Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Punica_20granatum_20[genbank_20GCA_5F002201585.1_202017-06-20] 17,405 sequences; 296,383,220 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq3224 116 2e-21 seq2214 116 2e-21 seq4810 113 3e-20 seq1932 111 1e-19 seq5369 109 4e-19 seq2011 100 2e-16 seq1810 100 2e-16 seq790 100 2e-16 seq6319 96.9 2e-15 seq2370 93.3 3e-14 >seq3224 Length=4215183 Score = 116 bits (128), Expect = 2e-21 Identities = 146/198 (74%), Gaps = 8/198 (4%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | || | || | || |||||||| || |||||||| Sbjct 2572747 TCCTTCTGGATGTTGTAGTCGGCGAGTGTGCGGCCGTCCTCCAGCTGCTTGCCGGCAAAG 2572806 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | |||||||||||| |||||| || || || Sbjct 2572807 ATGAGCCGCTGCTGGTCCGGGGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTCAC--AT 2572864 Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | ||||| || | || |||||| |||| |||||| || || |||||||| ||||| Sbjct 2572865 --TGTCGATGGTGTCGCTGGACTCAACCTCGAGGGTTATCGTCTTCCCCGTGAGGGTCTT 2572922 Query 34967 CACAAAGATCTGCATATT 34984 ||| ||||||||||| || Sbjct 2572923 CACGAAGATCTGCATCTT 2572940 >seq2214 Length=9977371 Score = 116 bits (128), Expect = 2e-21 Identities = 146/198 (74%), Gaps = 8/198 (4%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | || | || | || |||||||| || |||||||| Sbjct 6800435 TCCTTCTGGATGTTGTAGTCGGCGAGTGTGCGGCCGTCCTCCAGCTGCTTGCCGGCAAAG 6800494 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | |||||||||||| |||||| || || || Sbjct 6800495 ATGAGCCGCTGCTGGTCCGGGGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTCAC--AT 6800552 Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | ||||| || | || |||||| |||| |||||| || || |||||||| ||||| Sbjct 6800553 --TGTCGATGGTGTCGCTGGACTCAACCTCGAGGGTTATCGTCTTCCCCGTGAGGGTCTT 6800610 Query 34967 CACAAAGATCTGCATATT 34984 ||| ||||||||||| || Sbjct 6800611 CACGAAGATCTGCATCTT 6800628 >seq4810 Length=5543293 Score = 113 bits (124), Expect = 3e-20 Identities = 166/231 (72%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 |||||||||| ||||| |||| ||| | ||| || ||||| ||||| ||||||| | Sbjct 518675 CCTCCCCTCAGCCTCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCA 518616 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | | | || || ||||| || || ||||| || || | |||||||| | || Sbjct 518615 AGGGTCCTCCCGTCCTCGAGCTGCTTACCCGCAAAGATAAGCCTCTGCTGGTCCGGAGGG 518556 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT--TCACCG-GC-CTC 34930 | ||||||||||| ||||| || || | ||||||| | ||| || ||| Sbjct 518555 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCAC----GTTATCGATGGTGTCCGAGCTCTC 518500 Query 34931 AACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || |||| ||| ||||| || || ||||| ||||| |||||||||||||| Sbjct 518499 CACCTCGAGGGTGATGGTCTTCCCGGTGAGGGTCTTGACAAAGATCTGCAT 518449 Score = 95.1 bits (104), Expect = 8e-15 Identities = 142/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| ||||||||||| || |||| |||| | || | || || ||||| || || || || Sbjct 518868 TTCCTTCTGAATGTTGTAATCCGCAAGGGTGCGCCCGTCCTCGAGCTGCTTCCCAGCGAA 518809 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || | |||||||| |||| | |||||||||||| ||||| ||||| | Sbjct 518808 GATAAGCCTCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTGGATCTTAGCCTTGAC--A 518751 Query 34910 TGCTATCGAT--TCACCG-GC-CTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCT 34965 | | ||||| | ||| || ||| || || | ||| ||||| || ||||| | |||| Sbjct 518750 T--TGTCGATGGTGTCCGAGCTCTCCACCTCCAGGGTGATGGTCTTCCCCGTCAAGGTCT 518693 Query 34966 TCACAAAGATCTGCAT 34981 |||| ||||||||||| Sbjct 518692 TCACGAAGATCTGCAT 518677 Score = 93.3 bits (102), Expect = 3e-14 Identities = 139/195 (71%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | | | |||| |||| || ||||| || ||||| || Sbjct 518183 TCCTTCTGGATGTTGTAGTCGGCCAAGGTTCGGCCATCCTCGAGCTGCTTCCCGGCGAAG 518124 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || | |||||||| |||| | |||||||||||| ||||| ||| || || Sbjct 518123 ATCAGCCTCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTGGATCTTAGCTTTCAC--AT 518066 Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | ||||| || | ||| || || | || ||||| || || ||||||||||| Sbjct 518065 --TGTCGATGGTGTCGGAGCTCTCGACCTCAAGCGTGATGGTCTTGCCGGTGAGAGTCTT 518008 Query 34967 CACAAAGATCTGCAT 34981 |||||||||||||| Sbjct 518007 GACAAAGATCTGCAT 517993 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||||| |||| | | | || || ||||| || ||||| || Sbjct 518411 TCCTTCTGGATGTTGTAGTCCGCAAGGGTCCTCCCGTCCTCGAGCTGCTTCCCGGCGAAG 518352 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || | |||||||| | || | ||||||||||| ||||| || ||| Sbjct 518351 ATCAGCCTCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTCACGTTG 518292 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | ||| || |||| ||| || || || |||||||| ||||| || Sbjct 518291 TCAATGGTGTCGGAGCTCTCCACCTCGAGGGTAATCGTCTTACCCGTGAGGGTCTTAACG 518232 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 518231 AAGATCTGCATA 518220 >seq1932 Length=4064500 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||||| ||| | || |||| || ||||| || |||||||| Sbjct 3414388 TCCTTCTGGATGTTGTAGTCCGCAAGCGTGCGGCCATCCTCGAGCTGCTTCCCGGCAAAG 3414447 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || | |||||||| | || | |||||||||||| ||||| |||||| Sbjct 3414448 ATCAGCCTCTGCTGGTCCGGAGGAATCCCCTCCTTGTCCTGGATCTTTGCCTTGACGTTA 3414507 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || | ||| || |||| ||||||||| || || || || |||||||| Sbjct 3414508 TCGATCGTGTCGGAGCTCTCCACCTCGAGGGTTATGGTCTTCCCGGTCAGCGTCTTCACG 3414567 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 3414568 AAGATCTGCAT 3414578 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 |||||||| | ||| | || | ||| | || || ||||| ||||||||||| | Sbjct 3415036 CCTCCCCTGAGCCTGAGCACAAGGTGGAGGGTTGACTCCTTCTGGATGTTATAGTCGGCG 3415095 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | || | || || ||||| || ||||| || || || || |||||||| |||| Sbjct 3415096 AGGGTCCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGCCGCTGCTGGTCCGGCGGG 3415155 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | |||||||||||| |||||| |||||| | |||| || | ||| || Sbjct 3415156 ATCCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTATCGATCGTGTCGGAGCTCTCGACC 3415215 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 |||| || || || || || ||||| || ||||| ||||||||||| Sbjct 3415216 TCGAGCGTGATAGTCTTGCCGGTGAGGGTTTTCACGAAGATCTGCAT 3415262 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 |||||||||| ||| | || | ||| | || || ||||| ||||||||||||| Sbjct 3414580 CCTCCCCTCAGCCTGAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTATAGTCCGCG 3414639 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || | || |||| || ||||| || ||||| ||||| || | |||||||| | || Sbjct 3414640 AGTGTGCGGCCATCCTCGAGCTGCTTCCCGGCGAATATCAGCCTCTGCTGGTCCGGGGGA 3414699 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | || |||||||| |||||| ||||| | |||| || | ||| || Sbjct 3414700 ATGCCTTCCTTGTCCTGGATCTTCGCCTTGACATTGTCAATCGTGTCGGAGCTCTCCACC 3414759 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 |||| || ||||| || || || || |||||||| |||||||||||| Sbjct 3414760 TCGAGCGTGATGGTCTTCCCGGTAAGGGTCTTCACGAAGATCTGCATA 3414807 Score = 89.7 bits (98), Expect = 3e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||| ||||| || ||||| ||||| | ||| | || | || || Sbjct 3414826 ACCAGGTGGAGGGTGGACTCTTTTTGGATGTTGTAGTCAGCGAGGGTCCGGCCGTCCTCA 3414885 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || ||||| || || || | |||||||| |||| | |||||||| || Sbjct 3414886 AGCTGCTTCCCGGCGAAGATCAGCCTCTGCTGGTCCGGCGGGATTCCCTCCTTATCCTGG 3414945 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 |||||| |||||| | || | || | ||| || |||| ||| || || || Sbjct 3414946 ATCTTCGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCCACCTCGAGGGTGATCGTCTTC 3415005 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || ||||| |||||||| ||||||||||| Sbjct 3415006 CCGGTGAGGGTCTTCACGAAGATCTGCAT 3415034 >seq5369 Length=1591519 Score = 109 bits (120), Expect = 4e-19 Identities = 166/231 (72%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||| ||||| | | |||| ||||| ||| || || |||||||| ||||| | | Sbjct 1427005 CCTCCTCTCAAACGGAGGACCAGGTGAAGAGTGGACTCCTTTTGAATGTTGTAGTCGGCA 1427064 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | | |||| || ||||| || |||||||| || |||| |||||||| | || Sbjct 1427065 AGGGTCCTACCATCCTCAAGCTGCTTGCCGGCAAAGATAAGTCTCTGCTGGTCCGGTGGG 1427124 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT--TCACCG-GC-CTC 34930 | |||||||||||| ||| ||| ||||| || | || || | ||| || ||| Sbjct 1427125 ATCCCCTCCTTGTCCTGAATTTTCGCCTTGAC--AT--TGTCAATGGTGTCCGAGCTCTC 1427180 Query 34931 AACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||| || | ||| || || || || || || ||||| |||||||||||||| Sbjct 1427181 AACCTCCAGGGTGATTGTCTTCCCTGTCAGGGTCTTAACAAAGATCTGCAT 1427231 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||||||||| | | |||| ||||| ||| || ||||| |||||||| || | Sbjct 1427233 CCTCCCCTCAAGCGGAGGACCAGGTGAAGGGTGGACTCCTTCTGGATGTTATAATCTGCG 1427292 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | | |||| || ||||| || || ||||| || || | ||||||||| | || Sbjct 1427293 AGGGTCCTCCCATCCTCGAGCTGCTTCCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGA 1427352 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||||||||| || ||||| ||||| |||| | || | ||| || Sbjct 1427353 ATCCCCTCCTTATCCTGGATCTTGGCCTTGACATTGTCTATGGTGTCGGAGCTCTCCACC 1427412 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || | ||| |||||||| || || || |||||||||||||||||||| Sbjct 1427413 TCAAGGGTGATGGTTTTCCCGGTCAGGGTCTTCACAAAGATCTGCAT 1427459 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || |||||||||| | |||| ||| | |||| |||||||| |||||||| || | Sbjct 1427689 CCACCCCTCAACCGGAGGACCAGGTGGAGTGTGGACTCTTTCTGGATGTTATAATCGGCC 1427748 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 | | | || |||| || ||||| || || ||||| || || | |||||||| | || Sbjct 1427749 AAGGTGCGGCCATCTTCGAGCTGCTTACCAGCAAAGATGAGCCTCTGCTGGTCCGGGGGA 1427808 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTC 34930 | ||||||||||| ||||| || || || ||||||| || | ||| Sbjct 1427809 ATTCCCTCCTTGTCCTGGATCTTGGCCTTTAC--AT--TATCGATGGTGTCGGAGCTCTC 1427864 Query 34931 AACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||| || | ||| ||||| || || || || ||||| || ||||| ||||| Sbjct 1427865 AACCTCAAGGGTAATGGTCTTACCAGTAAGGGTCTTTACGAAGATTTGCAT 1427915 Score = 89.7 bits (98), Expect = 3e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812 ||||||||| || | | |||||||| | ||| || ||||||||||||||||| | Sbjct 1427459 TTCCTCCCCGCAGACGAAGCACCAAGTGGAGGGTGGACTCCTTCTGAATGTTATAGTCAG 1427518 Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872 ||| ||| | | || || || || || || ||||| || | | |||||||| | | Sbjct 1427519 CAAGAGTTCTTCCGTCCTCGAGTTGCTTCCCAGCAAAAATCAACCTCTGCTGGTCCGGGG 1427578 Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAA 34932 | | || |||||||| |||||| || || | || | ||| | ||| | Sbjct 1427579 GGATTCCTTCCTTGTCTTGAATCTTGGCCTTAACATTGTCAATTGTATCAGAGCTCTCTA 1427638 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | |||| || ||||| || || ||||| ||||||||||| || ||||| Sbjct 1427639 CCTCGAGCGTGATGGTCTTACCGGTGAGGGTCTTCACAAAAATTTGCAT 1427687 Score = 84.2 bits (92), Expect = 1e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| || || ||||||||||| ||||| | |||| ||| |||| || Sbjct 1426795 ACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTTCTCCCATCCTCA 1426854 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || ||||| || || | |||||||| | || | ||||||||||| | Sbjct 1426855 AGCTGCTTCCCAGCAAAGATCAGCCTCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGA 1426914 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 || ||| || || | || | || | |||||| || | || || || || Sbjct 1426915 ATTTTCGCCTTAACATTGTCAATAGTGTCTGAGCTCTCAACCTCCAAAGTGATCGTCTTC 1426974 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || || ||||| || ||||||||||| Sbjct 1426975 CCGGTCAGGGTCTTGACGAAGATCTGCAT 1427003 >seq2011 Length=5003947 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||| || | ||||| ||||| || | || || ||||| || ||||| |||| Sbjct 3036904 CCTCCTCTGAGCCTCAGCACCAAATGCAGGGTCGACTCCTTCTGGATATTATAATCCGCC 3036963 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | | ||||||| ||||| ||||||||||| || || || ||||| || | || Sbjct 3036964 AGGGTCCTGCCATCATCGAGCTGCTTTCCGGCAAAGATCAGCCGCTGCTGATCCGGAGGA 3037023 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | |||||||| || |||||| || ||| | |||| ||| | ||| || Sbjct 3037024 ATACCCTCCTTATCTTGAATCTTGGCCTTCACGTTGTCAATCGTGTCAGAGCTCTCGACC 3037083 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || | || || || || || || ||||||||||| |||||||||||| Sbjct 3037084 TCCAACGTGATCGTCTTGCCGGTTAGAGTCTTCACGAAGATCTGCATA 3037131 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 |||||||||| || | || | ||| | ||| || ||||| ||||| ||||| | Sbjct 3037588 CCTCCCCTCAGCCGGAGGACGAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 3037647 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 | | || | || || ||||| || ||||| || || | || |||||||| |||| Sbjct 3037648 AATGTCCGGCCGTCCTCAAGCTGCTTCCCGGCGAAGATCAAGCGCTGCTGGTCCGGCGGG 3037707 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||| |||||||| ||||| |||||| | |||| || | ||| || Sbjct 3037708 ATCCCTTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCGATCGTATCGGAGCTCTCGACC 3037767 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 |||| || ||||| || || ||||| || ||||| |||||||||||||| Sbjct 3037768 TCGAGAGTGATGGTCTTGCCGGTGAGGGTTTTCACGAAGATCTGCATATT 3037817 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 34766 CCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTC 34825 ||| | ||| | ||||| ||| |||||||| || || || || | ||| | || | Sbjct 3036687 CCTGAGAACAAGGTGAAGGGTGGACTCTTTCTGGATATTGTAATCAGCGAGGGTGCGCCC 3036746 Query 34826 ATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTT 34885 || || ||||| ||||| ||||| || || | ||||||||| |||| | ||||||||| Sbjct 3036747 GTCTTCAAGCTGCTTTCCTGCAAAGATGAGCCTTTGCTGGTCAGGCGGGATCCCCTCCTT 3036806 Query 34886 GTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTAT 34945 ||| |||||| || ||| | || | || | ||| || |||| || || Sbjct 3036807 GTCCTGAATCTTTGCCTTCACGTTGTCGATGGTGTCTGAGCTCTCCACCTCGAGCGTAAT 3036866 Query 34946 GGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||||| || || || ||||| || || |||||||| Sbjct 3036867 AGTTTTCCCTGTCAGGGTCTTGACGAATATCTGCAT 3036902 >seq1810 Length=4673341 Score = 100 bits (110), Expect = 2e-16 Identities = 145/198 (73%), Gaps = 14/198 (7%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCG--AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAA 34848 ||||| || |||||||| || | |||| |||| |||| ||||||||||| || |||| Sbjct 4156774 TCTTTTTGGATGTTATAATCTGCCAAAG--TTCGGCCATCCTCCAGCTGTTTCCCAGCAA 4156831 Query 34849 ATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGT-TTGACG 34907 | || || | ||||||||| | || | ||||||||||| |||||| ||| ||||| Sbjct 4156832 AGATCAGCCTTTGCTGGTCAGGGGGGATTCCCTCCTTGTCCTGAATCTT-TGTCTTGAC- 4156889 Query 34908 GATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGT 34963 || |||| || || | ||||| || | || ||||| ||||| || || || Sbjct 4156890 -AT--TATCAATGGTATCGGAGCTTTCAACCTCCAACGTGATGGTCTTTCCAGTAAGCGT 4156946 Query 34964 CTTCACAAAGATCTGCAT 34981 ||| |||||||||||||| Sbjct 4156947 CTTGACAAAGATCTGCAT 4156964 Score = 98.7 bits (108), Expect = 6e-16 Identities = 153/213 (72%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||||| || ||| || || ||||| ||||| | ||| | | |||| || Sbjct 4156984 ACCAGGTGAAGGGTCGATTCCTTTTGTATGTTGTAGTCGGCGAGGGTCCTCCCATCCTCA 4157043 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || |||||||| || || | ||||||||| | || | ||| |||||||| | Sbjct 4157044 AGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATCCCTTCCTTGTCCTGA 4157103 Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT--TCACCG-GC-CTCAACATCGACGGTTATGGT 34948 ||||| ||| || || |||| || | ||| || ||| || || | || ||||| Sbjct 4157104 ATCTTGGTTTTCAC--AT--TATCTATGGTGTCCGAGCTCTCCACCTCAAGAGTGATGGT 4157159 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||| || || || |||||||||||||||||||| Sbjct 4157160 TTTACCAGTAAGGGTCTTCACAAAGATCTGCAT 4157192 >seq790 Length=1848252 Score = 100 bits (110), Expect = 2e-16 Identities = 164/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || ||||||| | | |||||||||| ||| || ||||||||||| ||||| | | Sbjct 1588228 CCACCCCTCAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGCA 1588169 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| ||| |||| || ||||| || || ||||| || || | ||||||||| | || Sbjct 1588168 AGGGTTCTCCCATCCTCAAGCTGCTTCCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGA 1588109 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT--TCACCG-GC-CTC 34930 | ||||||||||| ||| ||| || || || | || || | ||| || ||| Sbjct 1588108 ATACCCTCCTTGTCCTGAATTTTCGCCTTAAC--AT--TGTCAATGGTGTCCGAGCTCTC 1588053 Query 34931 AACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || | ||| || || || || || || ||||| |||||||||||||| Sbjct 1588052 GACCTCAAGGGTGATCGTCTTCCCAGTCAGGGTCTTGACAAAGATCTGCAT 1588002 Score = 86.0 bits (94), Expect = 4e-12 Identities = 162/233 (70%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812 |||||||||| || | | |||||||| | ||| || ||||| ||||||||||| | Sbjct 1587774 TTCCTCCCCTTAAACGAAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCAG 1587715 Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872 ||| | | | | || || || || || || ||||| || | | |||||||| | | Sbjct 1587714 CAAGAGTCCTTCCGTCCTCAAGTTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCCGGGG 1587655 Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT--TCACCG-GC-C 34928 | | || |||||||| |||||| || || || |||| || | ||| || | Sbjct 1587654 GGATTCCTTCCTTGTCCTGAATCTTGGCCTTCAC--AT--TATCAATGGTGTCCGAGCTC 1587599 Query 34929 TCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || || | ||| ||||| || || ||||| ||||| || ||||||||||| Sbjct 1587598 TCCACCTCCAAGGTGATGGTCTTGCCAGTGAGTGTCTTAACGAAGATCTGCAT 1587546 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||||||||| | | |||| ||||| ||| || ||||| |||||||| || | Sbjct 1588000 CCTCCCCTCAAGCGGAGGACCAGGTGAAGGGTGGACTCCTTCTGGATGTTATAATCTGCG 1587941 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | | |||| || ||||| || || || || || || | ||||||||| | || Sbjct 1587940 AGGGTCCTCCCATCCTCGAGCTGCTTCCCTGCGAAGATGAGCCTCTGCTGGTCTGGGGGA 1587881 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | || ||||| || ||||| ||||| |||| | || | ||| || Sbjct 1587880 ATACCTTCCTTATCCTGGATCTTGGCCTTGACATTGTCTATGGTGTCGGAGCTCTCCACC 1587821 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || | ||| ||||| || || || || ||||||||||| |||||||| Sbjct 1587820 TCAAGGGTGATGGTCTTCCCGGTCAGGGTCTTCACAAAAATCTGCAT 1587774 >seq6319 Length=5966559 Score = 96.9 bits (106), Expect = 2e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | ||| | || | || || ||||| || ||||| || Sbjct 2708851 TCCTTCTGGATGTTGTAGTCGGCGAGGGTCCGGCCGTCCTCAAGCTGCTTCCCGGCGAAG 2708792 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| |||| | |||||||| || ||||| || || Sbjct 2708791 ATGAGCCGCTGCTGGTCCGGCGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACATTG 2708732 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || | || ||| || |||| |||||| || || ||||| || |||||||| Sbjct 2708731 TCGATCGTGTCGCTGGACTCGACCTCGAGGGTTATCGTCTTCCCCGTTAGGGTCTTCACG 2708672 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 2708671 AAGATCTGCAT 2708661 >seq2370 Length=1017971 Score = 93.3 bits (102), Expect = 3e-14 Identities = 138/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| || || | ||| | || | || || || || || ||||| || Sbjct 237589 TCCTTCTGGATGTTGTAATCAGCGAGGGTGCGGCCGTCCTCGAGTTGCTTCCCGGCGAAG 237530 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| |||| | ||||||||||| ||||| |||||| Sbjct 237529 ATCAGGCGCTGCTGGTCCGGCGGGATTCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTG 237470 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || | ||| || |||| ||| || || || ||||| || |||||||| Sbjct 237469 TCGATCGTGTCCGACGACTCCACCTCGAGGGTGATCGTCTTCCCCGTCAGGGTCTTCACG 237410 Query 34971 AAGATCTGCATATTCG 34986 ||||||||||| |||| Sbjct 237409 AAGATCTGCATCTTCG 237394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324564737604840