Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq6 134 2e-26 seq8 120 4e-22 >seq6 Length=30767194 Score = 134 bits (148), Expect = 2e-26 Identities = 163/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 76754 CCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCG 76813 || || ||||| | ||| | || || | |||| |||||| ||||||||||| |||||| Sbjct 14680464 CCCCCTTGATCAACATAACGAGCTGTATCATTAAAAACTCGCAACATTGGAACAATGCCA 14680523 Query 76814 TTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGAT 76873 || ||||| |||||||||||| |||||| || || |||||||| || || ||| Sbjct 14680524 TTGGATGTCCCATTTGTTCCACGAATATAGCTGCCTGTGGCACGAATGTTGTGAACAGAG 14680583 Query 76874 AGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATG 76933 | || |||||||| ||| ||| ||| | |||||| ||||| || ||||| ||| Sbjct 14680584 ACACCAATTCCTCCAGCCGATTTGCTGATAACAGCACATTCCTTCAAAGTATCATAAATG 14680643 Query 76934 CCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTA 76975 || || || |||||||| ||||| || || || |||||| Sbjct 14680644 CCTTCAATGCTATCATCTTTCATGCAAACGAGGAAGCAGCTA 14680685 Score = 105 bits (116), Expect = 1e-17 Identities = 126/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 76492 CTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACC 76551 ||||||||||||| | || || | | |||||||| || ||||| ||| ||||||| Sbjct 14680022 CTCTCTTTCATATCGGGTGTAAAGCTCTTCAAATTTTTCACCCCAGCAATCTGCCAAACC 14680081 Query 76552 AGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAA 76611 ||| | ||||| ||||| | ||||||||| | ||||| | | ||| | || ||| || Sbjct 14680082 TGGAGACTCATTAGGACAAAACAATGACCAATTGCCATCATTTTGAACTCTTTCCATGAA 14680141 Query 76612 GAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTC 76662 ||||||||| | ||| || ||| ||| ||||| || | || | | ||||| Sbjct 14680142 GAGATCAGGCACCCAAAGTGCATAAAAAAGATCACGAGCTCGATGCTCTTC 14680192 >seq8 Length=22573980 Score = 120 bits (132), Expect = 4e-22 Identities = 125/164 (76%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 76499 TCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACAT 76558 |||||||| || || ||| ||||||| ||||||||||||||| | || |||||| Sbjct 3581199 TCATATTGGGTGTACAACTTCTCAAATTTTTCTCCCCAAACATCAGCTAAGCCAGGAGCC 3581140 Query 76559 TCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCA 76618 ||||| ||||| | ||| ||||| | ||||| | | || | || ||| ||||||||| Sbjct 3581139 TCATTTGGACAAAACAAAGACCATTGCCCATCACCTTGGACTCTTTCCATGAAGAGATCA 3581080 Query 76619 GGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTC 76662 || ||||| |||||| |||||||||||| | | | ||||||| Sbjct 3581079 GGAATCCAGAGAGCATAAAATAGATCTCGAGCCCGATGTTCTTC 3581036 Score = 100 bits (110), Expect = 4e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 76993 AGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATT 77052 ||||||| |||| || | || |||| |||||| ||||||| | || | | || Sbjct 3580290 AGTTCCTCCATTGAAAAGGGTCGGAGTAGCATGAATGAACCAACGCTGGGACATCAAATG 3580231 Query 77053 GTATGTTTCAATAACTGCTTCTATATCC-CATTGATGAATTCCTACAGCGACACGCATCA 77111 ||| |||| | | | | || || || | ||| || || || |||| || | ||||| Sbjct 3580230 GTAGGTTTGGAGAGCAGACTCGATGTCATCCTTG-TGTATACCAACAGAAACCCTCATCA 3580172 Query 77112 ACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCA 77171 |||| ||||| || | ||| ||| |||| | ||||| || || | ||| || | || | Sbjct 3580171 ACATGTGCTGCGGCCTTTCCACAATCTTCTCATTTACCTTTAAAAGGTAGGACCTCTCTA 3580112 Query 77172 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 77220 ||||||||||||||| |||| || |||||||||||| ||||| || Sbjct 3580111 GAGTTTTAAAACCAAAGTAGTCATAATCAAAGTCTCTTTCATAAATGAT 3580063 Score = 86.0 bits (94), Expect = 9e-12 Identities = 152/222 (68%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 76754 CCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCG 76813 || || ||||| | ||| | |||||| ||||| | |||| | ||| || | ||| || Sbjct 3580638 CCCCCTTGATCAACATAACGAGCAGTGCTATTAAACACTCGAAGCATAGGCACAATACCA 3580579 Query 76814 TTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGAT 76873 || || ||||| ||||| ||| ||| || || || ||||||||||||| ||| || Sbjct 3580578 TTCGAAGTACCGTTTGTCCCACGAATGTAGCTACCTGTTGCACGAATATTATGAATGGAG 3580519 Query 76874 AGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATG 76933 | || | ||||| || ||| || | |||||| |||||||| ||| | || Sbjct 3580518 ATACCAAGCCCTCCAGCTGATTTGCTAATAATAGCACATTCCTTCAATGTATCAAAAATT 3580459 Query 76934 CCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTA 76975 || | ||||| || || ||||| | ||| || |||||| Sbjct 3580458 CCTTGAATACTGTCGTCTTTCATGCACATAAGGAAGCAGCTA 3580417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712932688957440