Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq3 89.7 6e-13 seq1 89.7 6e-13 >seq3 Length=27368013 Score = 89.7 bits (98), Expect = 6e-13 Identities = 176/257 (68%), Gaps = 10/257 (4%) Strand=Plus/Minus Query 14095 GTCAAGGATATCAATGCGGTTCGTCGCCGCGATGACAACGATGCCCGTCTCGTTATCAAA 14154 |||||| || || | ||| ||||| || | |||| ||| || || | | ||||| Sbjct 9413064 GTCAAGAATGTCTGCCCTGTTAGTCGCTGCAACCACAATGATACCAGTGTTGCCCTCAAA 9413005 Query 14155 GCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCAGGCAT 14214 |||||||| || ||||| || ||||| | ||||||||| | ||||||||| | | Sbjct 9413004 ACCATCCATTTCTGTCAAAAGCTGATTAAGGGTTTGTTCTCTTTCATCATTTCC---CCC 9412948 Query 14215 ACCA---CCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACA 14271 |||| || | | | |||| || || || ||||||||||| | || || || || Sbjct 9412947 ACCAATTCCAGTTCCTCTTTGCCGTCCAACAGCATCAATTTCATCAACAAATACAATGCA 9412888 Query 14272 TGGTTGATTTTCACGGGCAACTTC--AAAGATATCTCGCACTCTCTTGGCACCGACACCC 14329 ||| ||| || ||| |||| ||| | ||| || |||| ||||| ||||| Sbjct 9412887 AGGTGCATTCTCTTTGGC--CTTCTTAAAAAGATCACGAACTCGGGAAGCACCAACACCA 9412830 Query 14330 ACAAACATCTCCACAAA 14346 |||||||| || ||||| Sbjct 9412829 ACAAACATTTCAACAAA 9412813 >seq1 Length=47851208 Score = 89.7 bits (98), Expect = 6e-13 Identities = 194/283 (69%), Gaps = 12/283 (4%) Strand=Plus/Plus Query 14152 AAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCAGG 14211 ||||||||||||||| ||||| || ||||| ||||| || || | ||||||||| || Sbjct 32999678 AAAGCCATCCATCTCCGTCAACAGCTGATTAATGGTCTGCTCCCTCTCATCATTCCCA-- 32999735 Query 14212 CATACC--ACCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATA 14269 | | || ||| || | | ||| | || || || ||||| || || ||||| || || Sbjct 32999736 CCTCCCATACCTGCTCCTCTCTGCCTCCCCACTGCATCAATCTCGTCAATGAACACAATG 32999795 Query 14270 CATGGTTGATTTTCAC-GGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACACC 14328 || || | ||| || ||| || || | || ||||||||| ||||| || || Sbjct 32999796 CACGG-CGCTTTCGACTTGGCCTTCTCGAACAAGTCCCGCACTCTCGACGCACCCACTCC 32999854 Query 14329 CACAAACATCTCCACAAAAT-TG--GCGGCGGAACATTGGATGAAGGGGACGTTAGATTC 14385 |||||||| ||||| || | || || ||| || | || || || || || || Sbjct 32999855 CACAAACAATTCCACGAACTCTGAAGCTGCGCAAGA---GAAAAACGGCACCCCAGCCTC 32999911 Query 14386 ACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTGGT 14428 || || | ||| || || || |||||||| || || || ||| Sbjct 32999912 GCCGGCCACGGCCCGAGCCAGAAGGGTCTTGCCGGTACCAGGT 32999954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618433715755520