Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Punica_20granatum_20[genbank_20GCA_5F002201585.1_202017-06-20] 17,405 sequences; 296,383,220 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq2370 149 1e-30 seq2011 145 2e-29 seq1932 141 2e-28 seq6319 140 8e-28 seq3224 140 8e-28 seq2214 140 8e-28 seq4810 114 3e-20 seq1810 114 3e-20 seq790 113 1e-19 seq5369 100 7e-16 seq2440 93.3 1e-13 seq2492 89.7 1e-12 >seq2370 Length=1017971 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || ||||| || | ||| || || ||||| || || || ||| Sbjct 237625 CCACCACGGAGGCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCAGCG 237566 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | ||| || || ||||||||||| ||||| || ||| Sbjct 237565 AGGGTGCGGCCGTCCTCGAGTTGCTTCCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGG 237506 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 ||||| || || |||||||| || || || ||||| || || | || ||| || || Sbjct 237505 ATTCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCGATCGTGTCCGACGACTCCACC 237446 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| |||||||||||||| ||||| ||||| ||||| |||||||| Sbjct 237445 TCGAGGGTGATCGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCAT 237399 >seq2011 Length=5003947 Score = 145 bits (160), Expect = 2e-29 Identities = 171/230 (74%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| || || || || |||| ||| ||||| |||||||| || || ||| Sbjct 3036676 CCACCACGGAGCCTGAGAACAAGGTGAAGGGTGGACTCTTTCTGGATATTGTAATCAGCG 3036735 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| |||||||| | || |||||||| ||||| || | || || | ||| Sbjct 3036736 AGGGTGCGCCCGTCTTCAAGCTGCTTTCCTGCAAAGATGAGCCTTTGCTGGTCAGGCGGG 3036795 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || || || ||||| || || || |||||||| || || | || |||| || Sbjct 3036796 ATCCCCTCCTTGTCCTGAATCTTTGCCTTCACGTTGTCGATGGTGTCTGAGCTC---TCC 3036852 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || |||||||| || || ||||| ||||| |||||||||||||||||||| Sbjct 3036853 ACCTCGAGCGTAATAGTTTTCCCTGTCAGGGTCTTGACGAATATCTGCAT 3036902 Score = 132 bits (146), Expect = 1e-25 Identities = 168/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || |||||||| | || ||||| || | || || || ||||| || || ||||| Sbjct 3037360 CCGCCGCGGAGACGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCGGCT 3037419 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || || || || || ||||||||||| | ||| || ||| Sbjct 3037420 AGGGTGCGGCCGTCCTCCAACTGCTTCCCGGCGAAGATCAGCCTCTGCTGGTCCGGGGGG 3037479 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGA---TTCT 288423 || ||||| ||||| ||||| || || || ||||| || || | || ||| || Sbjct 3037480 ATGCCTTCCTTATCTTGGATCTTGGCCTTGACGTTGTCGATCGTGTC---CGAACTCTCG 3037536 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||||| ||||||||||| ||||||| ||||||||||| |||||||| Sbjct 3037537 ACTTCGAGAGTGATCGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCAT 3037586 Score = 127 bits (140), Expect = 5e-24 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || ||||| || | ||| || || || || || || ||||| Sbjct 3037132 CCACCACGGAGACGGAGAACGAGGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCGGCT 3037191 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || || || || || ||||||||||| | ||| || ||| Sbjct 3037192 AGGGTGCGGCCGTCCTCCAACTGCTTCCCAGCGAAGATCAGCCTCTGCTGGTCCGGCGGG 3037251 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || ||||| ||||| ||||| || || |||||||| || || | || |||| || Sbjct 3037252 ATGCCTTCCTTATCTTGGATCTTGGCCTTCACGTTGTCGATCGTGTCGGAGCTC---TCG 3037308 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | |||||||||||| || || |||||||| ||||| |||||||| Sbjct 3037309 ACCTCCAACGTGATCGTCTTGCCAGTAAGAGTCTTCACGAAGATCTGCAT 3037358 Score = 107 bits (118), Expect = 5e-18 Identities = 141/194 (73%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||||||||| || || || || | || || || | || ||||| || ||| Sbjct 3036940 TCCTTCTGGATATTATAATCCGCCAGGGTCCTGCCATCATCGAGCTGCTTTCCGGCAAAG 3036999 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| ||||| ||| || || || || ||||| || || || || |||||||| Sbjct 3037000 ATCAGCCGCTGCTGATCCGGAGGAATACCCTCCTTATCTTGAATCTTGGCCTTCACGTTG 3037059 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | || |||| || || || | |||||||||||| ||||| |||||||| Sbjct 3037060 TCAATCGTGTCAGAGCTC---TCGACCTCCAACGTGATCGTCTTGCCGGTTAGAGTCTTC 3037116 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 3037117 ACGAAGATCTGCAT 3037130 >seq1932 Length=4064500 Score = 141 bits (156), Expect = 2e-28 Identities = 170/230 (74%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || || || | ||| ||||||||||| || ||||| ||| Sbjct 3414808 CCACCACGAAGGCGCAGCACCAGGTGGAGGGTGGACTCTTTTTGGATGTTGTAGTCAGCG 3414867 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | || || || ||||||||||| | ||| || ||| Sbjct 3414868 AGGGTCCGGCCGTCCTCAAGCTGCTTCCCGGCGAAGATCAGCCTCTGCTGGTCCGGCGGG 3414927 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 ||||| || ||||||||||| ||||| || ||||| || || | || |||| || Sbjct 3414928 ATTCCCTCCTTATCCTGGATCTTCGCCTTGACGTTGTCGATGGTGTCGGAGCTC---TCC 3414984 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||||||||||||||| || ||||| ||||| |||||||| Sbjct 3414985 ACCTCGAGGGTGATCGTCTTCCCGGTGAGGGTCTTCACGAAGATCTGCAT 3415034 Score = 122 bits (134), Expect = 2e-22 Identities = 144/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| |||||||||||||| || || ||||| || | || || || |||||| Sbjct 3415072 TCCTTCTGGATGTTATAGTCGGCGAGGGTCCGGCCGTCCTCGAGCTGCTTACCGGCGAAG 3415131 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || ||||| || ||||| || || || |||||||| ||||| || ||||| Sbjct 3415132 ATAAGCCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTA 3415191 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | || |||| || || ||||||||||| ||||| ||||| || || || Sbjct 3415192 TCGATCGTGTCGGAGCTC---TCGACCTCGAGCGTGATAGTCTTGCCGGTGAGGGTTTTC 3415248 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 3415249 ACGAAGATCTGCAT 3415262 Score = 118 bits (130), Expect = 3e-21 Identities = 146/197 (74%), Gaps = 12/197 (6%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| |||||||| ||||| ||||| || || || | || || || ||||| Sbjct 3414616 TCCTTCTGGATGTTATAGTCCGCGAGTGTGCGGCCATCCTCGAGCTGCTTCCCGGCGAAT 3414675 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||| | ||| || || ||| || ||||| || |||||||| ||||| || || Sbjct 3414676 ATCAGCCTCTGCTGG---TCCGGGGGAATGCCTTCCTTGTCCTGGATCTTCGCCTTGACA 3414732 Query 288400 TTTTCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456 || || || | ||| ||| || || ||||||||||| ||||||||||| || ||| Sbjct 3414733 TTGTCAATCGTGTCGGAGCTC---TCCACCTCGAGCGTGATGGTCTTCCCGGTAAGGGTC 3414789 Query 288457 TTGACGAATATCTGCAT 288473 || ||||| |||||||| Sbjct 3414790 TTCACGAAGATCTGCAT 3414806 Score = 109 bits (120), Expect = 1e-18 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || || |||| || || || ||||| || ||||| || Sbjct 3414352 CCACCACGGAGACGGAGCACAAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGCA 3414411 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 |||||||| || || || | || || || || |||||||| | ||| || || Sbjct 3414412 AGCGTGCGGCCATCCTCGAGCTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCCGGAGGA 3414471 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCT 288423 || || || || |||||||| || || || ||||| || || | ||| ||| || Sbjct 3414472 ATCCCCTCCTTGTCCTGGATCTTTGCCTTGACGTTATCGATCGTGTCGGAGCTC---TCC 3414528 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| || || |||||||||||||| ||||| ||||| |||||||| Sbjct 3414529 ACCTCGAGGGTTATGGTCTTCCCGGTCAGCGTCTTCACGAAGATCTGCAT 3414578 >seq6319 Length=5966559 Score = 140 bits (154), Expect = 8e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || ||||||| || || || || | ||| || || ||||| || ||||||||| Sbjct 2708887 CCGCCCCGGAGTCGGAGGACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 2708828 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | || || || |||||||| || ||||| || ||| Sbjct 2708827 AGGGTCCGGCCGTCCTCAAGCTGCTTCCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGG 2708768 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || ||||||||||| || || ||||| || || || | ||||| || || || Sbjct 2708767 ATGCCCTCCTTATCCTGGATCTTGGCCTTCACATTGTCGATCGTGTCGCTGGACTCGACC 2708708 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || ||||||||||| || || ||||| ||||| |||||||| Sbjct 2708707 TCGAGGGTTATCGTCTTCCCCGTTAGGGTCTTCACGAAGATCTGCAT 2708661 >seq3224 Length=4215183 Score = 140 bits (154), Expect = 8e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || ||||| | || ||||| || | ||| || || ||||| || ||||||||| Sbjct 2572711 CCGCCCCGGAGCCGGAGCACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 2572770 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || || ||||| || ||||| || ||| Sbjct 2572771 AGTGTGCGGCCGTCCTCCAGCTGCTTGCCGGCAAAGATGAGCCGCTGCTGGTCCGGGGGG 2572830 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| ||||| ||||| || || || | ||||| || || || Sbjct 2572831 ATCCCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCGCTGGACTCAACC 2572890 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || ||||||||||| || || ||||| ||||| |||||||| Sbjct 2572891 TCGAGGGTTATCGTCTTCCCCGTGAGGGTCTTCACGAAGATCTGCAT 2572937 >seq2214 Length=9977371 Score = 140 bits (154), Expect = 8e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || ||||| | || ||||| || | ||| || || ||||| || ||||||||| Sbjct 6800399 CCGCCCCGGAGCCGGAGCACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 6800458 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || || ||||| || ||||| || ||| Sbjct 6800459 AGTGTGCGGCCGTCCTCCAGCTGCTTGCCGGCAAAGATGAGCCGCTGCTGGTCCGGGGGG 6800518 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| ||||| ||||| || || || | ||||| || || || Sbjct 6800519 ATCCCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCGCTGGACTCAACC 6800578 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || ||||||||||| || || ||||| ||||| |||||||| Sbjct 6800579 TCGAGGGTTATCGTCTTCCCCGTGAGGGTCTTCACGAAGATCTGCAT 6800625 >seq4810 Length=5543293 Score = 114 bits (126), Expect = 3e-20 Identities = 168/235 (71%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || || ||||| | || ||||| || | ||| || || ||||| || |||| Sbjct 517995 CATG-CCTCCACGGAGCCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGT 517937 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 |||| | || || || || || | || || || ||||||||||| | ||| || Sbjct 517936 CGGCCAAGGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCCG 517877 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCG 288418 ||||| ||||| || |||||||| || || || ||||| || || | ||| ||| Sbjct 517876 GCGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTC- 517818 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| ||||| ||||| || ||||||||||| |||||||| Sbjct 517817 --TCGACCTCGAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 517765 Score = 107 bits (118), Expect = 5e-18 Identities = 141/194 (73%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || |||||||| | || || || || || | || || || |||||| Sbjct 518183 TCCTTCTGGATGTTGTAGTCGGCCAAGGTTCGGCCATCCTCGAGCTGCTTCCCGGCGAAG 518124 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| | ||| || ||||| || || || |||||||| || |||||||| || Sbjct 518123 ATCAGCCTCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTGGATCTTAGCTTTCACATTG 518064 Query 288403 TCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | ||| ||| || || || |||||||| ||||| ||||| ||||||||| Sbjct 518063 TCGATGGTGTCGGAGCTC---TCGACCTCAAGCGTGATGGTCTTGCCGGTGAGAGTCTTG 518007 Query 288460 ACGAATATCTGCAT 288473 || || |||||||| Sbjct 518006 ACAAAGATCTGCAT 517993 Score = 107 bits (118), Expect = 5e-18 Identities = 169/238 (71%), Gaps = 13/238 (5%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| ||||| | || ||||| || | ||| || || ||||| || |||| Sbjct 518451 CATG-CCACCACGGAGGCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGT 518393 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || || || | ||||| || | || || || ||||||||||| | ||| || | Sbjct 518392 CCGCAAGGGTCCTCCCGTCCTCGAGCTGCTTCCCGGCGAAGATCAGCCTCTGCTG---GT 518336 Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GC 288415 | ||| || || || || |||||||| || || |||||||| || || | || || Sbjct 518335 CCGGGGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTCACGTTGTCAATGGTGTCGGAGC 518276 Query 288416 TCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| || |||||||| || || || ||||| ||||| |||||||| Sbjct 518275 TC---TCCACCTCGAGGGTAATCGTCTTACCCGTGAGGGTCTTAACGAAGATCTGCAT 518221 Score = 98.7 bits (108), Expect = 2e-15 Identities = 139/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| || || || | ||||| || | || || || || ||| Sbjct 518639 TCCTTCTGGATGTTGTAGTCCGCAAGGGTCCTCCCGTCCTCGAGCTGCTTACCCGCAAAG 518580 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | ||| || ||||| || || || |||||||| || || |||||||| Sbjct 518579 ATAAGCCTCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTA 518520 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | || |||| || || ||||| ||||| ||||||||||| || |||||| Sbjct 518519 TCGATGGTGTCCGAGCTC---TCCACCTCGAGGGTGATGGTCTTCCCGGTGAGGGTCTTG 518463 Query 288460 ACGAATATCTGCAT 288473 || || |||||||| Sbjct 518462 ACAAAGATCTGCAT 518449 >seq1810 Length=4673341 Score = 114 bits (126), Expect = 3e-20 Identities = 168/235 (71%), Gaps = 12/235 (5%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| | ||| | || || | || | ||| ||||||||| |||||||||||||| Sbjct 4157649 TCCACCTCTGAGACGGAGAACCAAGTGTAGGGTGGATTCTTTTTGAATATTATAGTCGGC 4157708 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || || || || ||||| | || || || || ||||| || | ||| || || || Sbjct 4157709 CAGTGTACGCCCATCTTCAAGCTGCTTCCCAGCAAAGATAAGCCTCTGCTG---GTCCGG 4157765 Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGA 288419 | || ||||| |||||||||||||| | || || || || || | ||| ||| Sbjct 4157766 GGGAATCCCTTCCTTATCCTGGATTTTGGTCTTGACATTATCAATCGTATCCGAGCT--- 4157822 Query 288420 TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||| || || || || |||||||| || || || ||||| ||||| ||||||||| Sbjct 4157823 TTCAACCTCCAGGGTAATCGTCTTGCCAGTGAGGGTCTTCACGAAAATCTGCATT 4157877 Score = 95.1 bits (104), Expect = 3e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||||||||| ||||| || || | || || || || || | ||||| || || ||| Sbjct 4156774 TCTTTTTGGATGTTATAATCTGCCAAAGTTCGGCCATCCTCCAGCTGTTTCCCAGCAAAG 4156833 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| | || || | |||||||| || || ||||| || || | || || || Sbjct 4156834 ATCAGCCTTTGCTGGTCAGGGGGGATTCCCTCCTTGTCCTGAATCTTTGTCTTGACATTA 4156893 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | |||| ||| || || | |||||| ||||| || || || |||||||| Sbjct 4156894 TCAATGGTATCGGAGCTTTCAACCTCCAACGTGATGGTCTTTCCAGTAAGCGTCTTGACA 4156953 Query 288463 AATATCTGCATT 288474 || ||||||||| Sbjct 4156954 AAGATCTGCATT 4156965 Score = 93.3 bits (102), Expect = 1e-13 Identities = 163/235 (69%), Gaps = 12/235 (5%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| || | ||| | || || || |||| || ||| ||||| || || |||||||| Sbjct 4156965 TCCTCCTCTGAGACGGAGCACCAGGTGAAGGGTCGATTCCTTTTGTATGTTGTAGTCGGC 4157024 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT-- 288363 ||| || | || || || | || || || || |||||||| | ||| || ||| Sbjct 4157025 GAGGGTCCTCCCATCCTCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTG---GTCTGG 4157081 Query 288364 -GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGA 288419 ||||| ||||| || ||||| || || | |||||| || ||||| | || |||| Sbjct 4157082 GGGGATCCCTTCCTTGTCCTGAATCTTGGTTTTCACATTATCTATGGTGTCCGAGCTC-- 4157139 Query 288420 TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || || || ||||| || || || || || ||||| || || ||||||||| Sbjct 4157140 -TCCACCTCAAGAGTGATGGTTTTACCAGTAAGGGTCTTCACAAAGATCTGCATT 4157193 Score = 86.0 bits (94), Expect = 1e-11 Identities = 150/217 (69%), Gaps = 6/217 (3%) Strand=Plus/Plus Query 288261 AAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTC 288320 ||| || | ||||| || ||| || |||||||| ||||| || || || || || || Sbjct 4157208 AAGCACCAAATGAAGGGTCGATTCCTTCTGGATATTGTAGTCTGCAAGAGTTCGCCCATC 4157267 Query 288321 TTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATC 288380 || | || || || || || || || | |||||| ||||||||||| || || Sbjct 4157268 CTCGAGCTGCTTCCCAGCAAAAATAAGCCTCTGTTGGTCCGGAGGGATTCCTTCCTTGTC 4157327 Query 288381 CTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGA---TTCTACTTCGAGCGTGAT 288437 ||||||||||| ||||| || || || | || ||| ||| || || || || || Sbjct 4157328 CTGGATTTTCGTCTTCACATTATCAATCGTGTC---CGAACTTTCGACCTCCAGGGTAAT 4157384 Query 288438 CGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||||| || || || || || || || || |||||| Sbjct 4157385 TGTCTTGCCCGTGAGGGTTTTCACAAAAATTTGCATT 4157421 Score = 86.0 bits (94), Expect = 1e-11 Identities = 161/234 (69%), Gaps = 12/234 (5%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| | ||| | || || | || | ||| |||||| ||||| ||||| || || Sbjct 4157877 TCCACCTCTGAGGCGGAGGACCAAGTGGAGGGTGGATTCTTTCTGGATGTTATAATCAGC 4157936 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || || | || || || | || || || || ||||| || | ||| || ||||| Sbjct 4157937 AAGGGTCCTCCCATCCTCGAGCTGCTTCCCAGCAAAGATGAGCCTCTGCTGG---TCTGG 4157993 Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGA 288419 | |||||||| |||||||||||||| | ||||| || || || | || ||| Sbjct 4157994 GGGGATTCCTTCCTTATCCTGGATTTTTGTCTTCACATTGTCAATTGTGTCTGAGCT--- 4158050 Query 288420 TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| || || || || || ||||| || || || ||||| || || || ||||| Sbjct 4158051 TTCGACCTCAAGGGTAATGGTCTTTCCAGTGAGGGTCTTAACAAAGATTTGCAT 4158104 >seq790 Length=1848252 Score = 113 bits (124), Expect = 1e-19 Identities = 158/219 (72%), Gaps = 12/219 (5%) Strand=Plus/Minus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || || || |||| ||| || || ||||| ||||| || ||||| || | || || Sbjct 1587985 AGGACCAGGTGAAGGGTGGACTCCTTCTGGATGTTATAATCTGCGAGGGTCCTCCCATCC 1587926 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTA 288378 || | || || ||||||||||| || | ||| || |||||| || ||||| ||| Sbjct 1587925 TCGAGCTGCTTCCCTGCGAAGATGAGCCTCTGCTGG---TCTGGGGGAATACCTTCCTTA 1587869 Query 288379 TCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCTACTTCGAGCGTG 288435 |||||||| || || || || || ||||| | ||| ||| || || || || ||| Sbjct 1587868 TCCTGGATCTTGGCCTTGACATTGTCTATGGTGTCGGAGCTC---TCCACCTCAAGGGTG 1587812 Query 288436 ATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || |||||||||||||| ||||| || || ||||||||| Sbjct 1587811 ATGGTCTTCCCGGTCAGGGTCTTCACAAAAATCTGCATT 1587773 Score = 98.7 bits (108), Expect = 2e-15 Identities = 139/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || ||||||||||| | ||||| || ||||| | || || || || ||| Sbjct 1587508 TCCTTCTGAATGTTATAGTCGGCCAAGGTGCGGCCATCTTCGAGCTGCTTCCCAGCAAAG 1587449 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | ||| || ||||||||| || || || ||||| || || || || || Sbjct 1587448 ATGAGCCTCTGCTGGTCTGGTGGGATTCCCTCCTTGTCTTGGATCTTGGCCTTAACATTG 1587389 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | ||| |||| ||||| ||||| ||||| ||||| || || || ||||| Sbjct 1587388 TCAATTGTATCGGAGCTC---TCTACCTCGAGAGTGATTGTCTTACCAGTGAGGGTCTTC 1587332 Query 288460 ACGAATATCTGCAT 288473 || || |||||||| Sbjct 1587331 ACAAAAATCTGCAT 1587318 Score = 91.5 bits (100), Expect = 3e-13 Identities = 140/197 (71%), Gaps = 12/197 (6%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || || ||||| || || || | || || || | || || || || ||| Sbjct 1588192 TCCTTCTGAATGTTGTAGTCAGCAAGGGTTCTCCCATCCTCAAGCTGCTTCCCAGCAAAG 1588133 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||| | ||| || |||||| || || || || ||||| |||||||| || || Sbjct 1588132 ATCAGCCTCTGCTGG---TCTGGGGGAATACCCTCCTTGTCCTGAATTTTCGCCTTAACA 1588076 Query 288400 TTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456 || || || | || |||| || || || || |||||||||||||| ||||| ||| Sbjct 1588075 TTGTCAATGGTGTCCGAGCTC---TCGACCTCAAGGGTGATCGTCTTCCCAGTCAGGGTC 1588019 Query 288457 TTGACGAATATCTGCAT 288473 ||||| || |||||||| Sbjct 1588018 TTGACAAAGATCTGCAT 1588002 Score = 89.7 bits (98), Expect = 1e-12 Identities = 137/194 (71%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| |||||||| || || || | |||||| || | ||| || || || || Sbjct 1587736 TCCTTCTGGATGTTATAGTCAGCAAGAGTCCTTCCGTCCTCAAGTTGCTTGCCAGCAAAA 1587677 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| | ||| || ||||||||||| || ||||| || || || ||||| || Sbjct 1587676 ATCAACCTCTGCTGGTCCGGGGGGATTCCTTCCTTGTCCTGAATCTTGGCCTTCACATTA 1587617 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | || |||| || || || | ||||| ||||| || || || ||||| Sbjct 1587616 TCAATGGTGTCCGAGCTC---TCCACCTCCAAGGTGATGGTCTTGCCAGTGAGTGTCTTA 1587560 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 1587559 ACGAAGATCTGCAT 1587546 >seq5369 Length=1591519 Score = 100 bits (110), Expect = 7e-16 Identities = 155/219 (71%), Gaps = 12/219 (5%) Strand=Plus/Plus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || || || |||| ||| || || ||||| ||||| || ||||| || | || || Sbjct 1427248 AGGACCAGGTGAAGGGTGGACTCCTTCTGGATGTTATAATCTGCGAGGGTCCTCCCATCC 1427307 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTA 288378 || | || || ||||| ||||| || | ||| || |||||| || || || ||| Sbjct 1427308 TCGAGCTGCTTCCCTGCAAAGATGAGCCTCTGCTGG---TCTGGGGGAATCCCCTCCTTA 1427364 Query 288379 TCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTG 288435 |||||||| || || || || || ||||| | || |||| || || || || ||| Sbjct 1427365 TCCTGGATCTTGGCCTTGACATTGTCTATGGTGTCGGAGCTC---TCCACCTCAAGGGTG 1427421 Query 288436 ATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || ||||||||||| ||||| || || ||||||||| Sbjct 1427422 ATGGTTTTCCCGGTCAGGGTCTTCACAAAGATCTGCATT 1427460 Score = 96.9 bits (106), Expect = 8e-15 Identities = 141/197 (72%), Gaps = 12/197 (6%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || || ||||| || || || | || || || | || || || || ||| Sbjct 1426813 TCCTTCTGAATGTTGTAGTCAGCAAGGGTTCTCCCATCCTCAAGCTGCTTCCCAGCAAAG 1426872 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||| | ||| || || ||| || || || || ||||| |||||||| || || Sbjct 1426873 ATCAGCCTCTGCTGG---TCCGGGGGAATACCCTCCTTGTCCTGAATTTTCGCCTTAACA 1426929 Query 288400 TTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456 || || |||| || |||| || || || | |||||||||||||||||||| ||| Sbjct 1426930 TTGTCAATAGTGTCTGAGCTC---TCAACCTCCAAAGTGATCGTCTTCCCGGTCAGGGTC 1426986 Query 288457 TTGACGAATATCTGCAT 288473 |||||||| |||||||| Sbjct 1426987 TTGACGAAGATCTGCAT 1427003 Score = 95.1 bits (104), Expect = 3e-14 Identities = 138/194 (71%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || |||||||| || || || | |||||| || | ||| || || || || Sbjct 1427497 TCCTTCTGAATGTTATAGTCAGCAAGAGTTCTTCCGTCCTCGAGTTGCTTCCCAGCAAAA 1427556 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| | ||| || ||||||||||| || || || || || || || || || Sbjct 1427557 ATCAACCTCTGCTGGTCCGGGGGGATTCCTTCCTTGTCTTGAATCTTGGCCTTAACATTG 1427616 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | ||| |||| ||||| ||||||||||| ||||| ||||| || ||||| Sbjct 1427617 TCAATTGTATCAGAGCTC---TCTACCTCGAGCGTGATGGTCTTACCGGTGAGGGTCTTC 1427673 Query 288460 ACGAATATCTGCAT 288473 || || || ||||| Sbjct 1427674 ACAAAAATTTGCAT 1427687 Score = 91.5 bits (100), Expect = 3e-13 Identities = 159/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || || || | || || || ||||| |||||||| || Sbjct 1426549 CCACCACGGAGACGGAGGACAAGGTGGAGGGTCGACTCCTTCTGGATGTTATAGTCTGCA 1426608 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || ||||| | ||| || || ||||||||||| | ||| ||| ||| Sbjct 1426609 AGGGTGCGACCATCTTCAAGTTGCTTCCCAGCGAAGATCAGCCTCTGCTGATCCGGGGGG 1426668 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || || || ||||| || || | || || || || || | ||| ||| || Sbjct 1426669 ATGCCCTCCTTGTCCTGAATCTTTGACTTGACATTATCGATGGTATCAGAACTC---TCG 1426725 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | ||||| |||||||| |||| ||||| || || || ||||| Sbjct 1426726 ACCTCCAAGGTGATGGTCTTCCCAGTCAAGGTCTTCACAAAGATTTGCAT 1426775 >seq2440 Length=3503224 Score = 93.3 bits (102), Expect = 1e-13 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429 ||||| || ||||| || ||||| || || || || |||| ||||||||| || || ||| Sbjct 2148544 CCTTCCTTGTCCTGAATCTTCGCCTTGACATTGTCAATAGTATCGCTCGACTCGACCTCG 2148485 Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||||||||| || || || ||||| |||||||| Sbjct 2148484 AGGGTTATGGTCTTCCCGGTTAGGGTTTTCACGAAGATCTGCAT 2148441 >seq2492 Length=5361119 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429 ||||| || |||||||| || || || || || || |||| |||||| || || ||| Sbjct 3040417 CCTTCCTTGTCCTGGATCTTAGCCTTGACATTGTCGATAGTATCGCTGCTCTCGACCTCG 3040358 Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||||||||| || ||||| ||||| |||||||| Sbjct 3040357 AGAGTGATGGTCTTCCCGGTGAGGGTCTTAACGAAAATCTGCAT 3040314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179391335225590