Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Punica_20granatum_20[genbank_20GCA_5F002201585.1_202017-06-20] 17,405 sequences; 296,383,220 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq4399 125 7e-24 seq4810 104 2e-17 seq3224 102 8e-17 seq2214 102 8e-17 seq2370 98.7 1e-15 seq1810 96.9 3e-15 seq790 96.9 3e-15 seq5369 93.3 4e-14 seq1932 91.5 1e-13 seq6319 87.8 2e-12 >seq4399 Length=3202280 Score = 125 bits (138), Expect = 7e-24 Identities = 494/764 (65%), Gaps = 46/764 (6%) Strand=Plus/Minus Query 52094 CGAGCGCTATTTTATCAAGCACGTGTTGGCGTTCTTCGCCGCCGCCGATAGCATCGTGAA 52153 ||||||| |||| ||| || | | || |||||||||||| | || | ||||| Sbjct 384494 CGAGCGCCATTTCGTCACCCATATCCTCGCTTTCTTCGCCGCCTCTGACGGGATCGTCCT 384435 Query 52154 CATTAACCTCATCGA---GTACATGCAGCGGAACGTTCCGGAACTC-GAGGCGCAATACT 52209 | |||||| || || |||| || || | ||| || ||| ||||| | || Sbjct 384434 CGAGAACCTCGCCGCCCGGTTCATGAAG--GA--GGTCCAGATCTCCGAGGCCCGCGCCT 384379 Query 52210 TTTATAATTTGCAAGTGCTCATCGAGTGCGTGCACACGGAGATGTACAATCTGCTCATTG 52269 | ||| || || | ||| ||| | | ||| | |||||||||| ||||||| | | Sbjct 384378 TCTATGGCTTCCAGATCGCCATTGAGAACATCCACTCCGAGATGTACAGTCTGCTCCTCG 384319 Query 52270 AGCAGCTG-ATAAAAGA-TGAGCACGAGCGCGACACGCTGCTGAATGCGTTCGAGCACGT 52327 || | || || || || | || |||| ||| ||| | ||| ||||| ||| Sbjct 384318 AG-ACCTACATCAAGGACTCCGC-CGAGAAGGACCGCCTGTTCCGGGCGATCGAGACCGT 384261 Query 52328 GCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCGCCAC 52387 || ||||| || ||||| ||||||| ||| |||||||||| || | ||| | Sbjct 384260 CCCCTGCGTGAAGAAGAAGGCGGAGTGGGCCATGCAGTGGATCGA---CGGCTCCGAGTC 384204 Query 52388 GCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTT 52447 | | || ||| | || | || || ||| || ||||| | || || ||||| ||||| Sbjct 384203 GTTCGCGGAGAGGGTGATTGCATTTGCCTGCGTGGAGGGGATCTTCTTCTCCGGGAGCTT 384144 Query 52448 TGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGA 52507 |||||||| | | || | | || | ||||| || || || ||| ||||| Sbjct 384143 CTGTGCCATCTTCTGGCTGAAGAAGCGGGGGCTGATGCCGGGGCTCACCTTCTCGAACGA 384084 Query 52508 GTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCT---CTACTACAA--- 52561 | |||| ||| | ||||| ||||| ||| ||||| || ||||| ||||| | Sbjct 384083 GCTGATCTCGAGGGACGAGGGACTCCACTGCGACTTCGCCTGCCTGATCTACTCCCTCCT 384024 Query 52562 ------GACGCGC-GTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAGG 52614 || || | | || || ||| || | ||| || || | || Sbjct 384023 CCGGTCGAAGCTCAGCGAG-GAGAAAGTGAAGTCG------ATAGTGCG---------GG 383980 Query 52615 AGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCA 52674 | ||||||| ||||| | ||||||| | | |||||||||| || |||| |||| | Sbjct 383979 ACGCGGTGGAGATCGAGAGGGAGTTTGTATGCGACGCGCTGCCGTGCGCGCTGGTGGGGA 383920 Query 52675 TGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGC 52734 |||||| | |||| | ||||||| ||||| |||||||| || ||| ||||| | Sbjct 383919 TGAACGGCGACCTCATGGGGCAGTACATAGAGTTCGTGGCGGACCGGCTGCTGGTGGCGT 383860 Query 52735 TCGGGCAGCCA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCG 52793 | |||| || ||| | | |||| ||| || || || | ||| | || ||| Sbjct 383859 T-GGGCTGCGGGAAGGTGTACGACGCGGCCAACCCCTTCGACTGGATGGAGCTGATATCG 383801 Query 52794 CTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 || | || ||||||||||| ||||||||| | ||||| ||||| Sbjct 383800 CTGCAAGGGAAGACCAACTTCTTCGAGAAGAGGGTCGGGGAGTA 383757 >seq4810 Length=5543293 Score = 104 bits (114), Expect = 2e-17 Identities = 145/201 (72%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478 |||||||||| || |||||||||||| || || || |||||||| || || |||| Sbjct 518188 TTGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTTCGGCCATCCTCGAGCTGCTTCCCGG 518129 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538 |||| || | ||| |||||||| || || || || ||||| ||| || ||| | Sbjct 518128 CGAAGATCAGCCTCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTGGATCTTAGCTTTCA 518069 Query 138539 -ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTT 138597 |||| || | |||||||| ||| ||||| | ||| | || || || || ||||| Sbjct 518068 CATTG-TCGATGGTGTCGGAGCTCTCGACCTCAAGCGTGATGGTCTTGCCGGTGAGAGTC 518010 Query 138598 TTTACAAAAATCTGCATGGCT 138618 || ||||| ||||||||| || Sbjct 518009 TTGACAAAGATCTGCATGCCT 517989 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| | || | | ||||||||| || ||||| | | Sbjct 518642 GACTCCTTCTGGATGTTGTAGTCCGCAAGGGTCCTCCCGTCCTCGAGCTGCTTACCCGCA 518583 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || | ||| ||||||||||| || || || ||||| ||| || || | Sbjct 518582 AAGATAAGCCTCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACG 518523 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | ||||||||||| || | || || || || || || || Sbjct 518522 TTATCGATGGTGTCCGAGCTCTCCACCTCGAGGGTGATGGTCTTCCCGGTGAGGGTCTTG 518463 Query 138601 ACAAAAATCTGCATG 138615 ||||| ||||||||| Sbjct 518462 ACAAAGATCTGCATG 518448 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| | || | | ||||||||| || || |||| Sbjct 518414 GACTCCTTCTGGATGTTGTAGTCCGCAAGGGTCCTCCCGTCCTCGAGCTGCTTCCCGGCG 518355 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || | ||| |||||||| || || || || ||||| ||| || || | Sbjct 518354 AAGATCAGCCTCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTCACG 518295 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||||| ||||||||||| || | ||| ||||| || || || || Sbjct 518294 TTGTCAATGGTGTCGGAGCTCTCCACCTCGAGGGTAATCGTCTTACCCGTGAGGGTCTTA 518235 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 518234 ACGAAGATCTGCAT 518221 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| || ||||| |||||||| || || || | Sbjct 517958 GACTCCTTCTGGATGTTGTAGTCGGCCAAGGTACGGCCATCCTCGAGCTGCTTGCCAGCG 517899 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || | ||| |||||||| || || ||||| ||||| ||| || || | Sbjct 517898 AAGATCAGCCTCTGCTGGTCCGGCGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTGACG 517839 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||||| ||| ||||||| || | || || || || || || || Sbjct 517838 TTGTCGATGGTGTCGGAGCTCTCGACCTCGAGAGTGATGGTCTTGCCGGTGAGGGTCTTG 517779 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 517778 ACGAAGATCTGCAT 517765 >seq3224 Length=4215183 Score = 102 bits (112), Expect = 8e-17 Identities = 141/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | || || |||||| || || || |||| | Sbjct 2572744 GACTCCTTCTGGATGTTGTAGTCGGCGAGTGTGCGGCCGTCCTCCAGCTGCTTGCCGGCA 2572803 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| || ||||| |||||||| || || || || ||||| ||| || || | | Sbjct 2572804 AAGATGAGCCGCTGCTGGTCCGGGGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTCACA 2572863 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | ||||||| | ||||| ||||||| || | ||| || || || || || || Sbjct 2572864 TTG-TCGATGGTGTCGCTGGACTCAACCTCGAGGGTTATCGTCTTCCCCGTGAGGGTCTT 2572922 Query 138600 TACAAAAATCTGCAT 138614 || || |||||||| Sbjct 2572923 CACGAAGATCTGCAT 2572937 >seq2214 Length=9977371 Score = 102 bits (112), Expect = 8e-17 Identities = 141/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | || || |||||| || || || |||| | Sbjct 6800432 GACTCCTTCTGGATGTTGTAGTCGGCGAGTGTGCGGCCGTCCTCCAGCTGCTTGCCGGCA 6800491 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| || ||||| |||||||| || || || || ||||| ||| || || | | Sbjct 6800492 AAGATGAGCCGCTGCTGGTCCGGGGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTCACA 6800551 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | ||||||| | ||||| ||||||| || | ||| || || || || || || Sbjct 6800552 TTG-TCGATGGTGTCGCTGGACTCAACCTCGAGGGTTATCGTCTTCCCCGTGAGGGTCTT 6800610 Query 138600 TACAAAAATCTGCAT 138614 || || |||||||| Sbjct 6800611 CACGAAGATCTGCAT 6800625 >seq2370 Length=1017971 Score = 98.7 bits (108), Expect = 1e-15 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||| || | || || |||||||||||| || |||| Sbjct 237592 GACTCCTTCTGGATGTTGTAATCAGCGAGGGTGCGGCCGTCCTCGAGTTGCTTCCCGGCG 237533 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||| |||||||| || || || || ||||| ||| || || | Sbjct 237532 AAGATCAGGCGCTGCTGGTCCGGCGGGATTCCCTCCTTGTCCTGGATCTTAGCCTTGACG 237473 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||| | |||||||||||||| || | ||| || || ||||| || || Sbjct 237472 TTGTCGATCGTGTCCGACGACTCCACCTCGAGGGTGATCGTCTTCCCCGTCAGGGTCTTC 237413 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 237412 ACGAAGATCTGCAT 237399 >seq1810 Length=4673341 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || |||||||| |||||||||||| | || | | ||||| || || || |||| | Sbjct 4156999 GATTCCTTTTGTATGTTGTAGTCGGCGAGGGTCCTCCCATCCTCAAGCTGCTTGCCGGCA 4157058 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTT-AA 138539 |||| || | ||| ||||| || || || ||||| ||||| ||| | || ||||| | Sbjct 4157059 AAGATCAGCCTCTGCTGGTCTGGGGGGATCCCTTCCTTGTC-CTGAATCTTGGTTTTCAC 4157117 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | || | |||||| | ||||||||| | || | ||||||||||| || || || Sbjct 4157118 ATTATCTATGGTGTCCGAGCTCTCCACCTCAAGAGTGATGGTTTTACCAGTAAGGGTCTT 4157177 Query 138600 TACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 4157178 CACAAAGATCTGCAT 4157192 >seq790 Length=1848252 Score = 96.9 bits (106), Expect = 3e-15 Identities = 164/234 (70%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || | || ||| | || || || | | | |||||||| |||||||||||||| Sbjct 1588229 GCCACCCCTCAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGC 1588170 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || | | ||||| || || || || | | |||| || | ||| ||||| || || Sbjct 1588169 AAGGGTTCTCCCATCCTCAAGCTGCTTCCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGG 1588110 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTA--ATTGTTCCACGGTGTCGGTCGACTCC 138564 ||||| || ||||| ||| |||| | ||| |||| || | |||||| | ||| Sbjct 1588109 AATACCCTCCTTGTC-CTGAATTTTCGCCTTAACATTG-TCAATGGTGTCCGAGCTCTCG 1588052 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCT 138618 ||||| | || | ||| || |||||||| || || ||||| ||||||||| || Sbjct 1588051 ACCTCAAGGGTGATCGTCTTCCCAGTCAGGGTCTTGACAAAGATCTGCATGCCT 1587998 Score = 86.0 bits (94), Expect = 6e-12 Identities = 138/196 (70%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||||||||| ||||| ||||| | ||| || || || ||||| || || | | Sbjct 1588423 GACTCCTTTTGGATGTTATAGTCCGCAAGAGTGCGACCATCTTCAAGTTGCTTCCCAGCA 1588364 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || | ||| || ||||| || ||||| || ||||| ||| | |||| ||| | Sbjct 1588363 AAGATCAGCCTCTGCTGATCCGGGGGAATACCCTCCTTGTCC-TGAATCTTTGCTTTGAC 1588305 Query 138541 TGT-TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | || | ||| || | ||| ||||| | || | || || ||||||| ||||| Sbjct 1588304 ATTATCGATGGTATCAGAACTCTCGACCTCCAAGGTGATGGTCTTCCCAGTCAAGGTTTT 1588245 Query 138600 TACAAAAATCTGCATG 138615 ||||||||||||||| Sbjct 1588244 CACAAAAATCTGCATG 1588229 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/195 (70%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| |||||||| |||||| || || || || ||||| || || || | | Sbjct 1587511 GACTCCTTCTGAATGTTATAGTCGGCCAAGGTGCGGCCATCTTCGAGCTGCTTCCCAGCA 1587452 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| || | ||| ||||| || || || || || ||||| ||| || || | | Sbjct 1587451 AAGATGAGCCTCTGCTGGTCTGGTGGGATTCCCTCCTTGTCTTGGATCTTGGCCTTAACA 1587392 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 |||| | | || |||| ||| ||||||| || | || |||||||| || || || Sbjct 1587391 TTGT-CAATTGTATCGGAGCTCTCTACCTCGAGAGTGATTGTCTTACCAGTGAGGGTCTT 1587333 Query 138600 TACAAAAATCTGCAT 138614 |||||||||||||| Sbjct 1587332 CACAAAAATCTGCAT 1587318 >seq5369 Length=1591519 Score = 93.3 bits (102), Expect = 4e-14 Identities = 163/234 (70%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| |||| |||||| | || | || | | |||||||||||||||||||||||| Sbjct 1427004 GCCTCCTCTCAAACGGAGGACCAGGTGAAGAGTGGACTCCTTTTGAATGTTGTAGTCGGC 1427063 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || | ||||| || || || |||| | |||| || | ||| |||||||| || Sbjct 1427064 AAGGGTCCTACCATCCTCAAGCTGCTTGCCGGCAAAGATAAGTCTCTGCTGGTCCGGTGG 1427123 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCC 138564 || || || ||||| ||| |||| | || |||| || | |||||| | ||| Sbjct 1427124 GATCCCCTCCTTGTC-CTGAATTTTCGCCTTGACATTG-TCAATGGTGTCCGAGCTCTCA 1427181 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCT 138618 ||||| | || | || || || ||||| || || ||||| ||||||||| || Sbjct 1427182 ACCTCCAGGGTGATTGTCTTCCCTGTCAGGGTCTTAACAAAGATCTGCATGCCT 1427235 Score = 89.7 bits (98), Expect = 5e-13 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||| | || || || | | | |||||||| |||||||| ||||| Sbjct 1427461 CCTCCCCGCAGACGAAGCACCAAGTGGAGGGTGGACTCCTTCTGAATGTTATAGTCAGCA 1427520 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| | |||||||||||| || || | | | || | | ||| |||||||| || Sbjct 1427521 AGAGTTCTTCCGTCCTCGAGTTGCTTCCCAGCAAAAATCAACCTCTGCTGGTCCGGGGGG 1427580 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA--ATTGTTCCACGGTGTCGGTCGACTCCA 138565 || ||||| ||||| ||| | || | ||| |||| || | || || | ||| | Sbjct 1427581 ATTCCTTCCTTGTC-TTGAATCTTGGCCTTAACATTG-TCAATTGTATCAGAGCTCTCTA 1427638 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 |||||| ||| | || ||||| || || || || |||||||| |||||| Sbjct 1427639 CCTCGAGCGTGATGGTCTTACCGGTGAGGGTCTTCACAAAAATTTGCATG 1427688 Score = 86.0 bits (94), Expect = 6e-12 Identities = 141/200 (71%), Gaps = 4/200 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| |||||||||||||| | || | | ||||| || || || || | | Sbjct 1426810 GACTCCTTCTGAATGTTGTAGTCAGCAAGGGTTCTCCCATCCTCAAGCTGCTTCCCAGCA 1426869 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-- 138538 |||| || | ||| |||||||| || ||||| || ||||| ||| |||| | ||| Sbjct 1426870 AAGATCAGCCTCTGCTGGTCCGGGGGAATACCCTCCTTGTC-CTGAATTTTCGCCTTAAC 1426928 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 |||| || | ||||| | ||| ||||| | || | ||| || || ||||| || | Sbjct 1426929 ATTG-TCAATAGTGTCTGAGCTCTCAACCTCCAAAGTGATCGTCTTCCCGGTCAGGGTCT 1426987 Query 138599 TTACAAAAATCTGCATGGCT 138618 | || || ||||||||| || Sbjct 1426988 TGACGAAGATCTGCATGCCT 1427007 >seq1932 Length=4064500 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| | || || |||||||| || || |||| | Sbjct 3414385 GACTCCTTCTGGATGTTGTAGTCCGCAAGCGTGCGGCCATCCTCGAGCTGCTTCCCGGCA 3414444 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || | ||| ||||||||||| || || || ||||| ||| ||| || | Sbjct 3414445 AAGATCAGCCTCTGCTGGTCCGGAGGAATCCCCTCCTTGTCCTGGATCTTTGCCTTGACG 3414504 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||||| ||||||||||| || | || || || ||||| || || Sbjct 3414505 TTATCGATCGTGTCGGAGCTCTCCACCTCGAGGGTTATGGTCTTCCCGGTCAGCGTCTTC 3414564 Query 138601 ACAAAAATCTGCATGGCT 138618 || || ||||||||| || Sbjct 3414565 ACGAAGATCTGCATGCCT 3414582 >seq6319 Length=5966559 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | || || |||||| || || || |||| Sbjct 2708854 GACTCCTTCTGGATGTTGTAGTCGGCGAGGGTCCGGCCGTCCTCAAGCTGCTTCCCGGCG 2708795 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| || ||||| |||||||| || || || || || || ||| || || | | Sbjct 2708794 AAGATGAGCCGCTGCTGGTCCGGCGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACA 2708735 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | |||||| | ||||| ||||||| || | ||| || || || || || || Sbjct 2708734 TTG-TCGATCGTGTCGCTGGACTCGACCTCGAGGGTTATCGTCTTCCCCGTTAGGGTCTT 2708676 Query 138600 TACAAAAATCTGCAT 138614 || || |||||||| Sbjct 2708675 CACGAAGATCTGCAT 2708661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496154431911600