Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_027130.1 Length=172688 Score E Sequences producing significant alignments: (Bits) Value seq192 556 1e-153 seq2 468 6e-127 seq6 89.7 6e-13 >seq192 Length=157790 Score = 556 bits (616), Expect = 1e-153 Identities = 715/973 (73%), Gaps = 16/973 (2%) Strand=Plus/Minus Query 158406 AACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACC 158465 ||||| || || | || ||||| || || ||||||| || ||| | ||| | ||||| Sbjct 1331 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACT 1272 Query 158466 ATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGA 158524 ||||| || || | || ||| | ||||| || || || || || || || || ||||| Sbjct 1271 -TCTGTATTTATTATTGCTTTCATTGCTGCACCTCCAGTAGATATTGATGGTATTCGTGA 1213 Query 158525 ACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTACCATC 158584 ||| || |||| || | | ||||| ||||| || || |||||||| || | || | Sbjct 1212 ACCTGTTTCTGGATCTTTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTAC 1153 Query 158585 TTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTG 158644 || || || ||| | ||||| || || || |||||||| || || ||||||| || Sbjct 1152 CTCTGCAGCTATAGGTTTGCACTTTTACCCGATATGGGAAGCGGCTTCCGTTGATGAATG 1093 Query 158645 GCTGTATAACGGTGGTCCTTTCCAACTCGTAGTCTTTCACTTCCTTATCGGCAT--CTAT 158702 | | || ||||||||||||| |||| | || | |||||| | | || | || | Sbjct 1092 GTTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCT-T 1034 Query 158703 GCATATATGGGACGTGAATGGGAACTTTCATACCGCTTAGGTATGCGCCCCTGGATCTGT 158762 || || ||||| ||||| ||||||||| | ||| | ||||||||||| ||||| | Sbjct 1033 GC-TACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCT 975 Query 158763 GTAGCATATTCTGCACCAGTCGCTGCAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGT 158822 || |||||||| || || || || || || ||||||| ||| | | ||||| | ||| Sbjct 974 GTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATATATCCAATTGGT 915 Query 158823 CAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTT 158882 ||||| || || || | |||||| || || ||||| |||||||| |||| |||| || Sbjct 914 CAAGGAAGCTTTTCTGACGGTATGCCCCTAGGAATCTCCGGTACTTTCAACTTCATGATT 855 Query 158883 GTATTCCAAGCAGAACACAACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGCTGGG 158942 ||||||||||| || |||||||||||||||||||| || || ||| | || || ||||| Sbjct 854 GTATTCCAAGCCGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGT 795 Query 158943 GTATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTC--TCGTTACTTCCTCACTCG 159000 |||||||| || || || ||| |||||||||||| ||| | || || || | | | Sbjct 794 GTATTCGGCGGCTCCCTATTCAGTGCTATGCATGG--GTCCTTGGTAACCTC-TAGTTTG 738 Query 159001 TTC-GTGAAACGACTGAAACAGAGTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAA 159059 || | ||||| || |||| || || || | ||||||| ||||| ||||| ||| Sbjct 737 ATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAA 678 Query 159060 GAAACATATAATATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATACGCT 159119 ||||| ||||||||||| || || |||||||| || || || |||||||||||||| ||| Sbjct 677 GAAACCTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCT 618 Query 159120 TCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATC 159179 |||||||| || ||||| || || |||||||| ||||| |||||||| || || ||| Sbjct 617 AGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATC 558 Query 159180 TGGTTCACCGCCCTTGGCGTGTCA--ACCATGGCATTCAACCTGAACGGTTTCAACTTCA 159237 ||||| ||||| | || | ||| || ||||| |||||| | || ||||| || |||| Sbjct 557 TGGTTTACCGCTTTAGG--TATCAGCACTATGGCTTTCAACTTAAATGGTTTTAATTTCA 500 Query 159238 ACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGATGTACTGAACC 159297 | || || | ||||| ||||||||||||| | || || ||||| ||| | | |||| Sbjct 499 ATCAATCTGTAGTTGATAGTCAGGGTCGTGTAATTAATACTTGGGCTGATATTATTAACC 440 Query 159298 GTGCAGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGACC 159357 | || || |||||||||||||||||||| ||||| || || || ||||| || || | Sbjct 439 GCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCCCATAATTTCCCTCTAGATC 380 Query 159358 TTGCTGCTGCTGA 159370 | ||||||| ||| Sbjct 379 TAGCTGCTGTTGA 367 Score = 491 bits (544), Expect = 5e-134 Identities = 724/1020 (71%), Gaps = 4/1020 (0%) Strand=Plus/Plus Query 159899 TTTGACATACTCGACGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGCTGGTCTGGA 159958 ||||| || | || |||||| | |||| || ||||||||||| || |||||||| Sbjct 34233 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGC 34292 Query 159959 CTTCTTCTTCTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGAACAACTTTC 160018 || | || |||| ||| ||| | ||| | || |||||| | || || ||||| || Sbjct 34293 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 34352 Query 160019 GCAACGAGCTGGTATACCCATGGACTCGCTAGTTCCTATCTTGAGGGTGCAAACTTTCTT 160078 | ||| ||||||||||||||| | || ||||||||| | || || ||||| | Sbjct 34353 GTAACTTCATGGTATACCCATGGATTAGCAAGTTCCTATTTGGAAGGCTGTAACTTCTTA 34412 Query 160079 ACAGCGTCAGTTAGCACTCCAGCTGACGCTATGGGTCATTCTCTTCTTCTT-CTCTGGGG 160137 || || ||||| |||||| ||| | | | | || ||| || || || || ||||| Sbjct 34413 ACCGCCGCAGTTTCCACTCCGGCTAATAGTTTAGCGCACTCT-TTGTTGTTACTATGGGG 34471 Query 160138 TCCTGAGGCTCAAGGGGATTTCGTCAGGTGGATCCAACTTGGGGGACTCTGGAATTTTGT 160197 |||||| || ||||| ||||| | ||| ||| | || || || |||| |||||| Sbjct 34472 TCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTTTTGT 34531 Query 160198 GGCACTCCATGGTGCCTTCGCCCTAATTGGATTCATGCTCCGTCAGTTTGAACTGGCACG 160257 || || || || || |||| ||||| || || ||| | ||||| |||||||| || || Sbjct 34532 TGCTCTACACGGCGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCG 34591 Query 160258 -TCTCATCGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTCTTTG 160316 ||| || | | || ||||| ||||| || || ||||| ||||| |||||||| |||| Sbjct 34592 ATCTGTTCAAT-TGCGACCTTATAATGCAATCGCATTCTCCGGTCCAATTGCTGTTTTTG 34650 Query 160317 TCAGCGTATTCCTCATCTACCCATTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTG 160376 | |||||||| || || || | |||||||| |||||||||| || || |||| Sbjct 34651 TTTCTGTATTCCTAATTTATCCGCTAGGTCAGTCTGGTTGGTTTTTTGCGCCCAGTTTTG 34710 Query 160377 GGGTGGCAGCAATCTTTAGATTCCTGTTGTTCCTTCAAGGATTTCACAACTGGACGCTTA 160436 | || ||||| || ||| ||||| | | || | ||||| ||||| || ||||| | | Sbjct 34711 GTGTAGCAGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGA 34770 Query 160437 ACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGAGGAGCACTGCTCAGTGCCATCC 160496 |||| || |||||||||||||||||||| | | || | || ||| | | || || | Sbjct 34771 ACCCATTTCATATGATGGGAGTTGCTGGGGTGTTGGGCGCTGCTCTGTTATGCGCTATTC 34830 Query 160497 ATGGCGTTACTGTAGAGAACACACTGTATGAAGATGGAGAACAAGCAAATACCTTTAAGG 160556 |||| | ||| ||||| || || | | ||||||||| || |||||||| || | Sbjct 34831 ATGGTGCTACCGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTG 34890 Query 160557 CGTTTGATTCGACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGT 160616 | ||| | | || || | ||||| |||||||| |||||||| || |||||||| |||| Sbjct 34891 CTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGT 34950 Query 160617 CGCAGATCTTCGGTATTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTG 160676 | || ||||| || |||| ||||| || || || ||| | ||||| || ||||| |||| Sbjct 34951 CCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTG 35010 Query 160677 TGCCTGTTATGGGTCTTTGGACATCCAGTATTGGCATTATTGGTCTTGCTCTCAATCTTC 160736 | || || | ||| | |||| | |||| | | ||||| || || || || | Sbjct 35011 TACCAGTAACCGGTTTGTGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCCCTTAACCTAC 35070 Query 160737 GTGCTTACGATTTCGTGAGTCAAGAGATTAGAGCAGCAGAAGATCCAGAATTTGAGACCT 160796 |||| || || ||||| ||| || || | ||||| |||||||| ||||||||||| | Sbjct 35071 GTGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTT 35130 Query 160797 TCTACACCAAGAACATCCTACTGAATGAAGGACTACGTGCATGGTTAGCACCTGCCGACC 160856 |||||||||| || || || | || ||||| | ||||| ||| | || || || | Sbjct 35131 TCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATC 35190 Query 160857 AACCCCATGAGAACTTTATCTTCCCAGAAGAAGTTCTTCCTAGAGGCAACGCCCTTTAAT 160916 | || ||||| ||| |||| ||||| || || ||||| || | || ||||| ||||||| Sbjct 35191 AGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAAT 35250 >seq2 Length=30405870 Score = 468 bits (518), Expect = 6e-127 Identities = 685/957 (72%), Gaps = 14/957 (1%) Strand=Plus/Plus Query 158421 GGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACCATCTGTT-TCATCGT 158479 || ||||| || || ||||||| || ||| | ||| | |||| ||||| | || | Sbjct 16144613 GGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCACAACT-TCTGTACTTATTAT 16144671 Query 158480 CGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTC 158539 | ||| | ||||| || || || || || || || || ||| |||| || |||| || Sbjct 16144672 TACTTTCATTGCTGCACCTCCAGTAGATATTGATGGTATTCGTAAACCTGTTTCTGGATC 16144731 Query 158540 ACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTACCATCTTCCAACGCAATTGG 158599 | | ||||| ||||| || || |||||||| || | || | || || || || Sbjct 16144732 TTTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTACCTCTGCAGCTATAGG 16144791 Query 158600 TCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGG 158659 | | ||||| || || || |||||||| || || ||||||| ||| | || |||||||| Sbjct 16144792 TATGCACTTTTACCCGATATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAACGGTGG 16144851 Query 158660 TCCTTTCCAACTCGTAGTCTTTCACTTCCTTATCGGCAT--CTATGCATATATGGGACGT 158717 ||||| |||| | || | |||||| | || | || ||| || ||||| ||| Sbjct 16144852 TCCTTATGAACTAATTGTTCTACACTTCTCACTTGGTGTAGCT-TGC-TACATGGGTCGT 16144909 Query 158718 GAATGGGAACTTTCATACCGCTTAGGTATGCGCCCCTGGATCTGTGTAGCATATTCTGCA 158777 || ||||| || | ||| | |||| |||||| ||||| ||| |||||||| || Sbjct 16144910 GAGTGGGAGATTAGTTTCCGTCTGGGTAGGCGCCCTTGGATTGCTGTTGCATATTCAGCT 16144969 Query 158778 CCAGTCGCTGCAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCC 158837 || || || || || ||||||| ||| | | ||||| | |||||||| || || Sbjct 16144970 CCTGTTGCAGCTGCTACTGCTGTTTTCTTGATATATCCAATTGGTCAAGGAAGCTTTTCT 16145029 Query 158838 GATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAA 158897 || | ||| | || || ||||| |||||||| |||| |||| ||||||||||||| | Sbjct 16145030 GACGTAATGTCCCTAGGAATCTCCGGTACTTTCAACTTCATGATTGTATTCCAAGCTAAG 16145089 Query 158898 CACAACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCT 158957 |||||||||||||||||||| || || ||| | || | || || |||||||| || || Sbjct 16145090 CACAACATCCTTATGCACCCATTTCACATGTTAGGCGCAGCCGGTGTATTCGGCGGCTCC 16145149 Query 158958 CTTTTCTCTGCTATGCATGGAAGT-CTCGTTACTTCCTCACTCGTTC-GTGAAACGACTG 159015 || ||| |||||||||||| || || | || ||| | | || | ||||| | Sbjct 16145150 CTATTCAGTGCTATGCATGG--GTCCTTGGTAACCCCTAGTTTGATCAGGGAAACCATAA 16145207 Query 159016 AAACAGAGTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAACATATAATATCG 159075 ||| || || || | ||||||| ||||| ||||| |||||||| ||||||||| Sbjct 16145208 AAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATCA 16145267 Query 159076 TCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCC 159135 | || || |||||||| || || || |||||||||||||| ||| |||||||| || Sbjct 16145268 TAGCCGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTT 16145327 Query 159136 GTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTG 159195 |||| || || |||||||| ||||| |||||||| || || |||||||| || | ||| Sbjct 16145328 GTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTAC--CACTTT 16145385 Query 159196 GCGTGTCA--ACCATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGA 159253 || ||| || ||||| |||||| | || ||||| || ||||| || || | |||| Sbjct 16145386 AGGTATCAGTACTATGGCTTTCAACTTAAATGGTTTTAATTTCAATCAATCTGTAGTTGA 16145445 Query 159254 TGGTCAGGGTCGTGTGTTGAACACCTGGGCAGATGTACTGAACCGTGCAGGTCTGGGTAT 159313 | ||||||||||||| | || || ||||| ||| | | ||||| | || ||||| Sbjct 16145446 TAGTCAGGGTCGTGTAATTAATACTTGGGCTGATATTATTAACCGCGTTAACCTTGGTAT 16145505 Query 159314 GGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGACCTTGCTGCTGCTGA 159370 ||||||||||||||| ||||| || || || ||||| || || || ||||||| ||| Sbjct 16145506 GGAAGTTATGCATGAACGTAATGCTCATAATTTCCCTCTAGATCTAGCTGCTGTTGA 16145562 >seq6 Length=30767194 Score = 89.7 bits (98), Expect = 6e-13 Identities = 70/84 (83%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 159036 GGTTACAAGTTCGGACAAGAAGAAGAAACATATAATATCGTCGCAGCCCATGGTTACTTC 159095 ||||||| ||||| ||||| |||||||| |||||||| || || || |||||||| || Sbjct 12498437 GGTTACATATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGCCGCTCATGGTTATTTT 12498378 Query 159096 GGTCGTTTGATCTTCCAATACGCT 159119 || || |||||||||||||| ||| Sbjct 12498377 GGCCGATTGATCTTCCAATATGCT 12498354 Score = 87.8 bits (96), Expect = 2e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 159215 CAACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAA 159274 ||| || || ||||| || ||||| || || | ||||| ||||||||||||| | || Sbjct 16007669 CAAACTCAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTGTAATTAA 16007610 Query 159275 CACCTGGGCAGATGTACTGAACCGTGCAGGTCTGGGTATGGAAGTTATGCATGAGCGTAA 159334 || ||||| ||| | | |||| || || |||||||| ||||||||||| ||||| Sbjct 16007609 TACTTGGGCTGATATTATTAACCACGCTAACCTTGGTATGGACGTTATGCATGAACGTAA 16007550 Query 159335 CGCACACAACTTCCCACTCGACCTTGCTGCTGCTGA 159370 || || || |||| || || | ||| ||| ||| Sbjct 16007549 TGCTCATAATTTCCATCTAGATGTAGCTTCTGTTGA 16007514 Score = 86.0 bits (94), Expect = 7e-12 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 159036 GGTTACAAGTTCGGACAAGAAGAAGAAACATATAATATCGTCGCAGCCCATGGTTACTTC 159095 ||||||| ||||| ||||| |||||||| ||| |||| || || || |||||||| || Sbjct 12498661 GGTTACATATTCGGTCAAGAGGAAGAAACCTATTATATTGTAGCCGCTCATGGTTATTTT 12498602 Query 159096 GGTCGTTTGATCTTCCAATACGCTTCA 159122 || || |||||||||||||| ||| || Sbjct 12498601 GGCCGATTGATCTTCCAATATGCTACA 12498575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552472274063360