Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Punica_20granatum_20[genbank_20GCA_5F002201585.1_202017-06-20] 17,405 sequences; 296,383,220 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq4810 131 1e-25 seq5369 107 2e-18 seq3224 104 2e-17 seq2214 104 2e-17 seq790 96.9 3e-15 seq6319 93.3 3e-14 seq1810 91.5 1e-13 seq1932 87.8 1e-12 seq2011 84.2 2e-11 >seq4810 Length=5543293 Score = 131 bits (144), Expect = 1e-25 Identities = 168/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 |||||| | |||||||| |||| || || ||||||||||| || ||||||||||| || Sbjct 518676 CCCTCCCCTCAGCCTCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGC 518617 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 | ||| | ||||||| | || || |||||| | ||||||| ||| |||||| ||| Sbjct 518616 AAGGGTCCTCCCGTCCTCGAGCTGCTTACCCGCAAAGATAAGCCTCTGCTGGTCCGGAGG 518557 Query 16828 CACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885 | |||||| ||||| || || || |||||| | | | ||||| | |||| Sbjct 518556 GATGCCCTCCTTGTCCTGGATCTTGGC--CTTCACGTTATCGATGGTGTCCGAGCTCTCC 518499 Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||||||||| || ||||| || || |||||||| |||||||| Sbjct 518498 ACCTCGAGGGTGATGGTCTTCCCGGTGAGGGTCTTGACAAAGATCTGCAT 518449 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || |||| || || | || || ||||||||||| || ||||||||||||||| Sbjct 517991 CCTCCACGGAGCCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 517932 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | | ||||| | || ||||| || | || |||| ||| |||||| || Sbjct 517931 AAGGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCCGGCGGG 517872 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||| || ||||| || || || ||| || | | | | |||||| | ||| Sbjct 517871 ATGCCTTCCTTGTCCTGGATCTTGGC--CTTGACGTTGTCGATGGTGTCGGAGCTCTCGA 517814 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||||| || ||||| || || ||||| || |||||||| Sbjct 517813 CCTCGAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 517765 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || || | || || || |||||||| || ||||||||||||||| Sbjct 518219 CCTCCGCGAAGACGGAGGACAAGGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCGGCC 518160 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | |||| | | ||||| | || || || || | || |||| ||| |||||| || Sbjct 518159 AAGGTTCGGCCATCCTCGAGCTGCTTCCCGGCGAAGATCAGCCTCTGCTGGTCCGGCGGG 518100 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| ||||| || || ||| ||||| | | | | |||||| | ||| Sbjct 518099 ATCCCCTCCTTGTCCTGGATCTTAGCT--TTCACATTGTCGATGGTGTCGGAGCTCTCGA 518042 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||||| || ||||| || || |||||||| |||||||| Sbjct 518041 CCTCAAGCGTGATGGTCTTGCCGGTGAGAGTCTTGACAAAGATCTGCAT 517993 >seq5369 Length=1591519 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || |||||||||||||| |||||||||||||| | ||| | | ||| Sbjct 1427020 AGGACCAGGTGAAGAGTGGACTCCTTTTGAATGTTGTAGTCGGCAAGGGTCCTACCATCC 1427079 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | || ||||| ||| | ||||| | ||| |||||| || | ||||| ||||| Sbjct 1427080 TCAAGCTGCTTGCCGGCAAAGATAAGTCTCTGCTGGTCCGGTGGGATCCCCTCCTTGTCC 1427139 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 ||||| | ||| || | | | | ||||| | ||| |||| |||||| || Sbjct 1427140 TGAATTTTCGCCTTGACATTGTCAATGGTGTCCGAGCTCTCAACCTCCAGGGTGATTGTC 1427199 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || ||||| || || ||||| |||||||| Sbjct 1427200 TTCCCTGTCAGGGTCTTAACAAAGATCTGCAT 1427231 Score = 98.7 bits (108), Expect = 8e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || || |||||||| || ||||||||||| || | |||| | | ||| Sbjct 1426792 AGCACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTTCTCCCATCC 1426851 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | || || || ||| | || |||| ||| |||||| || | ||||| ||||| Sbjct 1426852 TCAAGCTGCTTCCCAGCAAAGATCAGCCTCTGCTGGTCCGGGGGAATACCCTCCTTGTCC 1426911 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 ||||| | ||| || | | | | |||||| | ||| |||| ||||| || Sbjct 1426912 TGAATTTTCGCCTTAACATTGTCAATAGTGTCTGAGCTCTCAACCTCCAAAGTGATCGTC 1426971 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || |||||||| || ||||| || |||||||| Sbjct 1426972 TTCCCGGTCAGGGTCTTGACGAAGATCTGCAT 1427003 Score = 86.0 bits (94), Expect = 5e-12 Identities = 149/215 (69%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || ||||||||||| || ||||| || || || | ||| | | ||| Sbjct 1427248 AGGACCAGGTGAAGGGTGGACTCCTTCTGGATGTTATAATCTGCGAGGGTCCTCCCATCC 1427307 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || | || || || ||| | || |||| ||| ||||| || | ||||| || || Sbjct 1427308 TCGAGCTGCTTCCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGAATCCCCTCCTTATCC 1427367 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || ||| || | | | | |||||| | |||| || | |||||||| Sbjct 1427368 TGGATCTTGGC--CTTGACATTGTCTATGGTGTCGGAGCTCTCCACCTCAAGGGTGATGG 1427425 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 |||| |||||||| || || ||||| ||||||||| Sbjct 1427426 TTTTCCCGGTCAGGGTCTTCACAAAGATCTGCATT 1427460 >seq3224 Length=4215183 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || |||| || || | || ||||| |||||||| || |||||||||||||| Sbjct 2572711 CCGCCCCGGAGCCGGAGCACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 2572770 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | ||||||||| || ||||| ||| | || |||||||| |||||| || Sbjct 2572771 AGTGTGCGGCCGTCCTCCAGCTGCTTGCCGGCAAAGATGAGCCGCTGCTGGTCCGGGGGG 2572830 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||||| ||||| || | | |||||| | | | | ||||||| || ||| Sbjct 2572831 ATCCCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCGCTGGACTCAACC 2572890 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938 || | ||| || || || || || || || || || || |||||||| || Sbjct 2572891 TCGAGGGTTATCGTCTTCCCCGTGAGGGTCTTCACGAAGATCTGCATCTT 2572940 >seq2214 Length=9977371 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || |||| || || | || ||||| |||||||| || |||||||||||||| Sbjct 6800399 CCGCCCCGGAGCCGGAGCACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 6800458 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | ||||||||| || ||||| ||| | || |||||||| |||||| || Sbjct 6800459 AGTGTGCGGCCGTCCTCCAGCTGCTTGCCGGCAAAGATGAGCCGCTGCTGGTCCGGGGGG 6800518 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||||| ||||| || | | |||||| | | | | ||||||| || ||| Sbjct 6800519 ATCCCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCGCTGGACTCAACC 6800578 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938 || | ||| || || || || || || || || || || |||||||| || Sbjct 6800579 TCGAGGGTTATCGTCTTCCCCGTGAGGGTCTTCACGAAGATCTGCATCTT 6800628 >seq790 Length=1848252 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || ||||||||||| || ||||||||||| || | |||| | | ||| Sbjct 1588213 AGCACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTTCTCCCATCC 1588154 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | || || || ||| | || |||| ||| ||||| || | ||||| ||||| Sbjct 1588153 TCAAGCTGCTTCCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATACCCTCCTTGTCC 1588094 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTC-CG-TTTCCACGGTGATGG 16901 ||||| | ||| || | | | | |||| ||| |||| || || | |||||| | Sbjct 1588093 TGAATTTTCGCCTTAACATTGTCAATGGTGT--CCGAGCTCTCGACCTCAAGGGTGATCG 1588036 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || || ||||| || |||||||| |||||||| Sbjct 1588035 TCTTCCCAGTCAGGGTCTTGACAAAGATCTGCAT 1588002 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || ||||||||||| || ||||| ||||| || | || | ||||| Sbjct 1587757 AGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGAGTCCTTCCGTCC 1587698 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | ||| ||||| ||| |||| | || ||| |||||| || | || || ||||| Sbjct 1587697 TCAAGTTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCCGGGGGGATTCCTTCCTTGTCC 1587638 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 ||| | |||||| | | | ||||| | |||| |||| ||||||||| Sbjct 1587637 TGAATCTTGGCCTTCACATTATCAATGGTGTCCGAGCTCTCCACCTCCAAGGTGATGGTC 1587578 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || || || || || || || |||||||| Sbjct 1587577 TTGCCAGTGAGTGTCTTAACGAAGATCTGCAT 1587546 >seq6319 Length=5966559 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || ||||| |||||||| || |||||||||||||| | ||| | ||||| Sbjct 2708872 AGGACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTCCGGCCGTCC 2708813 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || | || || || || | || |||||||| |||||| || | |||||| || || Sbjct 2708812 TCAAGCTGCTTCCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGGATGCCCTCCTTATCC 2708753 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || |||||| | | | | ||||||| || ||| || | ||| || | Sbjct 2708752 TGGATCTTGGC--CTTCACATTGTCGATCGTGTCGCTGGACTCGACCTCGAGGGTTATCG 2708695 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || || || || || || || || |||||||| Sbjct 2708694 TCTTCCCCGTTAGGGTCTTCACGAAGATCTGCAT 2708661 >seq1810 Length=4673341 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||||| || | || |||| || || || || ||||||||||||||||||||||| Sbjct 4156966 CCTCCTCTGAGACGGAGCACCAGGTGAAGGGTCGATTCCTTTTGTATGTTGTAGTCGGCG 4157025 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | | ||||| | || ||||| ||| | || |||| ||| ||||| || Sbjct 4157026 AGGGTCCTCCCATCCTCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGG 4157085 Query 16829 ACGCCCTCTTTGTCGGCAAT-TTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGT 16887 | || || ||||| ||| ||| | ||||| | | | ||||| | |||| Sbjct 4157086 ATCCCTTCCTTGTCCTGAATCTTGGT-TTTCACATTATCTATGGTGTCCGAGCTCTCCAC 4157144 Query 16888 TTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 || | ||||||||||| || || || || || ||||| ||||||||| Sbjct 4157145 CTCAAGAGTGATGGTTTTACCAGTAAGGGTCTTCACAAAGATCTGCATT 4157193 >seq1932 Length=4064500 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/231 (69%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 16707 ACCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGG 16766 |||| || || || | || || | || || || |||||||| || ||||||||||| | Sbjct 3414350 ACCCACCACGGAGACGGAGCACAAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCG 3414409 Query 16767 CCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAG 16826 | | || | | ||||| | || || || ||| | || |||| ||| |||||| || Sbjct 3414410 CAAGCGTGCGGCCATCCTCGAGCTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCCGGAG 3414469 Query 16827 GCACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTC 16884 | | ||||| ||||| || ||||| ||| || | | | |||||| | ||| Sbjct 3414470 GAATCCCCTCCTTGTCCTGGATCTTTGC--CTTGACGTTATCGATCGTGTCGGAGCTCTC 3414527 Query 16885 CGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || | ||| ||||| || ||||||||||| || || || |||||||| Sbjct 3414528 CACCTCGAGGGTTATGGTCTTCCCGGTCAGCGTCTTCACGAAGATCTGCAT 3414578 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 |||||| | ||||| || || | || || || |||||||| || ||||| |||||||| Sbjct 3415035 CCCTCCCCTGAGCCTGAGCACAAGGTGGAGGGTTGACTCCTTCTGGATGTTATAGTCGGC 3415094 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 | ||| | ||||||| | || || || || | ||||||||||| |||||| || Sbjct 3415095 GAGGGTCCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGCCGCTGCTGGTCCGGCGG 3415154 Query 16828 CACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGT 16887 | ||||| ||||| || | | ||| || | | | |||||| | ||| Sbjct 3415155 GATCCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTATCGATCGTGTCGGAGCTCTCGAC 3415214 Query 16888 TTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||||| || || ||||| || ||||| || || |||||||| Sbjct 3415215 CTCGAGCGTGATAGTCTTGCCGGTGAGGGTTTTCACGAAGATCTGCAT 3415262 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | ||| |||| || || |||||||| ||||| ||||||||||| || Sbjct 3414808 CCACCACGAAGGCGCAGCACCAGGTGGAGGGTGGACTCTTTTTGGATGTTGTAGTCAGCG 3414867 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||||| | || || || || | || |||| ||| |||||| || Sbjct 3414868 AGGGTCCGGCCGTCCTCAAGCTGCTTCCCGGCGAAGATCAGCCTCTGCTGGTCCGGCGGG 3414927 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||||| || || || | | ||| || | | | | |||||| | |||| Sbjct 3414928 ATTCCCTCCTTATCCTGGATCTTCGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCCACC 3414987 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||| || || ||||| || || || || || |||||||| Sbjct 3414988 TCGAGGGTGATCGTCTTCCCGGTGAGGGTCTTCACGAAGATCTGCAT 3415034 >seq2011 Length=5003947 Score = 84.2 bits (92), Expect = 2e-11 Identities = 160/234 (68%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 |||||| | |||| || || | ||||| ||||||||||| || |||||||||||||| Sbjct 3037587 CCCTCCCCTCAGCCGGAGGACGAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 3037646 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 || || | ||||||| | || || || || | || | ||||| |||||| || Sbjct 3037647 CAATGTCCGGCCGTCCTCAAGCTGCTTCCCGGCGAAGATCAAGCGCTGCTGGTCCGGCGG 3037706 Query 16828 CACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885 | || || ||||| || || || ||| || | | | | || ||| | ||| Sbjct 3037707 GATCCCTTCCTTGTCCTGGATCTTAGC--CTTGACGTTGTCGATCGTATCGGAGCTCTCG 3037764 Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 || | |||||||| || ||||| || ||||| || || |||||||| ||| Sbjct 3037765 ACCTCGAGAGTGATGGTCTTGCCGGTGAGGGTTTTCACGAAGATCTGCATATTG 3037818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405002071340950