Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Punica_20granatum_20[genbank_20GCA_5F002201585.1_202017-06-20] 17,405 sequences; 296,383,220 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq1810 86.0 6e-12 >seq1810 Length=4673341 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 |||||| |||| | | || ||||||||||| || |||||| || |||||| |||||| Sbjct 4157667 AACCAAGTGTAGGGTGGATTCTTTTTGAATATTATAGTCGGCCAGTGTACGCCCATCTTC 4157726 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 ||||| || || | | |||| || | ||| || || || || || ||||| ||||| Sbjct 4157727 AAGCTGCTTCCCAGCAAAGATAAGCCTCTGCTGGTCCGGGGGAATCCCTTCCTTATCCTG 4157786 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 ||||| || | | || | ||||| | || || || | || | ||| || Sbjct 4157787 GATTTTGGTCTTGACATTATCAATCGTATCCGAGCTTTCAACCTCCAGGGTAATCGTCTT 4157846 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| || || || | |||||||||||| Sbjct 4157847 GCCAGTGAGGGTCTTCACGAAAATCTGCAT 4157876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476507507275800