Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Punica_20granatum_20[genbank_20GCA_5F002201585.1_202017-06-20] 17,405 sequences; 296,383,220 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq4399 87.8 4e-12 >seq4399 Length=3202280 Score = 87.8 bits (96), Expect = 4e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 157258 GTACTCGGCCACTCTATTCTCAAAAAAGTTGGTCTTTCCCTGGAGAGAAATCATGTCCAT 157317 |||||| | || || ||||| || ||||||||||| || || || || |||| ||||| Sbjct 383756 GTACTCCCCGACCCTCTTCTCGAAGAAGTTGGTCTTCCCTTGCAGCGATATCAGCTCCAT 383815 Query 157318 CCACTCGAATGGGTTGGCGCAGTTGTACACCTTGTCGTACCCCAGCTGGTTCAGCCAGTA 157377 ||| ||||| |||||||| || ||||||||| || | |||| | |||| Sbjct 383816 CCAGTCGAAGGGGTTGGCCGCGTCGTACACCTTCCCGCAGCCCAACGCCACCAGCAGCCG 383875 Query 157378 GTCCGCCACAAACTTGATGTACT 157400 ||||||||| |||| ||||||| Sbjct 383876 GTCCGCCACGAACTCTATGTACT 383898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073526948415040