Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq4 91.5 1e-13 seq2 86.0 5e-12 seq6 82.4 6e-11 >seq4 Length=25843236 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || |||| || | ||||| || | || || || |||||||||||||||||| Sbjct 12760834 CCACCACGCAGACGGAGCACCAAGTGCAGGGTCGACTCCTTTTGAATATTGTAGTCGGCA 12760893 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | | | || || ||||| || || || | || | | ||| || || || || Sbjct 12760894 AGGGTCCTTCCATCCTCCAGCTGCTTGCCTGCAAATATCAACCTCTGCTGGTCTGGAGGG 12760953 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | |||||| || || ||| ||| |||| | || | ||| |||| | ||| ||| Sbjct 12760954 ATACCCTCCTTGTCCTGGATTTTGGCCTTCACATTGTCAATAGTATCTGAGCTTTCCACT 12761013 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || | ||| || | || || |||| |||||||||||||||||||||| Sbjct 12761014 TCCAAAGTAATCGTCTTCCCAGTCAAAGTTTTCACAAAGATTTGCATA 12761061 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || |||| || | |||||||| | || || || || || || |||||||| Sbjct 1215039 CCACCACGCAGACGGAGCACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAGTCTGCG 1215098 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | || |||| || ||||| || |||||| | ||||||||||| || || || || Sbjct 1215099 AGGGTACGGCCGTCCTCTAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCTGGAGGG 1215158 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || |||||| || | | | || | ||||| | | || || Sbjct 1215159 ATGCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCGATGGTGTCAGATGACTCCACC 1215218 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || | ||||| || || |||||||| ||||||||||| Sbjct 1215219 TCAAGGGTGATGGTCTTGCCGGTAAGGGTTTTCACGAAGATTTGCAT 1215265 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || |||| ||| | |||||||| | || || |||||||| || || ||||| Sbjct 12721660 CCACCACGCAGCCGGAGCACCAAATGCAGAGTCGATTCTTTTTGGATGTTATAGTCAGCA 12721601 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | |||| | || || ||||| |||||||| | ||||| | ||| || || || || Sbjct 12721600 AGGGTGCGTCCATCCTCAAGCTGCTTACCGGCAAAGATGAGCCTCTGCTGGTCTGGGGGA 12721541 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || |||||| || | | || | || || | | ||||||| Sbjct 12721540 ATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTGTCAATGGTATCCGAGCTTTCAACT 12721481 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || | || || | || || || || || || ||||||||||||||| Sbjct 12721480 TCCAAGGTGATTGTCTTCCCAGTAAGGGTCTTAACAAAGATTTGCATA 12721433 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || |||| ||| | ||||| || | || || || |||||||| || ||||| Sbjct 12721888 CCACCACGCAGCCGGAGCACCAAGTGCAGAGTGGACTCCTTTTGAATGTTATAGTCAGCA 12721829 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | | | || |||||||| || || || | || | | ||| || || || || Sbjct 12721828 AGGGTCCTTCCATCCTCGAGCTGCTTGCCTGCAAAGATCAACCTCTGCTGGTCTGGGGGA 12721769 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | |||||| || || ||| ||| || | | || | ||| || | | ||| ||| Sbjct 12721768 ATACCCTCCTTGTCCTGGATTTTGGCCTTAACATTATCAATAGTATCAGAGCTTTCCACT 12721709 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || ||||| || | ||| || ||||||||||||||||| || |||||| Sbjct 12721708 TCCAGAGTAATGGTTTTCCCGGTCAGAGTTTTCACAAATATCTGCATA 12721661 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || |||| || | ||||| || | || || || |||||||| |||||||| Sbjct 12722116 CCACCACGCAGTCGAAGCACCAAGTGCAGAGTGGACTCCTTTTGAATGTTGTAGTCAGCA 12722057 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | | | || |||||||| || || || | || | | ||| || || || || Sbjct 12722056 AGGGTCCTTCCATCCTCGAGCTGCTTGCCTGCAAAGATCAACCTCTGCTGGTCTGGGGGA 12721997 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | |||||| || || ||| ||| || | | || | ||| || | | ||| ||| Sbjct 12721996 ATACCCTCCTTGTCCTGGATTTTGGCCTTAACATTATCAATAGTATCAGAGCTTTCCACT 12721937 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || ||||| || | ||| || ||||||||||||||||| || |||||| Sbjct 12721936 TCCAGAGTAATGGTTTTCCCGGTCAGAGTTTTCACAAATATCTGCATA 12721889 >seq2 Length=30405870 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 ||||| ||||| || || || || || || | | || |||| || || || || || Sbjct 22653263 GTAGACTCTTTCTGGATGTTATAATCAGCCAGGGTACGTCCGTCCTCAAGTTGCTTCCCA 22653322 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || ||||||| | ||| |||||||| || | ||||||||| || ||| || |||| Sbjct 22653323 GCAAAAATGAGCCTCTGCTGATCCGGAGGGATACCCTCTTTGTCTTGGATTTTAGCTTTC 22653382 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | || || | | ||||| || ||||| || | || |||||||||||| Sbjct 22653383 ACATTGTCAATTGTATCGGAACCCTCAACATCAAGAGTGATTGTCTTCCCCGTCAGAGTT 22653442 Query 27231 TTCACAAAGATTTGCAT 27247 | ||||| || ||||| Sbjct 22653443 TCAACAAAAATCTGCAT 22653459 >seq6 Length=30767194 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || || || || || ||||| || ||||||||| | | | || |||| || Sbjct 23848402 ACCAAGTGCAAAGTCGATTCCTTTTGGATGTTGTAGTCGGCGAGGGTTCGGCCGTCCTCC 23848343 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 | || || ||||| |||| | | ||| || || || || | ||||| || || | Sbjct 23848342 AATTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGTGGGATGCCCTCCTTGTCTTGG 23848283 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 |||||| |||| | | || | || || | | || |||||||| ||||| | || Sbjct 23848282 ATCTTGGCCTTCACGTTGTCGATGGTATCAGAGCTCTCGACTTCTAGGGTTATGGTCTTC 23848223 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || ||||| || |||||||||||| Sbjct 23848222 CCGGTTAGGGTTTTGACGAAGATTTGCATA 23848193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424933405653504