Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Punica_20granatum_20[genbank_20GCA_5F002201585.1_202017-06-20] 17,405 sequences; 296,383,220 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq1810 89.7 4e-13 >seq1810 Length=4673341 Score = 89.7 bits (98), Expect = 4e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 20431 CAATTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATG 20490 || || || ||||| ||| || ||||| |||||||||||||| || || ||||| ||| Sbjct 3075334 CAGTTCTATGTTGCAAATGGAGAGTTGTCTTGTCAAATGTATCAGCGCTCAGCTGACATG 3075275 Query 20491 GGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACA 20549 || |||| || || ||||||||||| |||||| || || || ||||||||||| Sbjct 3075274 GGCTTGGGAGTGCCATTCAATATTGCTTCTTATGCTCTCCTGACTCGCATGATTGCACA 3075216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399099323717725