Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prunus_20persica_20[refseq_20GCF_5F000346465.2_202017-02-02] 192 sequences; 227,569,171 total letters Query= NC_031935.1 Length=186386 Score E Sequences producing significant alignments: (Bits) Value seq192 643 1e-179 seq2 553 2e-152 seq6 89.7 6e-13 seq1 89.7 6e-13 >seq192 Length=157790 Score = 643 bits (712), Expect = 1e-179 Identities = 746/997 (75%), Gaps = 8/997 (1%) Strand=Plus/Minus Query 177598 TTCTGTAACTGGGTAACCTCCACCAACAATCGTCTGTATGTCGGTTGGTTCGGTGTCCTG 177657 || ||||||||| ||||| ||| | || ||||| || | || ||||| ||||| || Sbjct 1358 TTTTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 1299 Query 177658 ATGATCCCTACGCTGCTCGCTGCTGCTATCTGT-TTCATCGTCGCTTTCGTCGCTGCTCC 177716 ||||||||||| | | | || || ||||| || || | |||||| | ||||| || Sbjct 1298 ATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATTGCTTTCATTGCTGCACC 1240 Query 177717 TCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCCCTGATGTATGGCAACAA 177776 ||| || || || || || || |||||||| || |||| || | | ||||| ||||| Sbjct 1239 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTACTTTATGGAAACAA 1180 Query 177777 CATCATTTCTGGTGCTGTTGTTCCTTCTTCTAACGCTATTGGTCTCCACTTCTATCCCAT 177836 || ||||||||||| || ||||| | ||| ||||| ||| | ||||| || || || Sbjct 1179 TATTATTTCTGGTGCCATTATTCCTACCTCTGCAGCTATAGGTTTGCACTTTTACCCGAT 1120 Query 177837 CTGGGAAGCAGCTTCTCTCGATGAGTGGCTCTACAATGGTGGTCCTTTCCAACTCGTTAT 177896 |||||||| ||||| | ||||| ||| | ||||| |||||||||| |||| || | Sbjct 1119 ATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAACTAATTGT 1060 Query 177897 CTTCCACTTCCTGATCGGTAT--CTATGCATACATGGGTCGTGAGTGGGAACTTTCTTAC 177954 | |||||| | | ||| | || ||| |||||||||||||||||||||||| || | Sbjct 1059 TCTACACTTCTTACTTGGTGTAGCT-TGC-TACATGGGTCGTGAGTGGGAACTTAGTTTC 1002 Query 177955 CGCCTAGGTATGCGTCCCTGGATCTGTGTAGCATACTCTGCTCCAGTCGCCGCAGCATCT 178014 || || |||||||| || ||||| ||| ||||| || ||||| || || || || || Sbjct 1001 CGTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACT 942 Query 178015 GCTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCTATGCCCCTGGGT 178074 ||||| ||| | | ||||| | |||||||| || ||||||| ||||||||| || Sbjct 941 GCTGTTTTCTTGATATATCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCCCTAGGA 882 Query 178075 ATCAGTGGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCAC 178134 ||| || || ||||||| |||| |||| |||||||| |||||||||||||| |||||| Sbjct 881 ATCTCCGGTACTTTCAACTTCATGATTGTATTCCAAGCCGAGCACAACATCCTTATGCAC 822 Query 178135 CCCTTCCACATGTTGGGCGTCGCTGGTGTCTTTGGTGGTTCTCTGTTCAGTGCGATGCAC 178194 || || |||||||| ||||| |||||||| || || || || || |||||||| ||||| Sbjct 821 CCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCAT 762 Query 178195 GGTTCTCTGGTTACTTCCTCGCTGGTTC-GTGAAACCACCGAGAACGAAAGTCAGAACTA 178253 || || |||| || || | | | | || | |||||||| || || ||| | || | Sbjct 761 GGGTCCTTGGTAACCTC-TAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGA 703 Query 178254 TGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCTCATGGTTACTT 178313 ||||||| ||||||||||| ||||| ||||| || ||||| || ||||||||||| || Sbjct 702 AGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATCGTAGCCGCTCATGGTTATTT 643 Query 178314 CGGTCGCCTGATCTTCCAATACGCATCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCT 178373 || || ||||||||||||| || |||||||| || ||||| | || |||||||| Sbjct 642 TGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCT 583 Query 178374 CGCAGCATGGCCTGTTGTCGGTATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATT 178433 || || |||||||| || ||||||||||| || ||| | ||| | ||||| ||||| || Sbjct 582 AGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCTTTAGGTATCAGCACTATGGCTTT 523 Query 178434 CAACCTCAACGGTTTCAACTTCAACCAGTCCATCATGGATAGTCAGGGCAAAGTCCTGAA 178493 |||| | || ||||| || ||||| || || | | ||||||||||| || | || Sbjct 522 CAACTTAAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTGTAATTAA 463 Query 178494 CACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGTATGGAAGTCATGCACGAGCGTAA 178553 || ||||| || || | ||||| ||| |||||||||||||| ||||| || ||||| Sbjct 462 TACTTGGGCTGATATTATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAA 403 Query 178554 TGCTCACAACTTCCCTCTTGACCTCGCTGCTGCTGAA 178590 ||| || || |||||||| || || ||||||| |||| Sbjct 402 TGCCCATAATTTCCCTCTAGATCTAGCTGCTGTTGAA 366 Score = 524 bits (580), Expect = 9e-144 Identities = 726/1014 (72%), Gaps = 2/1014 (0%) Strand=Plus/Plus Query 178839 TTTGATGTACTCGATGACTGGCTTAAGCGTGATCGGTTCGTTTTTGTTGGTTGGTCAGGT 178898 |||||| | | ||||||||| | | | || || ||||||||||| |||||||| || Sbjct 34233 TTTGATATTATGGATGACTGGTTACGGAGGGACCGCTTCGTTTTTGTAGGTTGGTCTGGC 34292 Query 178899 CTTCTTCTGTTCCCTACTGCTTACATGGCACTGGGCGGTTGGCTCACGGGCACAACATTC 178958 || | || || ||| ||| || | || | || |||||| |||| || ||||| || Sbjct 34293 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTCACAGGTACAACCTTT 34352 Query 178959 GTCACCTCGTGGTATACTCACGGGATTGCTTCTTCGTATCTTGAGGGATGTAATTTCCTT 179018 || || || |||||||| || || | || ||| ||| | || || ||||| ||| | Sbjct 34353 GTAACTTCATGGTATACCCATGGATTAGCAAGTTCCTATTTGGAAGGCTGTAACTTCTTA 34412 Query 179019 ACTGCTGCTGTATCAACTCCTGCTGACGCTCTCGGACATTCCCTACTTCTTCTATGGGGT 179078 || || || || || ||||| ||| | | | | || || | | | ||||||||| Sbjct 34413 ACCGCCGCAGTTTCCACTCCGGCTAATAGTTTAGCGCACTCTTTGTTGTTACTATGGGGT 34472 Query 179079 CCAGAAGCTCAGGGAGATTTCGTCCGCTGGCTCCAACTTGGGGGACTATGGCCTTTTGTG 179138 || ||||| || |||||||| || ||| ||| | || || || ||| ||||||| Sbjct 34473 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTTTTGTT 34532 Query 179139 GCGCTCCACGGTGCCTTCGCTCTCATAGGTTTCATGCTTCGGCAGTTTGAAATCGCACG- 179197 || || ||||| || |||| || |||||||| ||| | || || |||||| | || || Sbjct 34533 GCTCTACACGGCGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGA 34592 Query 179198 TCTAGTCGGTATTCGTCCTTACAATGCAATCGCGTTTTCTGGTCCAATTGCTGTCTTTGT 179257 ||| || | | || ||||| ||||||||||| || || |||||||||||||| ||||| Sbjct 34593 TCTGTTCAAT-TGCGACCTTATAATGCAATCGCATTCTCCGGTCCAATTGCTGTTTTTGT 34651 Query 179258 GTCTGTTTTTCTCATGTATCCTCTCGGACAGTCCTCGTGGTTCTTTGCGCCGTCGTTTGG 179317 ||||| || || || ||||| || || ||||| ||||| |||||||| ||||| Sbjct 34652 TTCTGTATTCCTAATTTATCCGCTAGGTCAGTCTGGTTGGTTTTTTGCGCCCAGTTTTGG 34711 Query 179318 AGTTGCAGCGATTTTCCGCTTCCTACTCTTCCTACAGGGCTTCCACAACTGGACGCTCAA 179377 || ||||| || || || ||| | ||||| | || || || || || ||||| | || Sbjct 34712 TGTAGCAGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGAA 34771 Query 179378 CCCGTTCCACATGATGGGTGTAGCAGGTATCCTGGGCGGAGCATTGCTTTGTGCCATTCA 179437 ||| || || |||||||| || || || | |||||| || || | || || ||||| Sbjct 34772 CCCATTTCATATGATGGGAGTTGCTGGGGTGTTGGGCGCTGCTCTGTTATGCGCTATTCA 34831 Query 179438 TGGTGCTACAGTAGAGAACACACTCTTTGAAGACAGTGACCAATCAAATACATTCAAGGC 179497 ||||||||| ||||| || || | |||||||| |||| ||||||||||| || Sbjct 34832 TGGTGCTACCGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGC 34891 Query 179498 ATTCGAGCCTACACAAGAAGAGGAGACCTATTCGATGGTTACTGCCAACCGTTTCTGGTC 179557 || | || || |||| || || || ||||| ||||| || || ||||| || ||||| Sbjct 34892 TTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTC 34951 Query 179558 TCAGATCTTTGGTATCGCCTTCAGCAATAAGCGTTGGCTACATTTCTTTATGTTGTTTGT 179617 || |||||||| | || || |||||| |||||| |||||||||||||||| ||||| Sbjct 34952 CCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGT 35011 Query 179618 TCCTGTCATGGGTCTTTGGACCTCTAGCATTGGTATTATTGGTCTTGCACTTAACCTTAG 179677 || || | ||| | |||| | |||| | | ||||| || |||||||| | Sbjct 35012 ACCAGTAACCGGTTTGTGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCCCTTAACCTACG 35071 Query 179678 AGCTTATGACTTTGTTTCACAAGAGATCAGAGCGGCAGAGGATCCTGAGTTCGAGACGTT 179737 || |||||||| ||||| || || ||| | || || || |||||||| || ||||| || Sbjct 35072 TGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTT 35131 Query 179738 CTATACCAAGAACATCCTATTGAATGAAGGTCTACGTGCTTGGATGGCACCAGTCGATCA 179797 ||| ||||| || || || || || |||||| | |||||||||||||| | ||||| Sbjct 35132 CTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCA 35191 Query 179798 ACCACATGAAAACTTTGTATTTCCTGAAGAAGTATTGCCAAGAGGCAACGCTCT 179851 || ||||||||| || |||| ||||| || || | || | || |||||||| Sbjct 35192 GCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 35245 >seq2 Length=30405870 Score = 553 bits (612), Expect = 2e-152 Identities = 726/997 (73%), Gaps = 8/997 (1%) Strand=Plus/Plus Query 177598 TTCTGTAACTGGGTAACCTCCACCAACAATCGTCTGTATGTCGGTTGGTTCGGTGTCCTG 177657 || ||||||||| ||||| ||| | || |||| || | || ||||| ||||| || Sbjct 16144571 TTTTGTAACTGGATAACCAGCACTGAAAACTGTCTTTACATTGGATGGTTTGGTGTTTTG 16144630 Query 177658 ATGATCCCTACGCTGCTCGCTGCTGCTATCTGTT-TCATCGTCGCTTTCGTCGCTGCTCC 177716 ||||||||||| | | | | || ||||| | || | ||||| | ||||| || Sbjct 16144631 ATGATCCCTACTTTATTGACCACAACT-TCTGTACTTATTATTACTTTCATTGCTGCACC 16144689 Query 177717 TCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCCCTGATGTATGGCAACAA 177776 ||| || || || || || || ||| |||| || |||| || | | ||||| ||||| Sbjct 16144690 TCCAGTAGATATTGATGGTATTCGTAAACCTGTTTCTGGATCTTTACTTTATGGAAACAA 16144749 Query 177777 CATCATTTCTGGTGCTGTTGTTCCTTCTTCTAACGCTATTGGTCTCCACTTCTATCCCAT 177836 || ||||||||||| || ||||| | ||| ||||| ||| | ||||| || || || Sbjct 16144750 TATTATTTCTGGTGCCATTATTCCTACCTCTGCAGCTATAGGTATGCACTTTTACCCGAT 16144809 Query 177837 CTGGGAAGCAGCTTCTCTCGATGAGTGGCTCTACAATGGTGGTCCTTTCCAACTCGTTAT 177896 |||||||| ||||| | ||||| ||| | ||||| |||||||||| |||| || | Sbjct 16144810 ATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAACGGTGGTCCTTATGAACTAATTGT 16144869 Query 177897 CTTCCACTTCCTGATCGGTAT--CTATGCATACATGGGTCGTGAGTGGGAACTTTCTTAC 177954 | |||||| | ||| | || ||| |||||||||||||||||||| || || | Sbjct 16144870 TCTACACTTCTCACTTGGTGTAGCT-TGC-TACATGGGTCGTGAGTGGGAGATTAGTTTC 16144927 Query 177955 CGCCTAGGTATGCGTCCCTGGATCTGTGTAGCATACTCTGCTCCAGTCGCCGCAGCATCT 178014 || || |||| ||| || ||||| ||| ||||| || ||||| || || || || || Sbjct 16144928 CGTCTGGGTAGGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACT 16144987 Query 178015 GCTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCTATGCCCCTGGGT 178074 ||||| ||| | | ||||| | |||||||| || ||||||| ||| |||| || Sbjct 16144988 GCTGTTTTCTTGATATATCCAATTGGTCAAGGAAGCTTTTCTGACGTAATGTCCCTAGGA 16145047 Query 178075 ATCAGTGGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCAC 178134 ||| || || ||||||| |||| |||| |||||||| ||||||||||||| |||||| Sbjct 16145048 ATCTCCGGTACTTTCAACTTCATGATTGTATTCCAAGCTAAGCACAACATCCTTATGCAC 16145107 Query 178135 CCCTTCCACATGTTGGGCGTCGCTGGTGTCTTTGGTGGTTCTCTGTTCAGTGCGATGCAC 178194 || || |||||||| |||| || ||||| || || || || || |||||||| ||||| Sbjct 16145108 CCATTTCACATGTTAGGCGCAGCCGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCAT 16145167 Query 178195 GGTTCTCTGGTTACTTCCTCGCTGGTTC-GTGAAACCACCGAGAACGAAAGTCAGAACTA 178253 || || |||| || ||| | | | || | ||||||| | || ||| | || | Sbjct 16145168 GGGTCCTTGGTAACC-CCTAGTTTGATCAGGGAAACCATAAAAAATGAATCTGCTAATGA 16145226 Query 178254 TGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCTCATGGTTACTT 178313 ||||||| ||||||||||| ||||| ||||| || ||| | || ||||||||||| || Sbjct 16145227 AGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATCATAGCCGCTCATGGTTATTT 16145286 Query 178314 CGGTCGCCTGATCTTCCAATACGCATCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCT 178373 || || ||||||||||||| || |||||||| || |||| | || |||||||| Sbjct 16145287 TGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTTGTTCTTTACATTTCTTCCT 16145346 Query 178374 CGCAGCATGGCCTGTTGTCGGTATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATT 178433 || || |||||||| || ||||||||||| || || | ||| | || || ||||| || Sbjct 16145347 AGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCACTTTAGGTATCAGTACTATGGCTTT 16145406 Query 178434 CAACCTCAACGGTTTCAACTTCAACCAGTCCATCATGGATAGTCAGGGCAAAGTCCTGAA 178493 |||| | || ||||| || ||||| || || | | ||||||||||| || | || Sbjct 16145407 CAACTTAAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTGTAATTAA 16145466 Query 178494 CACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGTATGGAAGTCATGCACGAGCGTAA 178553 || ||||| || || | ||||| | | |||||||||||||| ||||| || ||||| Sbjct 16145467 TACTTGGGCTGATATTATTAACCGCGTTAACCTTGGTATGGAAGTTATGCATGAACGTAA 16145526 Query 178554 TGCTCACAACTTCCCTCTTGACCTCGCTGCTGCTGAA 178590 |||||| || |||||||| || || ||||||| |||| Sbjct 16145527 TGCTCATAATTTCCCTCTAGATCTAGCTGCTGTTGAA 16145563 >seq6 Length=30767194 Score = 89.7 bits (98), Expect = 6e-13 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 178434 CAACCTCAACGGTTTCAACTTCAACCAGTCCATCATGGATAGTCAGGGCAAAGTCCTGAA 178493 ||| ||||| ||||| || ||||| || || | | ||||||||||| || | || Sbjct 16007669 CAAACTCAATGGTTTTAATTTCAATCAATCTGTAGTTGATAGTCAGGGTCGTGTAATTAA 16007610 Query 178494 CACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGTATGGAAGTCATGCACGAGCGTAA 178553 || ||||| || || | |||| ||| ||||||||||| || ||||| || ||||| Sbjct 16007609 TACTTGGGCTGATATTATTAACCACGCTAACCTTGGTATGGACGTTATGCATGAACGTAA 16007550 Query 178554 TGCTCACAACTTCCCTCTTGACCTCGCTGCTGCTGAA 178590 |||||| || |||| ||| || | ||| ||| |||| Sbjct 16007549 TGCTCATAATTTCCATCTAGATGTAGCTTCTGTTGAA 16007513 Score = 82.4 bits (90), Expect = 9e-11 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 178255 GGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCTCATGGTTACTTC 178314 ||||||| ||||||||||| ||||| ||||| || || || || ||||||||||| || Sbjct 12498437 GGTTACATATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGCCGCTCATGGTTATTTT 12498378 Query 178315 GGTCGCCTGATCTTCCAATACGC 178337 || || ||||||||||||| || Sbjct 12498377 GGCCGATTGATCTTCCAATATGC 12498355 >seq1 Length=47851208 Score = 89.7 bits (98), Expect = 6e-13 Identities = 163/239 (68%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 176151 TTTGAGTGTGCTGACGATCAGTATATTCTGGATGCTGCTGAGGAAGCAGGAGTTGAACTC 176210 |||||||| | || ||| || ||||| || ||||| ||||| || || | || || Sbjct 46743410 TTTGAGTGCCCGGATGATGTTTACATTCTTGACGCTGCGGAGGAGGCCGGTATCGACCTA 46743469 Query 176211 AACTACTCGTGCCGCGCTGGTGCCTGTTCGAGTTGTGCAGGAAAACTCATCTCGGGCACG 176270 |||||| ||| | |||||| | || || ||||| || ||| | | || Sbjct 46743470 CCCTACTCTTGCAGGGCTGGTTCTTGCTCTTCATGTGCTGGCAAAGTTGTGGAAGGGGGT 46743529 Query 176271 GTAGATCAAAGCGATCAATCGTTCCTTGATGATGACCAGATCGATGCAGGTTTCATTCTG 176330 ||||| || ||||| |||||||||||||| ||||| |||| || || | || Sbjct 46743530 GTAGACCAGTCAGATCAGAGCTTCCTTGATGATGAACAGATTGATGGTGGATTTGTCCTT 46743589 Query 176331 ACTTGTGTTTCATATCCTACGAGCGATTGTGTGATTGAGACTGAGAAAGAAGAGGAACT 176389 |||||||| | |||||| | ||| |||| ||||||| | ||||||||||| || Sbjct 46743590 ACTTGTGTGGCTTATCCTTCATCTGATGTTGTGCTTGAGACCCACAAAGAAGAGGAGCT 46743648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596305768862720