 176212 ||| ||||| || |||| || || || || ||| | ||||| |||||||| || || Sbjct 34535 TCTACACGGCGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATC 34594 Query 176213 CATTGGTATCCGTCCCTACAACGCTATTGCATTCAGTGGTCCTATCGCTGTATTTGTCAG 176272 || | || || || || || || |||||| ||||| || ||||| ||||| Sbjct 34595 TGTTCAATTGCGACCTTATAATGCAATCGCATTCTCCGGTCCAATTGCTGTTTTTGTTTC 34654 Query 176273 TGTGTTTCTTCTATACCCACTAGGTCAATCTTCCTGGTTCTTTGCCCCCTCCTTTGGTGT 176332 ||| || || | || || |||||||| ||| ||||| ||||| ||| |||||||| Sbjct 34655 TGTATTCCTAATTTATCCGCTAGGTCAGTCTGGTTGGTTTTTTGCGCCCAGTTTTGGTGT 34714 Query 176333 GGCAGCAATCTTTAGATTCCTATTGTTTCTTCAGGGTTTCCACAACTGGACACTGAACCC 176392 ||||| || ||| ||||| | | ||| | || || || || || |||||| ||||||| Sbjct 34715 AGCAGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCC 34774 Query 176393 CTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTACTATCTGCAATCCATGG 176452 || |||||||||||||||||||| | | || | || || ||| || || ||||| Sbjct 34775 ATTTCATATGATGGGAGTTGCTGGGGTGTTGGGCGCTGCTCTGTTATGCGCTATTCATGG 34834 Query 176453 CGTTACTGTTGAAAATACCCTATATGAAGATGGAGAACAGAACAACACCTTCACTGCGTT 176512 | ||| || |||||||| ||| ||||||||| || || || ||| ||| || Sbjct 34835 TGCTACCGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTT 34894 Query 176513 CGATTCCACGCAGGAGGAAGAGACCTATTCGATGGTTACTGCGAACCGCTTCTGGTCGCA 176572 | | || || | ||||| || ||||| ||||| || || |||||||| ||||| || Sbjct 34895 TAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCCCA 34954 Query 176573 AATCTTCGGGGTTGCGTTTAGTAATAAGCGTTGGCTTCACTTCTTTATGTTGTTTGTCCC 176632 |||||| |||||||| ||| ||||| |||||| | || ||||||||||| ||||| || Sbjct 34955 AATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACC 35014 Query 176633 TGTCATGGGTCTTTGGGTCTCAAGTATTGGCATCATTGGGCTTGCTCTTAATCTTCGTGC 176692 || | ||| | ||| | | |||| | | || || || ||||| || ||||| Sbjct 35015 AGTAACCGGTTTGTGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCCCTTAACCTACGTGC 35074 Query 176693 TTATGATTTTGTGAGCCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTTGAAACTTTCTA 176752 ||||| || || || || || | ||||| ||||||||||| ||||| |||||||| Sbjct 35075 CTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTA 35134 Query 176753 CACAAAGAACATCCTTCTTAACGAAGGACTAAGAGCATGGATGGCACCTGTGGATCAACC 176812 ||| || || || || | |||||||| | | || |||||||| || ||||| || Sbjct 35135 CACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCC 35194 Query 176813 ACATGAGTCATTTGTATTCCCAGAAGAAGTTCTACCTAGAGGTAACGC 176860 ||||| || ||||||| || || |||||||| | || ||||| Sbjct 35195 TCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGC 35242 >seq2 Length=30405870 Score = 482 bits (534), Expect = 3e-131 Identities = 688/963 (71%), Gaps = 4/963 (0%) Strand=Plus/Plus Query 174499 GTCTTTACGTCGGTTGGTTCGGTGTTCTAATGATTCCTACATTGTTAGCCGCAACTGTAT 174558 |||||||| | || ||||| |||||| | ||||| ||||| || || || ||||| | | Sbjct 16144602 GTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCACAACT-TCT 16144660 Query 174559 GTT-TCATTATCGCTTTCGTGGGTGCTCCCCCAGTGGACATCGACGGAATCCGTGAACCA 174617 || | ||||| ||||| | | ||| || ||||| || || || || || ||| |||| Sbjct 16144661 GTACTTATTATTACTTTCATTGCTGCACCTCCAGTAGATATTGATGGTATTCGTAAACCT 16144720 Query 174618 GTAGCTGGTTCACTCATGTATGGAAACAACATCATCTCTGGTGCAGTTGTTCCTAGTTCA 174677 || |||| || | | ||||||||||| || || |||||||| || |||||| || Sbjct 16144721 GTTTCTGGATCTTTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTACCTCT 16144780 Query 174678 AACGCAATCGGTCTACACTTCTACCCAATCTGGGAAGCAGCCACACTCGACGAATGGCTC 174737 || || ||| | ||||| ||||| || |||||||| || | | || |||||| | Sbjct 16144781 GCAGCTATAGGTATGCACTTTTACCCGATATGGGAAGCGGCTTCCGTTGATGAATGGTTA 16144840 Query 174738 TACAACGGTGGTCCTTTCCAACTAGTTGTCTTCCACTTCCTTATTGGTATCTACGCCTAT 174797 |||||||||||||||| ||||| |||| | |||||| ||||| | ||| Sbjct 16144841 TACAACGGTGGTCCTTATGAACTAATTGTTCTACACTTCTCACTTGGTGTAGCTTGCTAC 16144900 Query 174798 ATGGGACGTGAGTGGGAACTCTCTTATCGTTTAGGTATGAGACCTTGGATCTGTGTAGCA 174857 ||||| ||||||||||| | || ||| | |||| | | |||||||| ||| ||| Sbjct 16144901 ATGGGTCGTGAGTGGGAGATTAGTTTCCGTCTGGGTAGGCGCCCTTGGATTGCTGTTGCA 16144960 Query 174858 TACTCTGCACCAGTTGCAGCAGCTTCAGCAGTATTCCTAGTCTATCCTTTCGGTCAAGGT 174917 || || || || |||||||| ||| | || || ||| | | ||||| | |||||||| Sbjct 16144961 TATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATATATCCAATTGGTCAAGGA 16145020 Query 174918 TCATTCTCAGACGCGATGCCCTTGGGTATCTCTGGAACATTCAACTACATGTTGGTCTTC 174977 || || |||| ||| || | || ||||| || || ||||||| |||| | || ||| Sbjct 16145021 AGCTTTTCTGACGTAATGTCCCTAGGAATCTCCGGTACTTTCAACTTCATGATTGTATTC 16145080 Query 174978 CAAGCAGAACATAACATCTTGATGCACCCCTTCCACATGTTGGGAGTCGCAGGTGTCTTC 175037 ||||| | || |||||| | |||||||| || |||||||| || | || ||||| ||| Sbjct 16145081 CAAGCTAAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGCAGCCGGTGTATTC 16145140 Query 175038 GGTGGTTCATTGTTCTCAGCGATGCATGGTTCACTTGTTACCTCTTCACTTG-TCCGTGA 175096 || || || | ||| || |||||||| || |||| || | | | ||| || | || Sbjct 16145141 GGCGGCTCCCTATTCAGTGCTATGCATGGGTC-CTTGGTAACCCCTAGTTTGATCAGGGA 16145199 Query 175097 GACAACTGAAACTGAGTCACAGAACTATGGTTACAAGTTCGGCCAAGAAGAAGAGACCTA 175156 || | ||| ||| || || | ||||||| ||||| ||||| ||||| ||||| Sbjct 16145200 AACCATAAAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTA 16145259 Query 175157 TAACATCGTGGCAGCCCATGGCTACTTCGGTCGTTTGATCTTCCAATACGCTTCATTCAA 175216 ||| ||| | || || ||||| || || || || |||||||||||||| ||| ||||| Sbjct 16145260 TAATATCATAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAA 16145319 Query 175217 CAACTCACGCTCACTCCACTTCTTCTTAGCCGCATGGCCAGTTGTGGGTATCTGGTTCAC 175276 ||| || | || | || |||||| |||| || ||||| || || ||||||||||| || Sbjct 16145320 CAATTCTTGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTAC 16145379 Query 175277 CGCACTTGGTGTTTCCACAATGGCATTCAACCTCAATGGTTTCAACTTCAACCAGTCTGT 175336 | | | ||| | || ||||| |||||| | |||||||| || ||||| || ||||| Sbjct 16145380 CACTTTAGGTATCAGTACTATGGCTTTCAACTTAAATGGTTTTAATTTCAATCAATCTGT 16145439 Query 175337 TATCGACGGACAAGGTAGAGTATTGAACACCTGGGCGGATGTTCTTAACAGAGCTGGTCT 175396 | || | || ||| | ||| | || || ||||| ||| || ||||| | | | || Sbjct 16145440 AGTTGATAGTCAGGGTCGTGTAATTAATACTTGGGCTGATATTATTAACCGCGTTAACCT 16145499 Query 175397 TGGGATGGAAGTAATGCATGAGAGAAATGCACACAACTTCCCACTAGATTTGGCAGCAGC 175456 ||| |||||||| |||||||| | ||||| || || ||||| |||||| | || || | Sbjct 16145500 TGGTATGGAAGTTATGCATGAACGTAATGCTCATAATTTCCCTCTAGATCTAGCTGCTGT 16145559 Query 175457 TGA 175459 ||| Sbjct 16145560 TGA 16145562 >seq6 Length=30767194 Score = 86.0 bits (94), Expect = 9e-12 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 175304 CAACCTCAATGGTTTCAACTTCAACCAGTCTGTTATCGACGGACAAGGTAGAGTATTGAA 175363 ||| ||||||||||| || ||||| || ||||| | || | || ||| | ||| | || Sbjct 16007669 CAAACTCAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTGTAATTAA 16007610 Query 175364 CACCTGGGCGGATGTTCTTAACAGAGCTGGTCTTGGGATGGAAGTAATGCATGAGAGAAA 175423 || ||||| ||| || ||||| ||| ||||| ||||| || |||||||| | || Sbjct 16007609 TACTTGGGCTGATATTATTAACCACGCTAACCTTGGTATGGACGTTATGCATGAACGTAA 16007550 Query 175424 TGCACACAACTTCCCACTAGAT 175445 ||| || || |||| |||||| Sbjct 16007549 TGCTCATAATTTCCATCTAGAT 16007528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729927848168960