Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq3 113 5e-20 seq1 89.7 6e-13 seq7 86.0 7e-12 >seq3 Length=27368013 Score = 113 bits (124), Expect = 5e-20 Identities = 532/825 (64%), Gaps = 44/825 (5%) Strand=Plus/Minus Query 74463 TAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATC 74522 || || || |||| ||| || || || ||||||||||| | || ||| ||||||| Sbjct 26803818 TACTCCCCAACCCTCTTCTCGAAGAAATTGGTCTTCCCCTGCAGGCTGATCAGCTCCATC 26803759 Query 74523 CAGTCGAAAGGGTTCTTTGCACCGTAAATAGGCTTC---TCCCCAAACTGTGCCATGAGG 74579 || ||||| ||||||| || |||||| |||| | ||||| || ||| || Sbjct 26803758 CAATCGAACGGGTTCTGCACATTGTAAAT---CTTCGAGTACCCAAGCTCACCCAGCAGC 26803702 Query 74580 CGATCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGATGAGTTTG 74639 | ||||||||| || | |||||||| |||| | | | ||| || | || | Sbjct 26803701 CTATCCGCCACGAACTCGATGTACTGGCTCATCAGATCGCCGTTCATCCCCACTAGGGCG 26803642 Query 74640 CACGGCAGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCCCATTGGACAATCTTG 74699 ||||| | || ||| | ||||| ||||| | ||| | | | || || | Sbjct 26803641 CACGGTAAGGCTTCGCACACGAACTCTCTCTCTATCTCC--ACCGCGTT------TCGTA 26803590 Query 74700 TGAATGTCTT---TGGAA----GGGCA-CTTTTCCCTCAGGTGAGAGTAAAGCGT-CACG 74750 ||| | ||| | || | || ||| | |||||| | ||||| ||| |||| Sbjct 26803589 TGATCGACTTCACTCGATCCTCGCTCAGCTTCTTCCTCAGCAGCGAGTACAGCAAGCACG 26803530 Query 74751 GCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCA 74810 | || || ||| | || ||||||| || || || || || |||| || || Sbjct 26803529 -CGAAGTCGCAGTGCAAACCCTCATCTCGCGAGATTAACTCGTTTGAGAACGTCAGTCCC 26803471 Query 74811 GGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATG 74870 ||||| | || |||||||| | |||||| || || || || || |||||| || Sbjct 26803470 GGCATTAACCCGCGCTTCTTTAGCCAAAATATCGCGCAAAAACTGCCCGAGAAGAATATC 26803411 Query 74871 CCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTC-ATCCA 74929 ||||| || || |||||||| || | || | ||| |||| | | | | ||| ||||| Sbjct 26803410 CCTTCCACGCAAGCAAAGGCCACGATCCGCTCCGCAAACGATTC-TGAGCCGTCGATCCA 26803352 Query 74930 AGTCTGAGCCCATTCAGCTTT--TCGTTTGACCGCAGGGACAG-TATCGATCGCTTGGAA 74986 | ||||| | || || |||| ||| ||||||| | ||||||| || || || Sbjct 26803351 GCGTAGGGCCCACTGGGCCTTCTTCGT--GAC-GCAGGGAATGGTATCGATGGCGTGAAA 26803295 Query 74987 GAGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTC 75046 || || |||||| || | ||||||| | | || | | || |||| |||| Sbjct 26803294 AAGCCTGTTCTTCTCGTCCGAGTCCTTGATGTAGGTCTCCAGAAGGAGGCTGTACATCTC 26803235 Query 75047 CGAATGAATCGACTCGTTGAACGA-CTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCT 75105 || || || |||| || ||| |||| | ||||||| | || ||||| | | || Sbjct 26803234 GGAGTGGATGTTCTCGATGG-CGATCTGGAAGCCGTAGAAGGCGCGAGCCTCGGAGACCT 26803176 Query 75106 GTACATCCTT--TGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGC 75163 | || ||||| |||| | | | | | |||||||| ||||||||||| ||||| || Sbjct 26803175 GGACTTCCTTCATGAACCTTCC--GGCAAGATTCTCCAAAACGATGCCGTCAGAGGCAGC 26803118 Query 75164 GAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCGTCA---GTGAGTTTGTCCCA 75220 ||| || || || || |||| |||| ||| ||| || || || | ||||| Sbjct 26803117 GAAGAAGGCGAGCACGTGGGTGATGAAGT---GCTTCTCGCCAGGGGTTAGAGTTTCCCA 26803061 Query 75221 ATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAA 75265 || |||||| | ||||| ||||||| | |||||||| Sbjct 26803060 ATGGCGTAGGTCCTGGCAGAGATCAACCTCCTCGGCGGTCCAGAA 26803016 >seq1 Length=47851208 Score = 89.7 bits (98), Expect = 6e-13 Identities = 66/76 (87%), Gaps = 1/76 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 28529263 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 28529322 Query 79684 TGAGCTACGAAAGCAA 79699 ||||||| |||||||| Sbjct 28529323 TGAGCTATGAAAGCAA 28529338 >seq7 Length=22388614 Score = 86.0 bits (94), Expect = 7e-12 Identities = 132/188 (70%), Gaps = 3/188 (2%) Strand=Plus/Plus Query 124710 GACTCGTGGTTGAACAGAATGCCAGTACACGCAAACATCCCGTACGACTCGCGGTAGTTT 124769 ||||||||||||||||| || ||| ||||||| |||| |||||| | |||||| ||||| Sbjct 17035983 GACTCGTGGTTGAACAGTATCCCATTACACGCGAACAGCCCGTAGGCCTCGCGATAGTTG 17036042 Query 124770 TTCGTCATCCAATACCCAAAGAGCTTGGACACGCCATAGGGGCTTCGGGGGTAGAATGGG 124829 ||| ||||| | | | || || || | |||||| |||||||| || || Sbjct 17036043 ACCGTGTACCAATGCGCCGCGCATTTCGAAACAGCGTAGGGGGATCGGGGGTGAAACGGC 17036102 Query 124830 GTGTTTTCATTTTGGGTAGGTTGCTGAATCTTCCCAAACATCTCCGAAGTACCCGCCTGA 124889 || | || ||| | || || | || ||| ||||||||||| | || ||||| Sbjct 17036103 GTCGTCTCCGATTGCGGAG---GCGGGGTCGCCCCGAACATCTCCGACGACCCGGCCTGG 17036159 Query 124890 TAGAATTT 124897 ||| |||| Sbjct 17036160 TAGTATTT 17036167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547214686681600