Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Punica_20granatum_20[genbank_20GCA_5F002201585.1_202017-06-20] 17,405 sequences; 296,383,220 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq1810 84.2 2e-11 >seq1810 Length=4673341 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||| || || | || || || ||||||||| || ||| ||| Sbjct 4158104 ATGCAAATCTTTGTTAAGACCCTCACTGGAAAGACCATTACCCTTGAGGTCGAAAGCTCA 4158045 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | || | ||| ||||||| || || || ||| | ||| ||| || Sbjct 4158044 GACACAATTGACAATGTGAAGACAAAAATCCAGGATAAGGAAGGAATCCCCCCAGACCAG 4157985 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||||| || |||||||| || || || | || ||| | || | || ||||||||| Sbjct 4157984 CAGAGGCTCATCTTTGCTGGGAAGCAGCTCGAGGATGGGAGGACCCTTGCTGATTATAAC 4157925 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGT 28762 || || |||||||| || || ||| |||| Sbjct 4157924 ATCCAGAAAGAATCCACCCTCCACTTGGT 4157896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425314561671495