Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq6 127 3e-24 seq8 98.7 1e-15 seq3 95.1 2e-14 >seq6 Length=30767194 Score = 127 bits (140), Expect = 3e-24 Identities = 162/223 (73%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 69750 TCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACC 69809 ||| || ||||| | || | || || | |||| | |||| || ||| |||| ||| || Sbjct 14680463 TCCCCCTTGATCAACATAACGAGCTGTATCATTAAAAACTCGCAACATTGGAACAATGCC 14680522 Query 69810 ATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGA 69869 ||| ||| | |||||||||||| |||||| || ||| | || ||||| || || ||| Sbjct 14680523 ATTGGATGTCCCATTTGTTCCACGAATATAGCTGCCTGTGGCACGAATGTTGTGAACAGA 14680582 Query 69870 TAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATAT 69929 | ||| |||||||| ||| ||| ||| | |||||| ||||| || ||||| || Sbjct 14680583 GACACCAATTCCTCCAGCCGATTTGCTGATAACAGCACATTCCTTCAAAGTATCATAAAT 14680642 Query 69930 ACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTA 69972 || || |||||||||||| ||||| || || || |||||| Sbjct 14680643 GCCTTCAATGCTATCATCTTTCATGCAAACGAGGAAGCAGCTA 14680685 >seq8 Length=22573980 Score = 98.7 bits (108), Expect = 1e-15 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 69496 TCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACAT 69555 |||||||| || || | | || |||| ||||||||||||||| | || |||||| Sbjct 3581199 TCATATTGGGTGTACAACTTCTCAAATTTTTCTCCCCAAACATCAGCTAAGCCAGGAGCC 3581140 Query 69556 TCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCG 69615 ||||||||||| | ||| ||||| ||||| | | |||| || ||| || ||||| Sbjct 3581139 TCATTTGGACAAAACAAAGACCATTGCCCATCACCTTGGACTCTTTCCATGAAGAGATCA 3581080 Query 69616 GGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTC 69659 |||||||| ||||| ||| ||||||| | | || |||||| Sbjct 3581079 GGAATCCAGAGAGCATAAAATAGATCTCGAGCCCGATGTTCTTC 3581036 Score = 91.5 bits (100), Expect = 2e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 69990 AGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATT 70049 |||||| |||| || | || |||| || ||| ||||||| | || | || || Sbjct 3580290 AGTTCCTCCATTGAAAAGGGTCGGAGTAGCATGAATGAACCAACGCTGGGACATCAAATG 3580231 Query 70050 GTATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAA 70109 ||| |||| | ||| || || || || || || || || | | || | |||||| Sbjct 3580230 GTAGGTTTGGAGAGCAGACTCGATGTCATCCTTGTGTATACCAACAGAAACCCTCATCAA 3580171 Query 70110 CATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAG 70169 ||| ||||| || | ||| || | || | ||||| || || ||||| || | || || Sbjct 3580170 CATGTGCTGCGGCCTTTCCACAATCTTCTCATTTACCTTTAAAAGGTAGGACCTCTCTAG 3580111 Query 70170 AGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 70217 ||||||||| ||||| |||| || |||||||||||| ||||| || Sbjct 3580110 AGTTTTAAAACCAAAGTAGTCATAATCAAAGTCTCTTTCATAAATGAT 3580063 >seq3 Length=27368013 Score = 95.1 bits (104), Expect = 2e-14 Identities = 232/344 (67%), Gaps = 6/344 (2%) Strand=Plus/Minus Query 39614 AAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTG 39673 ||||| |||||||| || || | |||||||||| ||||| ||||| || || || Sbjct 26803536 AAGCACGCGAAGTCGCAGTGCAAACCCTCATCTCGCGAGATTAACTCGTTTGAGAACGTC 26803477 Query 39674 AGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGAT-CCAGAAAA 39732 ||||| ||||||| || ||||| || ||||||||||| || |||||| | || || || Sbjct 26803476 AGTCCCGGCATTAACCCGCGCTTCTTTAGCCAAAATATCGC-GCAAAAACTGCCCGAGAA 26803418 Query 39733 GAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCG-TAACTTGTATCA-TTA 39790 ||| || ||||| || ||||| || || | || | ||||| ||| | | | Sbjct 26803417 GAATATCCCTTCCACGCAAGCAAAGGCCACGA-TC-CGCTCCGCAAACGATTCTGAGCCG 26803360 Query 39791 TGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCA 39850 | ||||| | ||||| | || |||||| | || || || || || || || || Sbjct 26803359 TCGATCCAGCGTAGGGCCCACTGGGCCTTCTTCGTGACGCAGGGAATGGTATCGATGGCG 26803300 Query 39851 TTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATAC 39910 | ||| || | || || || || || | || || || | | || || ||| Sbjct 26803299 TGAAAAAGCCTGTTCTTCTCGTCCGAGTCCTTGATGTAGGTCTCCAGAAGGAGGCTGTAC 26803240 Query 39911 ATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAA 39954 || || || |||||||| || || || ||||| || ||||| || Sbjct 26803239 ATCTCGGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAA 26803196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686907151418880