Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq8 120 4e-22 seq6 105 9e-18 >seq8 Length=22573980 Score = 120 bits (132), Expect = 4e-22 Identities = 125/164 (76%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 77904 TCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCAT 77963 |||||||| || || | | ||||||| ||||||||||||||| | || ||||| Sbjct 3581199 TCATATTGGGTGTACAACTTCTCAAATTTTTCTCCCCAAACATCAGCTAAGCCAGGAGCC 3581140 Query 77964 TCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCA 78023 |||||||| || | ||| ||||| | ||||| | | |||| || ||| ||||||||| Sbjct 3581139 TCATTTGGACAAAACAAAGACCATTGCCCATCACCTTGGACTCTTTCCATGAAGAGATCA 3581080 Query 78024 GGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTC 78067 || ||||| |||||| |||||||||||| | | ||||||||| Sbjct 3581079 GGAATCCAGAGAGCATAAAATAGATCTCGAGCCCGATGTTCTTC 3581036 Score = 100 bits (110), Expect = 4e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 78398 AGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATT 78457 ||||||| |||| || | ||||||| ||||| | ||||| | || | | || Sbjct 3580290 AGTTCCTCCATTGAAAAGGGTCGGAGTAGCATGAATGAACCAACGCTGGGACATCAAATG 3580231 Query 78458 GTATGTTTCAATAGCTGATTCTATGTCC-CATTGATGAATTCCTACCGCTACACGCATCA 78516 ||| |||| | ||| || || ||||| | ||| || || || || | || | ||||| Sbjct 3580230 GTAGGTTTGGAGAGCAGACTCGATGTCATCCTTG-TGTATACCAACAGAAACCCTCATCA 3580172 Query 78517 ACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCA 78576 |||| ||||| || ||||| || |||| | ||||| || || | ||| || | || | Sbjct 3580171 ACATGTGCTGCGGCCTTTCCACAATCTTCTCATTTACCTTTAAAAGGTAGGACCTCTCTA 3580112 Query 78577 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAAT 78625 ||||||||||||||| |||| || ||||||||| || ||||| || Sbjct 3580111 GAGTTTTAAAACCAAAGTAGTCATAATCAAAGTCTCTTTCATAAATGAT 3580063 Score = 86.0 bits (94), Expect = 9e-12 Identities = 152/222 (68%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 78159 CCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCG 78218 || || ||||| | ||| | || ||| ||||| | |||| | ||| || | |||||| Sbjct 3580638 CCCCCTTGATCAACATAACGAGCAGTGCTATTAAACACTCGAAGCATAGGCACAATACCA 3580579 Query 78219 TTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGAT 78278 || || || || ||||| ||| ||| || || || |||| ||||||||| |||||| Sbjct 3580578 TTCGAAGTACCGTTTGTCCCACGAATGTAGCTACCTGTTGCACGAATATTATGAATGGAG 3580519 Query 78279 ATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATA 78338 || || | ||||| || || || | ||| || ||||||||||| | || Sbjct 3580518 ATACCAAGCCCTCCAGCTGATTTGCTAATAATAGCACATTCCTTCAATGTATCAAAAATT 3580459 Query 78339 CCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTA 78380 || | |||||||| || ||||| | ||| || |||||| Sbjct 3580458 CCTTGAATACTGTCGTCTTTCATGCACATAAGGAAGCAGCTA 3580417 >seq6 Length=30767194 Score = 105 bits (116), Expect = 9e-18 Identities = 126/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 77897 CTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCC 77956 ||||||||||||| | || || ||| |||||||| || ||||| ||| |||| || Sbjct 14680022 CTCTCTTTCATATCGGGTGTAAAGCTCTTCAAATTTTTCACCCCAGCAATCTGCCAAACC 14680081 Query 77957 AGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAA 78016 || | ||||| || || | ||||||||| | ||||| | | ||||| || ||| || Sbjct 14680082 TGGAGACTCATTAGGACAAAACAATGACCAATTGCCATCATTTTGAACTCTTTCCATGAA 14680141 Query 78017 GAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTC 78067 ||||||||| | ||| || ||| ||| ||||| || | || ||| ||||| Sbjct 14680142 GAGATCAGGCACCCAAAGTGCATAAAAAAGATCACGAGCTCGATGCTCTTC 14680192 Score = 104 bits (114), Expect = 3e-17 Identities = 156/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 78159 CCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCG 78218 || || ||||| | ||| | || || | |||| |||||| ||||||||||| ||| || Sbjct 14680464 CCCCCTTGATCAACATAACGAGCTGTATCATTAAAAACTCGCAACATTGGAACAATGCCA 14680523 Query 78219 TTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGAT 78278 || ||||| |||||||||||| |||||| || || | || ||||| || || || Sbjct 14680524 TTGGATGTCCCATTTGTTCCACGAATATAGCTGCCTGTGGCACGAATGTTGTGAACAGAG 14680583 Query 78279 ATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATA 78338 | || |||||||| ||| || || | ||| || ||||| ||||| || || Sbjct 14680584 ACACCAATTCCTCCAGCCGATTTGCTGATAACAGCACATTCCTTCAAAGTATCATAAATG 14680643 Query 78339 CCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTA 78380 || || || || ||||| ||||| || || || |||||| Sbjct 14680644 CCTTCAATGCTATCATCTTTCATGCAAACGAGGAAGCAGCTA 14680685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694667132794880