Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Punica_20granatum_20[genbank_20GCA_5F002201585.1_202017-06-20] 17,405 sequences; 296,383,220 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq1810 89.7 4e-13 >seq1810 Length=4673341 Score = 89.7 bits (98), Expect = 4e-13 Identities = 139/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||| || |||||||| ||||| || ||||| ||||| || | || || | Sbjct 4156965 AATGCAGATCTTTGTCAAGACGCTTACTGGAAAGACCATCACGTTGGAGGTTGAAAGCTC 4156906 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||| || ||| | || || ||| ||| || || || || ||||| ||| || Sbjct 4156905 CGATACCATTGATAATGTCAAGACAAAGATTCAGGACAAGGAGGGAATCCCCCCTGACCA 4156846 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||||| || || | ||| || ||||| | || |||| | ||| |||| |||||||| Sbjct 4156845 GCAAAGGCTGATCTTTGCTGGGAAACAGCTGGAGGATGGCCGAACTTTGGCAGATTATAA 4156786 Query 115465 CATTCAAAAAGAGTCTACT 115483 ||| ||||||||||| ||| Sbjct 4156785 CATCCAAAAAGAGTCGACT 4156767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425253774568600