Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Punica_20granatum_20[genbank_20GCA_5F002201585.1_202017-06-20] 17,405 sequences; 296,383,220 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq2011 89.7 8e-13 >seq2011 Length=5003947 Score = 89.7 bits (98), Expect = 8e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 || ||||| || || | |||||||| | || || || || ||||||||||| | Sbjct 3036904 CCTCCTCTGAGCCTCAGCACCAAATGCAGGGTCGACTCCTTCTGGATATTATAATCCGCC 3036963 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || || |||| |||||| | || ||||| ||||| |||| | ||||||||||||||| Sbjct 3036964 AGGGTCCTGCCATCATCGAGCTGCTTTCCGGCAAAGATCAGCCGCTGCTGATCCGGAGGA 3037023 Query 146171 ATTCCTTCTTTATCTTG 146187 || || || |||||||| Sbjct 3037024 ATACCCTCCTTATCTTG 3037040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743364636537600