Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Punica_20granatum_20[genbank_20GCA_5F002201585.1_202017-06-20] 17,405 sequences; 296,383,220 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq5034 87.8 2e-12 >seq5034 Length=2374447 Score = 87.8 bits (96), Expect = 2e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 50406 AACATTTAAAATGAATTTAGCTATGACTAAAGCATATAATGCTGATTTTGATGGGGATGA 50465 |||||| | | ||||||| | |||| |||||||||||||||||||||||||||| Sbjct 538467 AACATTCAGATTGAATTTGTCAGTGACATCCCCATATAATGCTGATTTTGATGGGGATGA 538526 Query 50466 AATGAATTTACATGTTCCTCAATCATATGGAGCTACTGCTGAATTACAAGAATTAA 50521 ||||||| | |||||||| || |||| || | ||| || ||| | | ||| ||| Sbjct 538527 AATGAATATGCATGTTCCGCAGTCATTTGAAACTAGAGCAGAAGTCCTGGAACTAA 538582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628394455180800