Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Punica_20granatum_20[genbank_20GCA_5F002201585.1_202017-06-20] 17,405 sequences; 296,383,220 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq281 95.1 2e-14 >seq281 Length=1258992 Score = 95.1 bits (104), Expect = 2e-14 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 66215 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 66274 ||| || ||||| | || | ||| || | ||| | || | | |||||||| ||| || Sbjct 239860 TCCCCCTTGATCAACATAACGAGCAGTATCATTGAAGACACGTAGCATTGGAACAATGCC 239919 Query 66275 ATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGA 66334 ||| ||||| ||||| ||||| |||||| || ||| |||||||||||||| || ||| Sbjct 239920 ATTAGATGTGCCATTTGTCCCTCTGATATAACTACCAGTTGCACGAATATTATGAACTGA 239979 Query 66335 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 66394 || || || || || || ||| ||| | || || || ||||||||||| || Sbjct 239980 TACCCCAATCCCTCCAGCTGATTTGCTGATGACAGCACACTCCTTCAACGTATCATAAAT 240039 Query 66395 GCCCTCTATACTATCATCCATCATG 66419 || || || || || || ||||| Sbjct 240040 TCCTTCAATGCTGTCCTCTTTCATG 240064 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658029606280200