Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Punica_20granatum_20[genbank_20GCA_5F002201585.1_202017-06-20] 17,405 sequences; 296,383,220 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq5369 87.8 2e-12 >seq5369 Length=1591519 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || ||||| || | ||||| || | |||||| | || || ||| | | Sbjct 1427915 ATGCAAATCTTCGTAAAGACCCTTACTGGTAAGACCATTACCCTTGAGGTTGAGAGCTCC 1427856 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | || || ||||| ||||| || || || || || || || Sbjct 1427855 GACACCATCGATAATGTAAAGGCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAG 1427796 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| || || | | || ||||| |||||||||| | | | | | |||||||||| Sbjct 1427795 CAGAGGCTCATCTTTGCTGGTAAGCAGCTCGAAGATGGCCGCACCTTGGCCGATTATAAC 1427736 Query 24171 ATTCAAAAAGAATCTACA 24188 || || ||||| || ||| Sbjct 1427735 ATCCAGAAAGAGTCCACA 1427718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429844800497775