Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Punica_20granatum_20[genbank_20GCA_5F002201585.1_202017-06-20] 17,405 sequences; 296,383,220 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq1810 87.8 1e-12 >seq1810 Length=4673341 Score = 87.8 bits (96), Expect = 1e-12 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 101759 TGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCC 101818 || |||||||||| ||| | |||| ||| |||||| || ||||||||||| || ||| Sbjct 3075216 TGTGCAATCATGCGAGTCAGGAGAGCATAAGAAGCAATATTGAATGGCACTCCCAAGCCC 3075275 Query 101819 ATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCAT 101861 || |||||||| | ||||||| |||||| || | || ||||| Sbjct 3075276 ATGTCAGCTGAGCGCTGATACATTTGACAAGACAACTCTCCAT 3075318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361174570153655