Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_031235.1 Length=194437 Score E Sequences producing significant alignments: (Bits) Value seq192 654 0.0 seq2 571 7e-158 seq6 100 4e-16 >seq192 Length=157790 Score = 654 bits (724), Expect = 0.0 Identities = 739/985 (75%), Gaps = 4/985 (0%) Strand=Plus/Minus Query 183205 TGGATTACCAGCACTAACAACCGCCTCTATGTGGGTTGGTTTGGCACACTGATGATTCCA 183264 ||||| ||||||||| | ||||| || || | || |||||||| ||||||| || Sbjct 1349 TGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCT 1290 Query 183265 ACTCTGTTGGCAGCAACCATCTGC-TTCATCGTTGCCTTCGTCGCTGCTCCTCCTGTGGA 183323 ||| | ||| | ||||| |||| || || |||| ||| | ||||| ||||| || || Sbjct 1289 ACTTTATTGACCGCAACT-TCTGTATTTATTATTGCTTTCATTGCTGCACCTCCAGTAGA 1231 Query 183324 CATCGACGGCATCCGCGAACCCGTTGCTGGGTCGCTCATGTATGGAAACAACATCATCTC 183383 || || || || || ||||| ||| |||| || | | ||||||||||| || || || Sbjct 1230 TATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTACTTTATGGAAACAATATTATTTC 1171 Query 183384 TGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGACTTCACTTCTATCCCATCTGGGAAGC 183443 |||||| || ||||| | || || || || | ||||| || || || |||||||| Sbjct 1170 TGGTGCCATTATTCCTACCTCTGCAGCTATAGGTTTGCACTTTTACCCGATATGGGAAGC 1111 Query 183444 AGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTTACCAACTCGTAGTCTTCCACTT 183503 || || | ||||| ||| | || |||||||||||||| |||| | || | ||||| Sbjct 1110 GGCTTCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTT 1051 Query 183504 CCTCATTGGCGTCTTCTGCTACATGGGTCGTGAGTGGGAATTGTCTTACCGTCTCGGTAT 183563 | | |||| || |||||||||||||||||||||||| | || |||||| ||||| Sbjct 1050 CTTACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTAT 991 Query 183564 GCGTCCTTGGATCTGTGTTGCTTATAGCGCACCTGTTGCTGCTGCAACCGCTGTCTTCCT 183623 ||| |||||||| |||||| ||| || |||||||| ||||| || ||||| ||| | Sbjct 990 GCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTT 931 Query 183624 GGTCTATCCTTTCGGTCAAGGTTCTTTTAGTGATGGTATGCCCCTGGGTATCAGTGGCAC 183683 | | ||||| | |||||||| ||| ||| ||||||||||| || ||| || || Sbjct 930 GATATATCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCCCTAGGAATCTCCGGTAC 871 Query 183684 CTTTAACTATATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCACAT 183743 || |||| ||| |||| |||||||| |||||||||||||| |||||||| || ||||| Sbjct 870 TTTCAACTTCATGATTGTATTCCAAGCCGAGCACAACATCCTTATGCACCCATTTCACAT 811 Query 183744 GCTGGGTGTCGCTGGTGTCTTCGGTGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGGT 183803 | | || || |||||||| ||||| || || || |||||||| ||||| || || |||| Sbjct 810 GTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGGTCCTTGGT 751 Query 183804 TACTTCCTCGCTGGTTC-GTGAAACCACTGAGTCTGAGTCACAGAACTATGGTTACAAGT 183862 || || | | | | || | |||||||| || ||| || || | ||||||| | Sbjct 750 AACCTC-TAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGAT 692 Query 183863 TCGGTCAAGAAGAAGAGACCTACAACATTGTCGCTGCTCATGGATACTTTGGTCGTCTGA 183922 |||||||||| ||||| ||||| || || || || |||||||| || ||||| || ||| Sbjct 691 TCGGTCAAGAGGAAGAAACCTATAATATCGTAGCCGCTCATGGTTATTTTGGCCGATTGA 632 Query 183923 TCTTCCAGTATGCTTCGTTTAACAATTCTCGTTCTCTTCACTTCTTCCTTGCTGCTTGGC 183982 ||||||| |||||| || ||||||||||||||| | || |||||||| |||||||||| Sbjct 631 TCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGC 572 Query 183983 CAGTGGTCGGCATCTGGTTTACTGCTCTTGGTGTTAGCACTATGGCATTTAACCTGAATG 184042 | || || || ||||||||||| ||| | ||| | ||||||||||| || ||| | |||| Sbjct 571 CTGTAGTAGGTATCTGGTTTACCGCTTTAGGTATCAGCACTATGGCTTTCAACTTAAATG 512 Query 184043 GTTTTAACTTCAACCAGTCCATCATTGATGGTCAAGGTCGTGTCCTGAACACCTGGGCAG 184102 ||||||| ||||| || || | ||||| |||| |||||||| | || || ||||| | Sbjct 511 GTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTGTAATTAATACTTGGGCTG 452 Query 184103 ACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGTAATGCTCACAACT 184162 | || | ||||| ||| ||||| |||||||| ||||| || |||||||| || || | Sbjct 451 ATATTATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCCCATAATT 392 Query 184163 TCCCTCTCGACCTTGCTGCTGCTGA 184187 ||||||| || || ||||||| ||| Sbjct 391 TCCCTCTAGATCTAGCTGCTGTTGA 367 Score = 491 bits (544), Expect = 6e-134 Identities = 713/1004 (71%), Gaps = 2/1004 (0%) Strand=Plus/Plus Query 185971 TGGATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCTGGTCTGGATTACTTCTTT 186030 ||||||||||| | | |||||||| || ||||| || |||||||| || | || | Sbjct 34243 TGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGCCTATTGCTCT 34302 Query 186031 TTCCCACTGCTTATATGGCAATTGGTGGCTGGCTTACTGGCACAACGTTTGTTACGAGCT 186090 |||| ||| ||| | || | || || ||| | || || ||||| ||||| || | Sbjct 34303 TTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCAT 34362 Query 186091 GGTATACCCACGGGTTGGCGTCTTCTTACCTTGAGGGTGCTAATTTTCTCACGGCAGCAG 186150 |||||||||| || || || ||| || | || || ||| || | || || |||| Sbjct 34363 GGTATACCCATGGATTAGCAAGTTCCTATTTGGAAGGCTGTAACTTCTTAACCGCCGCAG 34422 Query 186151 TGTCAACTCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTC 186210 | || ||||| ||| | | | | || ||| | | |||| ||||||||||| | | Sbjct 34423 TTTCCACTCCGGCTAATAGTTTAGCGCACTCTTTGTTGTTACTATGGGGTCCTGAAGCAC 34482 Query 186211 AAGGAGATATCATCCGCTGGTTCCAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCACG 186270 |||||||| | | || |||| ||| | || || || |||| |||||| || || |||| Sbjct 34483 AAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTTTTGTTGCTCTACACG 34542 Query 186271 GAGCCTTTGCTCTCATAGGTTTCATGCTGCGACAGTTTGAAATCAGTCG-TCTCGTAGGT 186329 | || || | || |||||||| ||| | || || |||||| | ||| ||| | | Sbjct 34543 GCGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT 34602 Query 186330 ATCCGTCCATACAATGCCATTGCTTTTTCTGGTCCTATCGCTGTCTTTGTTAGTGTATTC 186389 | || || || ||||| || || || || ||||| || ||||| |||||| ||||||| Sbjct 34603 -TGCGACCTTATAATGCAATCGCATTCTCCGGTCCAATTGCTGTTTTTGTTTCTGTATTC 34661 Query 186390 CTCATCTACCCTCTTGGACAGTCCTCATGGTTCTTCGCTCCCTCCTTTGGAGTCGCAGCA 186449 || || || || || || ||||| ||||| || || ||| ||||| || ||||| Sbjct 34662 CTAATTTATCCGCTAGGTCAGTCTGGTTGGTTTTTTGCGCCCAGTTTTGGTGTAGCAGCT 34721 Query 186450 ATCTTTAGATTCCTGTTGTTCCTCCAAGGATTCCACAACTGGACGTTGAATCCATTCCAC 186509 || ||| ||||| | | || ||||||| || || || ||||| ||||| ||||| || Sbjct 34722 ATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCAT 34781 Query 186510 ATGATGGGTGTAGCAGGTATCCTTGGTGGTGCTCTGCTGTCAGCAATCCATGGTGTTACT 186569 |||||||| || || || | | || | ||||||| | | || || ||||||| ||| Sbjct 34782 ATGATGGGAGTTGCTGGGGTGTTGGGCGCTGCTCTGTTATGCGCTATTCATGGTGCTACC 34841 Query 186570 GTAGAAAATACTCTTTATGAAGATGGCGAACAAGCAAACACATTCAAAGCATTCGATACG 186629 |||||||||||| | | ||||||||| || ||||| |||||| || || | | Sbjct 34842 GTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCA 34901 Query 186630 ACGCAAGAAGAAGAAACCTATTCGATGGTCACTGCGAACAGATTCTGGTCACAGATCTTC 186689 || |||| |||||||| ||||| |||||||| || ||| | || ||||| || ||||| Sbjct 34902 ACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTT 34961 Query 186690 GGAATTGCGTTTAGCAATAAGCGTTGGCTTCATTTCTTCATGCTCTTTGTTCCTGTTATG 186749 || |||| ||| |||||| |||||| | |||||||| ||| | ||||| || || | Sbjct 34962 GGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACC 35021 Query 186750 GGTCTTTGGACCTCTTCCATTGGCATTATTGGTCTTGCTCTTAACCTTCGTGCTTATGAC 186809 ||| | |||| | | |||| | | ||||| || |||||||| ||||| |||||| Sbjct 35022 GGTTTGTGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCCCTTAACCTACGTGCCTATGAC 35081 Query 186810 TTTGTAAGTCAGGAGGTGAGAGCAGCAGAGGATCCTGAGTTCGAGACGTTCTATACCAAG 186869 || || |||||| | | ||||| || |||||||| || ||||| ||||| ||||| Sbjct 35082 TTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAA 35141 Query 186870 AATATCCTATTGAATGAAGGTCTACGTGCCTGGATGGCACCAGTGGATCAACCACATGAA 186929 ||||| || || || |||||| | ||||| |||||||| | ||||| || |||||| Sbjct 35142 AATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAA 35201 Query 186930 AACTTTGTATTTCCTGAAGAAGTGTTGCCAAGAGGCAACGCTCT 186973 ||| || |||| ||||| || || | || | || |||||||| Sbjct 35202 AACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 35245 >seq2 Length=30405870 Score = 571 bits (632), Expect = 7e-158 Identities = 735/1005 (73%), Gaps = 8/1005 (1%) Strand=Plus/Plus Query 183187 TGGGAATCCTTCTGCGAATGGATTACCAGCACTAACAACCGCCTCTATGTGGGTTGGTTT 183246 |||| | ||| || | ||||| ||||||||| | ||| | || || | || |||||| Sbjct 16144562 TGGGGTTGCTTTTGTAACTGGATAACCAGCACTGAAAACTGTCTTTACATTGGATGGTTT 16144621 Query 183247 GGCACACTGATGATTCCAACTCTGTTGGCAGCAACCATCTG--CTTCATCGTTGCCTTCG 183304 || ||||||| || ||| | ||| | |||| |||| ||| || || | ||| Sbjct 16144622 GGTGTTTTGATGATCCCTACTTTATTGACCACAACT-TCTGTACTT-ATTATTACTTTCA 16144679 Query 183305 TCGCTGCTCCTCCTGTGGACATCGACGGCATCCGCGAACCCGTTGCTGGGTCGCTCATGT 183364 | ||||| ||||| || || || || || || || |||| ||| |||| || | | | Sbjct 16144680 TTGCTGCACCTCCAGTAGATATTGATGGTATTCGTAAACCTGTTTCTGGATCTTTACTTT 16144739 Query 183365 ATGGAAACAACATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGACTTCACT 183424 |||||||||| || || |||||||| || ||||| | || || || || | |||| Sbjct 16144740 ATGGAAACAATATTATTTCTGGTGCCATTATTCCTACCTCTGCAGCTATAGGTATGCACT 16144799 Query 183425 TCTATCCCATCTGGGAAGCAGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTTACC 183484 | || || || |||||||| || || | ||||| ||| | || |||||||||||||| Sbjct 16144800 TTTACCCGATATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAACGGTGGTCCTTATG 16144859 Query 183485 AACTCGTAGTCTTCCACTTCCTCA-TTGGCGTCTTCTGCTACATGGGTCGTGAGTGGGAA 183543 |||| | || | ||||| |||| |||| || ||||||||||||||||||||||| Sbjct 16144860 AACTAATTGTTCTACACTT-CTCACTTGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAG 16144918 Query 183544 TTGTCTTACCGTCTCGGTATGCGTCCTTGGATCTGTGTTGCTTATAGCGCACCTGTTGCT 183603 | || |||||| |||| ||| |||||||| |||||| ||| || |||||||| Sbjct 16144919 ATTAGTTTCCGTCTGGGTAGGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCA 16144978 Query 183604 GCTGCAACCGCTGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTTAGTGATGGTATG 183663 ||||| || ||||| ||| || | ||||| | |||||||| ||| ||| | ||| Sbjct 16144979 GCTGCTACTGCTGTTTTCTTGATATATCCAATTGGTCAAGGAAGCTTTTCTGACGTAATG 16145038 Query 183664 CCCCTGGGTATCAGTGGCACCTTTAACTATATGCTTGTCTTCCAAGCAGAGCACAACATC 183723 |||| || ||| || || || |||| ||| |||| |||||||| ||||||||||| Sbjct 16145039 TCCCTAGGAATCTCCGGTACTTTCAACTTCATGATTGTATTCCAAGCTAAGCACAACATC 16145098 Query 183724 CTGATGCACCCCTTCCACATGCTGGGTGTCGCTGGTGTCTTCGGTGGTTCTCTGTTCAGT 183783 || |||||||| || |||||| | || | || ||||| ||||| || || || |||||| Sbjct 16145099 CTTATGCACCCATTTCACATGTTAGGCGCAGCCGGTGTATTCGGCGGCTCCCTATTCAGT 16145158 Query 183784 GCAATGCACGGTTCTCTGGTTACTTCCTCGCTGGTTC-GTGAAACCACTGAGTCTGAGTC 183842 || ||||| || || |||| || ||| | | | || | ||||||| | ||| || Sbjct 16145159 GCTATGCATGGGTCCTTGGTAAC-CCCTAGTTTGATCAGGGAAACCATAAAAAATGAATC 16145217 Query 183843 ACAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATTGTCGCTGCTCA 183902 || | ||||||| ||||||||||| ||||| ||||| || || | || ||||| Sbjct 16145218 TGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATCATAGCCGCTCA 16145277 Query 183903 TGGATACTTTGGTCGTCTGATCTTCCAGTATGCTTCGTTTAACAATTCTCGTTCTCTTCA 183962 ||| || ||||| || |||||||||| |||||| || ||||||||| ||||| | || Sbjct 16145278 TGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTTGTTCTTTACA 16145337 Query 183963 CTTCTTCCTTGCTGCTTGGCCAGTGGTCGGCATCTGGTTTACTGCTCTTGGTGTTAGCAC 184022 |||||||| ||||||||||| || || || ||||||||||| || | ||| | || || Sbjct 16145338 TTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCACTTTAGGTATCAGTAC 16145397 Query 184023 TATGGCATTTAACCTGAATGGTTTTAACTTCAACCAGTCCATCATTGATGGTCAAGGTCG 184082 |||||| || ||| | ||||||||||| ||||| || || | ||||| |||| ||||| Sbjct 16145398 TATGGCTTTCAACTTAAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCG 16145457 Query 184083 TGTCCTGAACACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCA 184142 ||| | || || ||||| || || | ||||| | | ||||| |||||||| ||||| Sbjct 16145458 TGTAATTAATACTTGGGCTGATATTATTAACCGCGTTAACCTTGGTATGGAAGTTATGCA 16145517 Query 184143 CGAGCGTAATGCTCACAACTTCCCTCTCGACCTTGCTGCTGCTGA 184187 || ||||||||||| || |||||||| || || ||||||| ||| Sbjct 16145518 TGAACGTAATGCTCATAATTTCCCTCTAGATCTAGCTGCTGTTGA 16145562 >seq6 Length=30767194 Score = 100 bits (110), Expect = 4e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 184033 AACCTGAATGGTTTTAACTTCAACCAGTCCATCATTGATGGTCAAGGTCGTGTCCTGAAC 184092 || || ||||||||||| ||||| || || | ||||| |||| |||||||| | || Sbjct 16007668 AAACTCAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTGTAATTAAT 16007609 Query 184093 ACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGTAAT 184152 || ||||| || || | |||| ||| ||||| ||||| || ||||| || |||||| Sbjct 16007608 ACTTGGGCTGATATTATTAACCACGCTAACCTTGGTATGGACGTTATGCATGAACGTAAT 16007549 Query 184153 GCTCACAACTTCCCTCTCGACCTTGCTGCTGCTGA 184187 ||||| || |||| ||| || | ||| ||| ||| Sbjct 16007548 GCTCATAATTTCCATCTAGATGTAGCTTCTGTTGA 16007514 Score = 89.7 bits (98), Expect = 6e-13 Identities = 70/84 (83%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 183853 GGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATTGTCGCTGCTCATGGATACTTT 183912 ||||||| ||||||||||| ||||| ||||| || ||||| || |||||||| || ||| Sbjct 12498437 GGTTACATATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGCCGCTCATGGTTATTTT 12498378 Query 183913 GGTCGTCTGATCTTCCAGTATGCT 183936 || || |||||||||| |||||| Sbjct 12498377 GGCCGATTGATCTTCCAATATGCT 12498354 Score = 84.2 bits (92), Expect = 3e-11 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 183853 GGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATTGTCGCTGCTCATGGATACTTT 183912 ||||||| ||||||||||| ||||| ||||| | ||||| || |||||||| || ||| Sbjct 12498661 GGTTACATATTCGGTCAAGAGGAAGAAACCTATTATATTGTAGCCGCTCATGGTTATTTT 12498602 Query 183913 GGTCGTCTGATCTTCCAGTATGCT 183936 || || |||||||||| |||||| Sbjct 12498601 GGCCGATTGATCTTCCAATATGCT 12498578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622068907031040