Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq3 152 6e-32 >seq3 Length=27368013 Score = 152 bits (168), Expect = 6e-32 Identities = 366/543 (67%), Gaps = 8/543 (1%) Strand=Plus/Plus Query 59574 TACCCGGATCTGTGGGCCCTGTATAAGAAAGCGATCGGTTCATTCTGGTCCGTCGAGGAG 59633 |||||||| | |||| |||| ||||| || | || |||||| ||| ||||||| Sbjct 26802974 TACCCGGAAATCTGGGAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACCGCCGAGGAG 26803033 Query 59634 ATTGACCTC-GCCGGAGACCTGAAGGATTGGGACAAGCTCAATTACGACGAGCAGCATTT 59692 |||| ||| ||| | ||||| ||||||| | || | | |||| |||| || Sbjct 26803034 GTTGATCTCTGCCAG-GACCTACGCCATTGGGAAACTCTAACCCCTGGCGAGAAGCACTT 26803092 Query 59693 CATCAAGATGGTCCTGGCCTTCTTCGCGGCGAGTGATGGAATTGTGATGGAAAATATAGA 59752 ||||| || || ||||||||||| || ||| || || || |||| ||| | | Sbjct 26803093 CATCACCCACGTGCTCGCCTTCTTCGCTGCCTCTGACGGCATCGTTTTGGAGAATCTTGC 26803152 Query 59753 CATGAACTTTTCCAAGGATGTCCAGATTGCCGAGGCCCGGTCGTTCTACGCGTATCAG-T 59811 | | || ||||| |||||| | ||||||| || | ||||||| | ||| | Sbjct 26803153 CGGAAGGTTCATGAAGGAAGTCCAGGTCTCCGAGGCTCGCGCCTTCTACGGCTTCCAGAT 26803212 Query 59812 CGTTCAACGAGTCTATCCACTCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGG 59871 || || |||| ||||||||||||| |||| ||| | | || | | |||||| Sbjct 26803213 CGC-CATCGAGAACATCCACTCCGAGATGTACAGCCTCCTTCTGGAGACCTACATCAAGG 26803271 Query 59872 ATCCGGAAGAGAAGGCTGGTCTGTTCCGTGCCATAGAGACG-TCCCCCGCAGTTAAACAA 59930 | |||| |||||| | || || | ||||| || || | ||| || || | | Sbjct 26803272 ACTCGGACGAGAAGAACAGGCTTTTTCACGCCATCGATACCATTCCCTGC-GTCACGAAG 26803330 Query 59931 AAAGCAGAATGGGCCATGCAGTGGAT-GAGTCCTGGAGCATCATTTGCACAACGTCTCAT 59989 || || | |||||| | | ||||| || || || ||| ||||| | || || | Sbjct 26803331 AAGGCCCAGTGGGCCCTACGCTGGATCGACGGCTC-AGAATCGTTTGCGGAGCGGATCGT 26803389 Query 59990 AGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCT 60049 || ||||| ||||||||||| || |||||||| ||| || || || || || ||||| Sbjct 26803390 GGCCTTTGCTTGCGTGGAAGGGATATTCTTCTCGGGCAGTTTTTGCGCGATATTTTGGCT 26803449 Query 60050 CAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGA 60109 || ||||| || | |||||||| |||| ||||| |||||| | || || || || || Sbjct 26803450 AAAGAAGCGCGGGTTAATGCCGGGACTGACGTTCTCAAACGAGTTAATCTCGCGAGATGA 26803509 Query 60110 GGG 60112 ||| Sbjct 26803510 GGG 26803512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548523483540480