Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Punica_20granatum_20[genbank_20GCA_5F002201585.1_202017-06-20] 17,405 sequences; 296,383,220 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq5034 93.3 5e-14 >seq5034 Length=2374447 Score = 93.3 bits (102), Expect = 5e-14 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 51956 AACATTTAAAATGAATTTGGCTATGACTAAAGCATATAATGCTGATTTTGATGGGGATGA 52015 |||||| | | |||||||| | |||| |||||||||||||||||||||||||||| Sbjct 538467 AACATTCAGATTGAATTTGTCAGTGACATCCCCATATAATGCTGATTTTGATGGGGATGA 538526 Query 52016 AATGAATTTACATGTTCCTCAATCATATGGAGCTACTGCTGAATTACAAGAATTAA 52071 ||||||| | |||||||| || |||| || | ||| || ||| | | ||| ||| Sbjct 538527 AATGAATATGCATGTTCCGCAGTCATTTGAAACTAGAGCAGAAGTCCTGGAACTAA 538582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635039409173400