Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_028663.1 Length=188632 Score E Sequences producing significant alignments: (Bits) Value seq192 518 4e-142 seq2 437 1e-117 seq1 138 1e-27 seq6 86.0 8e-12 >seq192 Length=157790 Score = 518 bits (574), Expect = 4e-142 Identities = 715/994 (72%), Gaps = 12/994 (1%) Strand=Plus/Minus Query 176113 TTTTGCCAGTGGGTCACCAATACAAACAACAGAATTTACGTTGGTTGGTTTGGTGTGCTC 176172 ||||| | ||| | |||| || | ||| | ||||| |||| ||||||||||| | Sbjct 1358 TTTTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1299 Query 176173 ATGATTCCATGTCTGCTCACTGCTGCAGCATGT-TTTATCGTTGCATTTATTGCAGCACC 176231 ||||| || | | | || || | | ||| ||||| |||| || ||||| ||||| Sbjct 1298 ATGATCCCTACTTTATTGACCGCAACTTC-TGTATTTATTATTGCTTTCATTGCTGCACC 1240 Query 176232 ACCTGTCGATATCGACGGTATTCGCGAACCAGTAGCAGGATCTCTACTCTATGGAAACAA 176291 || || ||||| || |||||||| ||||| || | |||||| |||| ||||||||||| Sbjct 1239 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTACTTTATGGAAACAA 1180 Query 176292 CATCATCTCAGGAGCAGTCGTCCCAAGCTCAAACGCAATCGGACTACACTTCTACCCAAT 176351 || || || || || | | || | ||| || || || | ||||| ||||| || Sbjct 1179 TATTATTTCTGGTGCCATTATTCCTACCTCTGCAGCTATAGGTTTGCACTTTTACCCGAT 1120 Query 176352 CTGGGAAGCAGCAACAGTTGACGAATGGCTCTACAATGGAGGACCATACCAACTCGTTGT 176411 |||||||| || | ||||| |||||| | ||||| || || || || |||| |||| Sbjct 1119 ATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAACTAATTGT 1060 Query 176412 ATTCCACTTCCTTATCGGTATCTCAGCTT---ACATGGGACGCCAATGGGAACTTAGTTA 176468 | |||||| | | ||| | ||||| ||||||| || | ||||||||||||| Sbjct 1059 TCTACACTTCTTACTTGGTGT---AGCTTGCTACATGGGTCGTGAGTGGGAACTTAGTTT 1003 Query 176469 CAGACTAGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCAGCGAT 176528 | | || || ||||| |||||||| ||||||||| || || || || | || || | Sbjct 1002 CCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTAC 943 Query 176529 GGCAGTTTTCCTCGTCTATCCATTCGGTCAAGGATCTTTCTCTGATGGTATGCCTCTTGG 176588 || |||||| | | |||||| | ||||||||| || ||||| |||||||| || || Sbjct 942 TGCTGTTTTCTTGATATATCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCCCTAGG 883 Query 176589 CATTTCAGGTACATTCAACTTTATGTTTGTATTCCAAGCAGAGCACAACATTCTAATGCA 176648 || || ||||| |||||||| ||| ||||||||||||| ||||||||||| || ||||| Sbjct 882 AATCTCCGGTACTTTCAACTTCATGATTGTATTCCAAGCCGAGCACAACATCCTTATGCA 823 Query 176649 CCCATTCCATATGCTTGGAGTAGCAGGTGTGTTTGGTGGATCTCTTTTCTCAGCAATGCA 176708 |||||| || ||| | || ||||| ||||| || || || || || ||| || ||||| Sbjct 822 CCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCA 763 Query 176709 CGGAAGTC--TTGTTACTTCTTCACTTGTTAGAGAGACAACCGAAAACGAATCACAAAAC 176766 || ||| | || || ||| | | || || || || ||||| ||||| || Sbjct 762 TGG--GTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAAT 705 Query 176767 TACGGTTACAAATTCGGACAAGAAGAAGAGACATACAACATTGTAGCTGCACACGGTTAC 176826 | ||||||| |||||| ||||| ||||| || || || || ||||| || || ||||| Sbjct 704 GAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATCGTAGCCGCTCATGGTTAT 645 Query 176827 TTTGGTCGTCTTATCTTCCAGTATGCTTCTTTCAATAACTCAAGAAGTCTTCACTTCTTC 176886 ||||| || | |||||||| |||||| |||||| || || | | | || |||||| Sbjct 644 TTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTC 585 Query 176887 CTTGCAGCATTCCCAGTTGTTTGCATCTGGTTTACTGCAATGGGTGTTTGCACAATGGCA 176946 || || || | || || || | ||||||||||| || | ||| | |||| ||||| Sbjct 584 CTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCTTTAGGTATCAGCACTATGGCT 525 Query 176947 TTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTCTTAGACAACTCTGGTAAAGTGATT 177006 |||||| | || ||||| || ||||| || ||||| | || | ||| || ||| Sbjct 524 TTCAACTTAAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTGTAATT 465 Query 177007 CCTACATGGGGAGATATCCTTAACCGTGCAAACCTTGGTATGGAAGTTATGCACGAGCGT 177066 ||| |||| ||||| ||||||| || ||||||||||||||||||||||| || ||| Sbjct 464 AATACTTGGGCTGATATTATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGT 405 Query 177067 AATGCTCACAACTTCCCACTTGACCTTGCTGCTG 177100 ||||| || || ||||| || || || ||||||| Sbjct 404 AATGCCCATAATTTCCCTCTAGATCTAGCTGCTG 371 Score = 141 bits (156), Expect = 1e-28 Identities = 207/288 (72%), Gaps = 6/288 (2%) Strand=Plus/Minus Query 19295 ACCTGTAACAGTACAGTATCCTTACGAGAAACTCAT-ACCGTCAGAGAGATACCGTGGTC 19353 ||||||||| | || |||||||| || ||| | || |||| | ||| | | ||| |||| Sbjct 122375 ACCTGTAACTATTCAATATCCTTATGAAAAATTAATCACCG-CGGAGCGTTTCCGCGGTC 122317 Query 19354 GTATACACTATGAGTTTGACAAGTGTATCGCCTGTGAGGTGTGTGTAAGAGTATGCCCTA 19413 | || || | ||| ||||| || ||||| || ||||| || ||||| | ||||| |||| Sbjct 122316 GAATCCATTTTGAATTTGATAAATGTATTGCTTGTGAAGTATGTGTTCGTGTATGTCCTA 122257 Query 19414 TCAATCTACCAGTGGTGGATTGGGTGATGAACAAACAGACAAAG--AAGAAAGAACTTAG 19471 | ||||||| || || |||||| || | ||| || | |||||| | Sbjct 122256 TAGATCTACCCGTTGTTGATTGGAAATTGGA--AACTGATATTCGCAAGAAACGGTTGCT 122199 Query 19472 AAATTATTCGATAGACTTTGGAGCATGTATTTTCTGCGGTAACTGCGTAGAGTATTGCCC 19531 ||||| || || || |||| ||||| || || ||||| ||||| |||||||| || Sbjct 122198 TAATTACAGTATTGATTTCGGAGTCTGTATATTTTGTGGTAATTGCGTTGAGTATTGTCC 122139 Query 19532 AACAAACTGTCTATCCATGACAGAAGAATATGAATTGGCTACATTTGA 19579 |||||| ||| |||| ||||| |||||||||||| | |||| | ||| Sbjct 122138 AACAAATTGTTTATCAATGACTGAAGAATATGAACTTTCTACTTATGA 122091 >seq2 Length=30405870 Score = 437 bits (484), Expect = 1e-117 Identities = 698/994 (70%), Gaps = 12/994 (1%) Strand=Plus/Plus Query 176113 TTTTGCCAGTGGGTCACCAATACAAACAACAGAATTTACGTTGGTTGGTTTGGTGTGCTC 176172 ||||| | ||| | |||| || | ||| | ||||| |||| ||||||||||| | Sbjct 16144571 TTTTGTAACTGGATAACCAGCACTGAAAACTGTCTTTACATTGGATGGTTTGGTGTTTTG 16144630 Query 176173 ATGATTCCATGTCTGCTCACTGCTGCAGCATGTT-TTATCGTTGCATTTATTGCAGCACC 176231 ||||| || | | | || | | | ||| |||| || | || ||||| ||||| Sbjct 16144631 ATGATCCCTACTTTATTGACCACAACTTC-TGTACTTATTATTACTTTCATTGCTGCACC 16144689 Query 176232 ACCTGTCGATATCGACGGTATTCGCGAACCAGTAGCAGGATCTCTACTCTATGGAAACAA 176291 || || ||||| || |||||||| |||| || | |||||| |||| ||||||||||| Sbjct 16144690 TCCAGTAGATATTGATGGTATTCGTAAACCTGTTTCTGGATCTTTACTTTATGGAAACAA 16144749 Query 176292 CATCATCTCAGGAGCAGTCGTCCCAAGCTCAAACGCAATCGGACTACACTTCTACCCAAT 176351 || || || || || | | || | ||| || || || | ||||| ||||| || Sbjct 16144750 TATTATTTCTGGTGCCATTATTCCTACCTCTGCAGCTATAGGTATGCACTTTTACCCGAT 16144809 Query 176352 CTGGGAAGCAGCAACAGTTGACGAATGGCTCTACAATGGAGGACCATACCAACTCGTTGT 176411 |||||||| || | ||||| |||||| | ||||| || || || || |||| |||| Sbjct 16144810 ATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAACTAATTGT 16144869 Query 176412 ATTCCACTTCCTTATCGGTATCTCAGCTT---ACATGGGACGCCAATGGGAACTTAGTTA 176468 | |||||| | ||| | ||||| ||||||| || | ||||| |||||| Sbjct 16144870 TCTACACTTCTCACTTGGTGT---AGCTTGCTACATGGGTCGTGAGTGGGAGATTAGTTT 16144926 Query 176469 CAGACTAGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCAGCGAT 176528 | | || || | ||| |||||||| ||||||||| || || || || | || || | Sbjct 16144927 CCGTCTGGGTAGGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTAC 16144986 Query 176529 GGCAGTTTTCCTCGTCTATCCATTCGGTCAAGGATCTTTCTCTGATGGTATGCCTCTTGG 176588 || |||||| | | |||||| | ||||||||| || ||||| | ||| | || || Sbjct 16144987 TGCTGTTTTCTTGATATATCCAATTGGTCAAGGAAGCTTTTCTGACGTAATGTCCCTAGG 16145046 Query 176589 CATTTCAGGTACATTCAACTTTATGTTTGTATTCCAAGCAGAGCACAACATTCTAATGCA 176648 || || ||||| |||||||| ||| ||||||||||||| |||||||||| || ||||| Sbjct 16145047 AATCTCCGGTACTTTCAACTTCATGATTGTATTCCAAGCTAAGCACAACATCCTTATGCA 16145106 Query 176649 CCCATTCCATATGCTTGGAGTAGCAGGTGTGTTTGGTGGATCTCTTTTCTCAGCAATGCA 176708 |||||| || ||| | || | ||| ||||| || || || || || ||| || ||||| Sbjct 16145107 CCCATTTCACATGTTAGGCGCAGCCGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCA 16145166 Query 176709 CGGAAGTC-TTGTTACTTCTTCACTTGTT-AGAGAGACAACCGAAAACGAATCACAAAAC 176766 || ||| ||| || | | ||| | || || || | |||| ||||| || Sbjct 16145167 TGG--GTCCTTGGTAACCCCTAGTTTGATCAGGGAAACCATAAAAAATGAATCTGCTAAT 16145224 Query 176767 TACGGTTACAAATTCGGACAAGAAGAAGAGACATACAACATTGTAGCTGCACACGGTTAC 176826 | ||||||| |||||| ||||| ||||| || || || || |||| || || ||||| Sbjct 16145225 GAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATCATAGCCGCTCATGGTTAT 16145284 Query 176827 TTTGGTCGTCTTATCTTCCAGTATGCTTCTTTCAATAACTCAAGAAGTCTTCACTTCTTC 176886 ||||| || | |||||||| |||||| |||||| || || | | | || |||||| Sbjct 16145285 TTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTTGTTCTTTACATTTCTTC 16145344 Query 176887 CTTGCAGCATTCCCAGTTGTTTGCATCTGGTTTACTGCAATGGGTGTTTGCACAATGGCA 176946 || || || | || || || | ||||||||||| | | ||| | | || ||||| Sbjct 16145345 CTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCACTTTAGGTATCAGTACTATGGCT 16145404 Query 176947 TTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTCTTAGACAACTCTGGTAAAGTGATT 177006 |||||| | || ||||| || ||||| || ||||| | || | ||| || ||| Sbjct 16145405 TTCAACTTAAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTGTAATT 16145464 Query 177007 CCTACATGGGGAGATATCCTTAACCGTGCAAACCTTGGTATGGAAGTTATGCACGAGCGT 177066 ||| |||| ||||| ||||||| | ||||||||||||||||||||||| || ||| Sbjct 16145465 AATACTTGGGCTGATATTATTAACCGCGTTAACCTTGGTATGGAAGTTATGCATGAACGT 16145524 Query 177067 AATGCTCACAACTTCCCACTTGACCTTGCTGCTG 177100 |||||||| || ||||| || || || ||||||| Sbjct 16145525 AATGCTCATAATTTCCCTCTAGATCTAGCTGCTG 16145558 >seq1 Length=47851208 Score = 138 bits (152), Expect = 1e-27 Identities = 206/288 (72%), Gaps = 6/288 (2%) Strand=Plus/Minus Query 19295 ACCTGTAACAGTACAGTATCCTTACGAGAAACTCAT-ACCGTCAGAGAGATACCGTGGTC 19353 ||||||||| | || |||||||| || ||| | || |||| | ||| | | ||| |||| Sbjct 1388398 ACCTGTAACTATTCAATATCCTTATGAAAAATTAATCACCG-CTGAGCGTTTCCGCGGTC 1388340 Query 19354 GTATACACTATGAGTTTGACAAGTGTATCGCCTGTGAGGTGTGTGTAAGAGTATGCCCTA 19413 | || || | ||| ||||| || ||||| || ||||| || ||||| | ||||| |||| Sbjct 1388339 GAATGCATTTTGAATTTGATAAATGTATTGCTTGTGAAGTATGTGTTCGTGTATGTCCTA 1388280 Query 19414 TCAATCTACCAGTGGTGGATTGGGTGATGAACAAACAGACAAAG--AAGAAAGAACTTAG 19471 | ||||||| || || |||||| || | ||| || | |||||| | Sbjct 1388279 TAGATCTACCTGTTGTTGATTGGAAATTGGA--AACTGATATTCGCAAGAAACGGTTGCT 1388222 Query 19472 AAATTATTCGATAGACTTTGGAGCATGTATTTTCTGCGGTAACTGCGTAGAGTATTGCCC 19531 ||||| || || || |||| ||||| || || ||||| ||| | |||||||| || Sbjct 1388221 TAATTACAGTATTGATTTCGGAGTCTGTATGTTTTGTGGTAATTGCATTGAGTATTGTCC 1388162 Query 19532 AACAAACTGTCTATCCATGACAGAAGAATATGAATTGGCTACATTTGA 19579 |||||| ||| |||| ||||| |||||||||||| | |||| | ||| Sbjct 1388161 AACAAATTGTTTATCAATGACTGAAGAATATGAACTTTCTACTTATGA 1388114 >seq6 Length=30767194 Score = 86.0 bits (94), Expect = 8e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 176949 CAACCTTAACGGTTTCAACTTCAACCAGTCTGTCTTAGACAACTCTGGTAAAGTGATTCC 177008 ||| || || ||||| || ||||| || ||||| | || | ||| || ||| Sbjct 16007669 CAAACTCAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTGTAATTAA 16007610 Query 177009 TACATGGGGAGATATCCTTAACCGTGCAAACCTTGGTATGGAAGTTATGCACGAGCGTAA 177068 ||| |||| ||||| |||||| || |||||||||||||| |||||||| || ||||| Sbjct 16007609 TACTTGGGCTGATATTATTAACCACGCTAACCTTGGTATGGACGTTATGCATGAACGTAA 16007550 Query 177069 TGCTCACAACTTCCCACTTGACCTTGCTGCTG 177100 |||||| || |||| || || | ||| ||| Sbjct 16007549 TGCTCATAATTTCCATCTAGATGTAGCTTCTG 16007518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603492951613440