Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_031242.1 Length=174307 Score E Sequences producing significant alignments: (Bits) Value seq192 627 1e-174 seq2 551 6e-152 seq6 93.3 5e-14 seq1 91.5 2e-13 >seq192 Length=157790 Score = 627 bits (694), Expect = 1e-174 Identities = 742/996 (74%), Gaps = 8/996 (1%) Strand=Plus/Minus Query 163928 TTCTGTAACTGGGTAACTTCAACCGACAATCGTTTGTATGTCGGTTGGTTCGGCGTCCTG 163987 || ||||||||| |||| || || || ||| | || | || ||||| || || || Sbjct 1358 TTTTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1299 Query 163988 ATGATTCCCTGCCTGCTGG-CAGCGACTACATGT-TTCATCATCGCCTTCATCGGTGCTC 164045 ||||| |||| | | | | | || ||| | ||| || || || || ||||| | ||| | Sbjct 1298 ATGAT-CCCTACTTTATTGACCGCAACTTC-TGTATTTATTATTGCTTTCATTGCTGCAC 1241 Query 164046 CTCCTGTGGACATCGATGGCATCCGCGAACCCGTCGCTGGTTCGCTCATGTATGGAAACA 164105 |||| || || || ||||| || || ||||| || |||| || | | |||||||||| Sbjct 1240 CTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTACTTTATGGAAACA 1181 Query 164106 ACATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCCA 164165 | || || |||||||| |||| ||| | ||| ||||| ||| ||||||| ||||| | Sbjct 1180 ATATTATTTCTGGTGCCATTATTCCTACCTCTGCAGCTATAGGTTTGCACTTTTACCCGA 1121 Query 164166 TCTGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTG 164225 | |||||||| || | || |||||| | |||||||||||||||| |||| ||| Sbjct 1120 TATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAACTAATTG 1061 Query 164226 TGTTCCACTTCCTGATTGGCAT--CTATGCTTACATGGGTCGTGAGTGGGAACTTTCTTA 164283 | | |||||| | |||| | || |||| ||||||||||||||||||||||| || Sbjct 1060 TTCTACACTTCTTACTTGGTGTAGCT-TGCT-ACATGGGTCGTGAGTGGGAACTTAGTTT 1003 Query 164284 CCGTCTTGGTATGCGTCCTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGCAGCGAG 164343 |||||| |||||||| ||||||||| || ||||| || |||||||| || || || | Sbjct 1002 CCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTAC 943 Query 164344 TGCAGTGTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGGG 164403 ||| || ||| || | ||||| | |||||||| || ||||| | ||||| || || Sbjct 942 TGCTGTTTTCTTGATATATCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCCCTAGG 883 Query 164404 CATCTCTGGAACCTTCAACTACATGTTGGTCTTCCAGGCTGAGCACAACATCCTCATGCA 164463 ||||| || || ||||||| |||| | || ||||| || |||||||||||||| ||||| Sbjct 882 AATCTCCGGTACTTTCAACTTCATGATTGTATTCCAAGCCGAGCACAACATCCTTATGCA 823 Query 164464 CCCCTTCCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCA 164523 ||| || || ||| | |||||||| ||||| || ||||| || || |||||||| ||||| Sbjct 822 CCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCA 763 Query 164524 CGGTTCGCTGGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAAATGAGTCCCAGAACTA 164583 || || |||| || ||| || | | || ||||| |||||||| || || | Sbjct 762 TGGGTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGA 703 Query 164584 TGGTTACAAGTTTGGTCAGGAAGAAGAAACCTACAACATCGTTGCCGCTCACGGTTACTT 164643 ||||||| || ||||| || ||||||||||| || ||||| |||||||| ||||| || Sbjct 702 AGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATCGTAGCCGCTCATGGTTATTT 643 Query 164644 TGGTCGTCTGATTTTCCAATACGCTTCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCT 164703 ||| || |||| |||||||| ||| |||||||| || ||||| | || |||||||| Sbjct 642 TGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCT 583 Query 164704 CGCAGCATGGCCTGTTGTCGGTATCTGGTTTACTGCTCTGGGCGTTAGCACCATGGCATT 164763 || || |||||||| || |||||||||||||| ||| | || | ||||| ||||| || Sbjct 582 AGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCTTTAGGTATCAGCACTATGGCTTT 523 Query 164764 CAACCTCAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAA 164823 |||| | || ||||| || ||||| || || | | ||| ||||||||||||| | || Sbjct 522 CAACTTAAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTGTAATTAA 463 Query 164824 CACCTGGGCAGACGTTCTCAACCGTGCTGGTCTGGGCATGGAAGTGATGCACGAGCGTAA 164883 || ||||| || || | ||||| ||| || || |||||||| ||||| || ||||| Sbjct 462 TACTTGGGCTGATATTATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAA 403 Query 164884 TGCTCACAACTTCCCTCTCGACCTTGCTGCTGCTGA 164919 ||| || || |||||||| || || ||||||| ||| Sbjct 402 TGCCCATAATTTCCCTCTAGATCTAGCTGCTGTTGA 367 Score = 545 bits (604), Expect = 3e-150 Identities = 717/991 (72%), Gaps = 2/991 (0%) Strand=Plus/Plus Query 165180 AGAGACCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTTTTCCCACTGCTTATCTT 165239 || ||||| ||||||||||| || |||||||| || | || ||||| ||| ||| | Sbjct 34260 AGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGCCTATTGCTCTTTCCTTGTGCCTATTTC 34319 Query 165240 GCTCTTGGGGGTTGGCTTACTGGGACTACTTTCGTCACGAGTTGGTATACTCACGGACTT 165299 ||| | ||||||||| | || || || || || || || |||||||| || ||| | Sbjct 34320 GCTTTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACTTCATGGTATACCCATGGATTA 34379 Query 165300 GCGAGTTCCTATCTTGAGGGTGCAAACTTTCTTACTGCGGCAGTTTCTACTCCAGCAGAC 165359 || ||||||||| | || || ||||| | || || |||||||| ||||| || | Sbjct 34380 GCAAGTTCCTATTTGGAAGGCTGTAACTTCTTAACCGCCGCAGTTTCCACTCCGGCTAAT 34439 Query 165360 GCTATGGGTCATTCTCTTCTGCTTCTATGGGGTCCTGAGTCTCAAGGGGACTTCATCCGC 165419 | | | || ||| | || | |||||||||||||| | ||||| || || | || Sbjct 34440 AGTTTAGCGCACTCTTTGTTGTTACTATGGGGTCCTGAAGCACAAGGAGATTTTACTCGT 34499 Query 165420 TGGTGCCAACTTGGGGGACTCTGGACTTTTGTGGCGCTCCACGGAGCCTTTGCACTTATA 165479 ||||| ||| | || || || ||||||||||| || || ||||| || || | ||| ||| Sbjct 34500 TGGTGTCAATTAGGCGGTCTGTGGACTTTTGTTGCTCTACACGGCGCTTTCGGACTAATA 34559 Query 165480 GGTTTCATGCTTCGCCAGTTTGAACTGGCACGA-CTTATCGGTATTCGTCCTTACAATGC 165538 ||||| ||| | || || |||||||| || ||| || || | | || ||||| ||||| Sbjct 34560 GGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-TGCGACCTTATAATGC 34618 Query 165539 TATTGCTTTCTCTGGTCCTATTGCTGTATTCGTTAGTGTTTTTCTTATGTATCCTCTGGG 165598 || || ||||| ||||| |||||||| || ||| ||| || || || ||||| || || Sbjct 34619 AATCGCATTCTCCGGTCCAATTGCTGTTTTTGTTTCTGTATTCCTAATTTATCCGCTAGG 34678 Query 165599 ACAATCGTCCTGGTTCTTCGCACCGTCGTTCGGGGTCGCAGCAATCTTCCGATTCCTGCT 165658 || || ||||| || || || || || || ||||| || || |||||| | || Sbjct 34679 TCAGTCTGGTTGGTTTTTTGCGCCCAGTTTTGGTGTAGCAGCTATATTTCGATTCATCCT 34738 Query 165659 CTTCCTCCAAGGGTTCCATAACTGGACGCTGAATCCCTTTCACATGATGGGCGTAGCAGG 165718 ||| |||||||||| ||||| ||||| |||| || ||||| |||||||| || || || Sbjct 34739 CTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTTGCTGG 34798 Query 165719 TATCTTAGGCGGAGCATTGCTTTCTGCCATTCATGGTGTTACAGTAGAGAATACTTTGTA 165778 | || |||| || || | | || |||||||||| ||| ||||| |||||||| | Sbjct 34799 GGTGTTGGGCGCTGCTCTGTTATGCGCTATTCATGGTGCTACCGTAGAAAATACTTTATT 34858 Query 165779 TGAAGATGGTGAACAAGCAAACACTTTCAAAGCATTTGATAGTACTCAGGAAGAGGAAAC 165838 |||||||||||| ||||| || ||| || ||| | ||||| | || ||||| Sbjct 34859 TGAAGATGGTGATGGTGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAAC 34918 Query 165839 TTATTCCATGGTCACTGCTAACCGTTTCTGGTCTCAGATTTTTGGTATTGCTTTCAGCAA 165898 |||||| |||||||| |||||||| || ||||| || || ||||| ||||||| ||| Sbjct 34919 TTATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAA 34978 Query 165899 TAAGCGTTGGCTTCACTTCTTTATGCTCTTTGTTCCTGTCATGGGACTTTGGACAAGTTC 165958 ||| |||||| | || ||||||||| | ||||| || || | || | |||| ||| | Sbjct 34979 TAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTGTGGATGAGTGC 35038 Query 165959 TATTGGTATCATTGGTCTCGCACTCAATCTTCGTGCTTATGATTTTGTGTCTCAGGAGAT 166018 | |||| | | ||||| || || || || ||||| ||||| || || |||||||| || Sbjct 35039 TCTTGGAGTAGTCGGTCTGGCCCTTAACCTACGTGCCTATGACTTCGTTTCTCAGGAAAT 35098 Query 166019 TAGAGCTGCTGAGGATCCAGAGTTTGAAACGTTCTATACGAAAAACATCCTCCTTAATGA 166078 | || || || ||||| || ||||| || ||||| || ||||| || ||| | || || Sbjct 35099 CCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAACGA 35158 Query 166079 AGGACTCCGTGCCTGGTTGGCTCCTGTAGACCAACCTCATGAGAACTTTGTGTTCCCTGA 166138 ||| | ||||| ||| |||| || ||| || |||||||| ||| || | |||||||| Sbjct 35159 AGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGA 35218 Query 166139 AGAAGTCTTGCCAAGAGGCAACGCACTTTAA 166169 || || | || | || ||||| |||||| Sbjct 35219 GGAGGTTCTACCCCGTGGAAACGCTCTTTAA 35249 >seq2 Length=30405870 Score = 551 bits (610), Expect = 6e-152 Identities = 725/996 (73%), Gaps = 8/996 (1%) Strand=Plus/Plus Query 163928 TTCTGTAACTGGGTAACTTCAACCGACAATCGTTTGTATGTCGGTTGGTTCGGCGTCCTG 163987 || ||||||||| |||| || || || || | || | || ||||| || || || Sbjct 16144571 TTTTGTAACTGGATAACCAGCACTGAAAACTGTCTTTACATTGGATGGTTTGGTGTTTTG 16144630 Query 163988 ATGATTCCCTGCCTGCTGG-CAGCGACTACATGTT-TCATCATCGCCTTCATCGGTGCTC 164045 ||||| |||| | | | | | | ||| | ||| | || || | ||||| | ||| | Sbjct 16144631 ATGAT-CCCTACTTTATTGACCACAACTTC-TGTACTTATTATTACTTTCATTGCTGCAC 16144688 Query 164046 CTCCTGTGGACATCGATGGCATCCGCGAACCCGTCGCTGGTTCGCTCATGTATGGAAACA 164105 |||| || || || ||||| || || |||| || |||| || | | |||||||||| Sbjct 16144689 CTCCAGTAGATATTGATGGTATTCGTAAACCTGTTTCTGGATCTTTACTTTATGGAAACA 16144748 Query 164106 ACATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCCA 164165 | || || |||||||| |||| ||| | ||| ||||| ||| ||||||| ||||| | Sbjct 16144749 ATATTATTTCTGGTGCCATTATTCCTACCTCTGCAGCTATAGGTATGCACTTTTACCCGA 16144808 Query 164166 TCTGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTG 164225 | |||||||| || | || |||||| | |||||||||||||||| |||| ||| Sbjct 16144809 TATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAACTAATTG 16144868 Query 164226 TGTTCCACTTCCTGATTGGCAT--CTATGCTTACATGGGTCGTGAGTGGGAACTTTCTTA 164283 | | |||||| |||| | || |||| ||||||||||||||||||| || || Sbjct 16144869 TTCTACACTTCTCACTTGGTGTAGCT-TGCT-ACATGGGTCGTGAGTGGGAGATTAGTTT 16144926 Query 164284 CCGTCTTGGTATGCGTCCTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGCAGCGAG 164343 |||||| |||| ||| ||||||||| || ||||| || |||||||| || || || | Sbjct 16144927 CCGTCTGGGTAGGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTAC 16144986 Query 164344 TGCAGTGTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGGG 164403 ||| || ||| || | ||||| | |||||||| || ||||| | |||| | || || Sbjct 16144987 TGCTGTTTTCTTGATATATCCAATTGGTCAAGGAAGCTTTTCTGACGTAATGTCCCTAGG 16145046 Query 164404 CATCTCTGGAACCTTCAACTACATGTTGGTCTTCCAGGCTGAGCACAACATCCTCATGCA 164463 ||||| || || ||||||| |||| | || ||||| ||| ||||||||||||| ||||| Sbjct 16145047 AATCTCCGGTACTTTCAACTTCATGATTGTATTCCAAGCTAAGCACAACATCCTTATGCA 16145106 Query 164464 CCCCTTCCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCA 164523 ||| || || ||| | |||| ||| ||||| || ||||| || || |||||||| ||||| Sbjct 16145107 CCCATTTCACATGTTAGGCGCAGCCGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCA 16145166 Query 164524 CGGTTCGCTGGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAAATGAGTCCCAGAACTA 164583 || || |||| || || || | | || |||| ||||||| || || | Sbjct 16145167 TGGGTCCTTGGTAACCCCTAGTTTGATCAGGGAAACCATAAAAAATGAATCTGCTAATGA 16145226 Query 164584 TGGTTACAAGTTTGGTCAGGAAGAAGAAACCTACAACATCGTTGCCGCTCACGGTTACTT 164643 ||||||| || ||||| || ||||||||||| || ||| | |||||||| ||||| || Sbjct 16145227 AGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATCATAGCCGCTCATGGTTATTT 16145286 Query 164644 TGGTCGTCTGATTTTCCAATACGCTTCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCT 164703 ||| || |||| |||||||| ||| |||||||| || |||| | || |||||||| Sbjct 16145287 TGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTTGTTCTTTACATTTCTTCCT 16145346 Query 164704 CGCAGCATGGCCTGTTGTCGGTATCTGGTTTACTGCTCTGGGCGTTAGCACCATGGCATT 164763 || || |||||||| || |||||||||||||| || | || | || || ||||| || Sbjct 16145347 AGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCACTTTAGGTATCAGTACTATGGCTTT 16145406 Query 164764 CAACCTCAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAA 164823 |||| | || ||||| || ||||| || || | | ||| ||||||||||||| | || Sbjct 16145407 CAACTTAAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTGTAATTAA 16145466 Query 164824 CACCTGGGCAGACGTTCTCAACCGTGCTGGTCTGGGCATGGAAGTGATGCACGAGCGTAA 164883 || ||||| || || | ||||| | | || || |||||||| ||||| || ||||| Sbjct 16145467 TACTTGGGCTGATATTATTAACCGCGTTAACCTTGGTATGGAAGTTATGCATGAACGTAA 16145526 Query 164884 TGCTCACAACTTCCCTCTCGACCTTGCTGCTGCTGA 164919 |||||| || |||||||| || || ||||||| ||| Sbjct 16145527 TGCTCATAATTTCCCTCTAGATCTAGCTGCTGTTGA 16145562 >seq6 Length=30767194 Score = 93.3 bits (102), Expect = 5e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 164764 CAACCTCAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAA 164823 ||| ||||| ||||| || ||||| || || | | ||| ||||||||||||| | || Sbjct 16007669 CAAACTCAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTGTAATTAA 16007610 Query 164824 CACCTGGGCAGACGTTCTCAACCGTGCTGGTCTGGGCATGGAAGTGATGCACGAGCGTAA 164883 || ||||| || || | |||| ||| || || ||||| || ||||| || ||||| Sbjct 16007609 TACTTGGGCTGATATTATTAACCACGCTAACCTTGGTATGGACGTTATGCATGAACGTAA 16007550 Query 164884 TGCTCACAACTTCCCTCTCGACCTTGCTGCTGCTGA 164919 |||||| || |||| ||| || | ||| ||| ||| Sbjct 16007549 TGCTCATAATTTCCATCTAGATGTAGCTTCTGTTGA 16007514 >seq1 Length=47851208 Score = 91.5 bits (100), Expect = 2e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 161555 TACATTCTTGACGCAGCTGAGGAAGCGGGTGTGGACATCAACTACTCGTGTCGTGCAGGC 161614 |||||||||||||| || ||||| || ||| | ||| | |||||| || | || || Sbjct 46743431 TACATTCTTGACGCTGCGGAGGAGGCCGGTATCGACCTACCCTACTCTTGCAGGGCTGGT 46743490 Query 161615 GCTTGTTCGTCGTGCGCGGGAAAACTCGTCTCTGGCACCGTAGACCAAAGCGACCAGTCC 161674 |||| || || || || || ||| | || || |||||||| || ||| | Sbjct 46743491 TCTTGCTCTTCATGTGCTGGCAAAGTTGTGGAAGGGGGTGTAGACCAGTCAGATCAGAGC 46743550 Query 161675 TTCCTGGACGATGACCAAATCGATTCTGGTTTCATTCTGACTTGTGTTTCTTATCCCACG 161734 ||||| || ||||| || || ||| ||| || | || |||||||| ||||||| | Sbjct 46743551 TTCCTTGATGATGAACAGATTGATGGTGGATTTGTCCTTACTTGTGTGGCTTATCCTTCA 46743610 Query 161735 AGCGATTGTGTGATTGAGACTGAGAAAGAAGAGGAACT 161772 ||| |||| ||||||| | ||||||||||| || Sbjct 46743611 TCTGATGTTGTGCTTGAGACCCACAAAGAAGAGGAGCT 46743648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 557653061629440