Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Punica_20granatum_20[genbank_20GCA_5F002201585.1_202017-06-20] 17,405 sequences; 296,383,220 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq3224 165 8e-36 seq2214 165 8e-36 seq2370 152 5e-32 seq4810 149 6e-31 seq5369 134 1e-26 seq1932 131 2e-25 seq790 122 8e-23 seq2011 120 3e-22 seq1810 105 6e-18 seq1085 82.4 7e-11 >seq3224 Length=4215183 Score = 165 bits (182), Expect = 8e-36 Identities = 178/233 (76%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693 ||||||| || || || | ||| || || ||||| ||||||||| ||||| ||||||| Sbjct 2572709 CGCCGCCCCGGAGCCGGAGCACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGG 2572768 Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753 ||| ||||| |||| || |||||||||||||| || || || ||||| ||||||| || Sbjct 2572769 CGAGTGTGCGGCCGTCCTCCAGCTGCTTGCCGGCAAAGATGAGCCGCTGCTGGTCCGGGG 2572828 Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCC 41812 | | | |||||||||| ||| || |||| || | | | |||||||| ||||| Sbjct 2572829 GGATCCCCTCCTTGTCCTGGATCTTCGCCTTC-ACATTGTCGATGGTGTCGCTGGACTCA 2572887 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 ||||| | |||||||| || ||||| || ||||| ||||| |||||||| || Sbjct 2572888 ACCTCGAGGGTTATCGTCTTCCCCGTGAGGGTCTTCACGAAGATCTGCATCTT 2572940 >seq2214 Length=9977371 Score = 165 bits (182), Expect = 8e-36 Identities = 178/233 (76%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693 ||||||| || || || | ||| || || ||||| ||||||||| ||||| ||||||| Sbjct 6800397 CGCCGCCCCGGAGCCGGAGCACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGG 6800456 Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753 ||| ||||| |||| || |||||||||||||| || || || ||||| ||||||| || Sbjct 6800457 CGAGTGTGCGGCCGTCCTCCAGCTGCTTGCCGGCAAAGATGAGCCGCTGCTGGTCCGGGG 6800516 Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCC 41812 | | | |||||||||| ||| || |||| || | | | |||||||| ||||| Sbjct 6800517 GGATCCCCTCCTTGTCCTGGATCTTCGCCTTC-ACATTGTCGATGGTGTCGCTGGACTCA 6800575 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 ||||| | |||||||| || ||||| || ||||| ||||| |||||||| || Sbjct 6800576 ACCTCGAGGGTTATCGTCTTCCCCGTGAGGGTCTTCACGAAGATCTGCATCTT 6800628 >seq2370 Length=1017971 Score = 152 bits (168), Expect = 5e-32 Identities = 175/233 (75%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693 |||| || || || || | || || || || ||| ||||||||| ||||| || || | Sbjct 237627 CGCCACCACGGAGGCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCAG 237568 Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753 ||||||||| |||| ||||| ||||| |||||||| ||||||||||| ||||||| | Sbjct 237567 CGAGGGTGCGGCCGTCCTCGAGTTGCTTCCCGGCGAAGATCAGGCGCTGCTGGTCCGGCG 237508 Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCC 41812 | | | |||||||||| || | || || | ||| | | | ||||| ||||||| Sbjct 237507 GGATTCCCTCCTTGTCC-TGGATCTTAGCCTTGACGTTGTCGATCGTGTCCGACGACTCC 237449 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 ||||| | || ||||| || |||||||| ||||| ||||| |||||||| || Sbjct 237448 ACCTCGAGGGTGATCGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 237396 >seq4810 Length=5543293 Score = 149 bits (164), Expect = 6e-31 Identities = 172/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || || || | || || || || ||| ||||||||| ||||| ||||| | Sbjct 518448 GCCACCACGGAGGCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGC 518389 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||||| | | |||| ||||||||||| |||||||| ||||| | ||| ||||||| ||| Sbjct 518388 AAGGGTCCTCCCGTCCTCGAGCTGCTTCCCGGCGAAGATCAGCCTCTGCTGGTCCGGGGG 518329 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 || || |||||||||| ||| || |||| ||| | | | |||||| ||||| Sbjct 518328 AATGCCCTCCTTGTCCTGGATCTTAGCCTTC-ACGTTGTCAATGGTGTCGGAGCTCTCCA 518270 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | || ||||| |||||||| || ||||| ||||| |||||||| Sbjct 518269 CCTCGAGGGTAATCGTCTTACCCGTGAGGGTCTTAACGAAGATCTGCAT 518221 Score = 120 bits (132), Expect = 3e-22 Identities = 171/235 (73%), Gaps = 12/235 (5%) Strand=Plus/Minus Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693 |||| || || || || | || || || || || |||||||||||||| || || | Sbjct 518905 CGCCACCACGGAGGCGGAGGACAAGGTGGAGGGTCGATTCCTTCTGAATGTTGTAATCCG 518846 Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC-GCG 41752 ||||||||| |||| ||||||||||| || ||||| || || | ||| |||||| ||| Sbjct 518845 CAAGGGTGCGCCCGTCCTCGAGCTGCTTCCCAGCGAAGATAAGCCTCTGCTGGTCCGGCG 518786 Query 41753 GGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTC---GCTCG 41807 ||| | | |||||||||| ||| || ||| || | || | ||||| ||| Sbjct 518785 GGATC-CCCTCCTTGTCCTGGATCTTAGCCTTGACATTGTCG--ATGGTGTCCGAGCT-- 518731 Query 41808 ACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||||||| || || || || ||||||| ||||| ||||| |||||||| Sbjct 518730 -CTCCACCTCCAGGGTGATGGTCTTCCCCGTCAAGGTCTTCACGAAGATCTGCAT 518677 Score = 116 bits (128), Expect = 3e-21 Identities = 167/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | || || || || || ||||||||| ||||| ||||||| Sbjct 518219 CCTCCGCGAAGACGGAGGACAAGGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCGGCC 518160 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC-GCGGG 41754 | ||| || | || ||||||||||| |||||||| ||||| | ||| |||||| ||||| Sbjct 518159 AAGGTTCGGCCATCCTCGAGCTGCTTCCCGGCGAAGATCAGCCTCTGCTGGTCCGGCGGG 518100 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | | |||||||||| || | || |||| || | | | |||||| ||| | Sbjct 518099 ATC-CCCTCCTTGTCC-TGGATCTTAGCTTTCACATTGTCGATGGTGTCGGAGCTCTCGA 518042 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||| | ||| || || || || || || ||||| || || ||||||||| Sbjct 518041 CCTCAAGCGTGATGGTCTTGCCGGTGAGAGTCTTGACAAAGATCTGCATG 517992 Score = 109 bits (120), Expect = 5e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || || || | || || || || ||| ||||||||| ||||| ||||||| Sbjct 517992 GCCTCCACGGAGCCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 517933 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | ||| || | || |||||||||||||| ||||| ||||| | ||| ||||||| || Sbjct 517932 CAAGGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCCGGCGG 517873 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | || ||||||||| || | || || | ||| | | | |||||| ||| | Sbjct 517872 GATGCCTTCCTTGTCC-TGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCGA 517814 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | || || || || || || || ||||| ||||| |||||||| Sbjct 517813 CCTCGAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 517765 Score = 107 bits (118), Expect = 2e-18 Identities = 155/215 (72%), Gaps = 8/215 (4%) Strand=Plus/Minus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 |||||| || || ||| ||||||||| ||||| ||||| | ||||| | | |||| || Sbjct 518658 CACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCAAGGGTCCTCCCGTCCTC 518599 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 ||||||||| || || || || || | ||| ||||||| || | || |||||||||| Sbjct 518598 GAGCTGCTTACCCGCAAAGATAAGCCTCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTG 518539 Query 41773 GATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTCCACCTCCACCGTTATCG 41828 ||| || |||| ||| | | ||||| ||| ||||||||| | || || | Sbjct 518538 GATCTTGGCCTTC-ACGTTATCGATGGTGTCCGAGCT---CTCCACCTCGAGGGTGATGG 518483 Query 41829 TTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 | || || || || ||||| || || ||||||||| Sbjct 518482 TCTTCCCGGTGAGGGTCTTGACAAAGATCTGCATG 518448 >seq5369 Length=1591519 Score = 134 bits (148), Expect = 1e-26 Identities = 166/223 (74%), Gaps = 8/223 (4%) Strand=Plus/Plus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | ||||| || || || ||||||||||||||| ||||| | ||||| | | Sbjct 1426786 AGACGGAGCACCAAGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTTCTC 1426845 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || |||||||| || || || ||||| | ||| ||||||| ||||| | |||| Sbjct 1426846 CCATCCTCAAGCTGCTTCCCAGCAAAGATCAGCCTCTGCTGGTCCGGGGGAATACCCTCC 1426905 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTCCACCTCCAC 41820 |||||| ||| |||| || | ||| | | | |||||| ||| ||| ||||||| Sbjct 1426906 TTGTCC-TGAATTTTCGCCTTAACATTGTCAATAGTGTCTGAGCT---CTCAACCTCCAA 1426961 Query 41821 CGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || ||||| || || ||||| ||||| ||||| ||||||||| Sbjct 1426962 AGTGATCGTCTTCCCGGTCAGGGTCTTGACGAAGATCTGCATG 1427004 Score = 109 bits (120), Expect = 5e-19 Identities = 155/214 (72%), Gaps = 8/214 (4%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| || || ||| |||||| |||||||| ||||||| ||||| | | || || Sbjct 1427023 ACCAGGTGAAGAGTGGACTCCTTTTGAATGTTGTAGTCGGCAAGGGTCCTACCATCCTCA 1427082 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 |||||||||||||| || || || | ||| ||||||| || | | |||||||||| || Sbjct 1427083 AGCTGCTTGCCGGCAAAGATAAGTCTCTGCTGGTCCGGTGGGATCCCCTCCTTGTCC-TG 1427141 Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTCCACCTCCACCGTTATCGT 41829 | |||| || | || | | | ||||| ||| ||| ||||||| || || || Sbjct 1427142 AATTTTCGCCTTGACATTGTCAATGGTGTCCGAGCT---CTCAACCTCCAGGGTGATTGT 1427198 Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || || ||||| ||||| || || ||||||||| Sbjct 1427199 CTTCCCTGTCAGGGTCTTAACAAAGATCTGCATG 1427232 Score = 107 bits (118), Expect = 2e-18 Identities = 152/214 (71%), Gaps = 10/214 (5%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| || || ||| ||| ||||| |||||||| |||| | |||||| | || ||| Sbjct 1427707 ACCAGGTGGAGTGTGGACTCTTTCTGGATGTTATAATCGGCCAAGGTGCGGCCATCTTCG 1427766 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 |||||||| || || || || || | ||| ||||||| ||||| | |||||||||| | Sbjct 1427767 AGCTGCTTACCAGCAAAGATGAGCCTCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGG 1427826 Query 41774 ATTT-----TTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCG 41828 || | ||| | | | ||| | |||||| ||| ||||| | || || | Sbjct 1427827 ATCTTGGCCTTTACATTATCGATG-----GTGTCGGAGCTCTCAACCTCAAGGGTAATGG 1427881 Query 41829 TTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | ||||| || || ||||||||||| || ||||| Sbjct 1427882 TCTTACCAGTAAGGGTCTTTACGAAGATTTGCAT 1427915 Score = 105 bits (116), Expect = 6e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| || || ||| ||||||||| |||||||| || | |||||| | | | || ||| Sbjct 1427251 ACCAGGTGAAGGGTGGACTCCTTCTGGATGTTATAATCTGCGAGGGTCCTCCCATCCTCG 1427310 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 |||||||| || || || || || | ||| ||||| | ||||| | |||||| ||| || Sbjct 1427311 AGCTGCTTCCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGAATCCCCTCCTTATCC-TG 1427369 Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 | || || | || | | | |||||| ||||||||| | || || ||||| Sbjct 1427370 GATCTTGGCCTTGACATTGTCTATGGTGTCGGAGCTCTCCACCTCAAGGGTGATGGTTTT 1427429 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || ||||| ||||| || || |||||||| Sbjct 1427430 CCCGGTCAGGGTCTTCACAAAGATCTGCAT 1427459 Score = 102 bits (112), Expect = 8e-17 Identities = 164/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||| || || ||| ||||||||||||||||||||| | Sbjct 1427461 CCTCCCCGCAGACGAAGCACCAAGTGGAGGGTGGACTCCTTCTGAATGTTATAGTCAGCA 1427520 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || | |||| ||||| ||||| || || || |||| | ||| ||||||| ||| Sbjct 1427521 AGAGTTCTTCCGTCCTCGAGTTGCTTCCCAGCAAAAATCAACCTCTGCTGGTCCGGGGGG 1427580 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGA---CTCC 41812 | | ||||||| | ||| | || || | ||| | || | ||| | || ||| Sbjct 1427581 ATTCCTTCCTTGT-CTTGAATCTTGGCCTTAACATTGTCA-ATTGTATC-AGAGCTCTCT 1427637 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||| | ||| || || ||||| || || ||||| || ||||| |||||| Sbjct 1427638 ACCTCGAGCGTGATGGTCTTACCGGTGAGGGTCTTCACAAAAATTTGCATG 1427688 Score = 93.3 bits (102), Expect = 4e-14 Identities = 109/146 (75%), Gaps = 1/146 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || || || ||||||||| ||||||||||| | Sbjct 1426549 CCACCACGGAGACGGAGGACAAGGTGGAGGGTCGACTCCTTCTGGATGTTATAGTCTGCA 1426608 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || || || ||||| || ||||| ||||| | ||| || |||| ||| Sbjct 1426609 AGGGTGCGACCATCTTCAAGTTGCTTCCCAGCGAAGATCAGCCTCTGCTGATCCGGGGGG 1426668 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG 41781 | || |||||||||| ||| | |||| Sbjct 1426669 ATGCCCTCCTTGTCC-TGAATCTTTG 1426693 >seq1932 Length=4064500 Score = 131 bits (144), Expect = 2e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||| || || || || ||||||||| ||||| ||||| | Sbjct 3414352 CCACCACGGAGACGGAGCACAAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGCA 3414411 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || ||||||||||| ||||| || ||||| | ||| ||||||| ||| Sbjct 3414412 AGCGTGCGGCCATCCTCGAGCTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCCGGAGGA 3414471 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| || | ||||| | ||| | | |||||| |||||| Sbjct 3414472 ATCCCCTCCTTGTCC-TGGATCTTTGCCTTGACGTTATCGATCGTGTCGGAGCTCTCCAC 3414530 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||| | ||||| || || || ||||||||||| ||||| ||||||||| Sbjct 3414531 CTCGAGGGTTATGGTCTTCCCGGTCAGCGTCTTCACGAAGATCTGCATG 3414579 Score = 131 bits (144), Expect = 2e-25 Identities = 157/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||| || || || || ||||||||| ||||||||||| | ||| ||||| | || || Sbjct 3414597 CACGAGGTGGAGGGTCGACTCCTTCTGGATGTTATAGTCCGCGAGTGTGCGGCCATCCTC 3414656 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 ||||||||| |||||||||||||| | ||| ||||||| ||||| || ||||||||| | Sbjct 3414657 GAGCTGCTTCCCGGCGAATATCAGCCTCTGCTGGTCCGGGGGAATGCCTTCCTTGTCC-T 3414715 Query 41773 GATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831 | | || || | || | | | |||||| ||||||||| | ||| || || | Sbjct 3414716 GGATCTTCGCCTTGACATTGTCAATCGTGTCGGAGCTCTCCACCTCGAGCGTGATGGTCT 3414775 Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | || || || ||||| ||||| |||||||| Sbjct 3414776 TCCCGGTAAGGGTCTTCACGAAGATCTGCAT 3414806 Score = 120 bits (132), Expect = 3e-22 Identities = 157/212 (74%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||| || || || || ||||||||| ||||||||||||| |||||| || |||| || Sbjct 3415053 CACAAGGTGGAGGGTTGACTCCTTCTGGATGTTATAGTCGGCGAGGGTCCGGCCGTCCTC 3415112 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC-GCGGGAACGCTCTCCTTGTCCA 41771 ||||||||| |||||||| || || ||||| |||||| |||||| | | |||||||||| Sbjct 3415113 GAGCTGCTTACCGGCGAAGATAAGCCGCTGCTGGTCCGGCGGGATC-CCCTCCTTGTCC- 3415170 Query 41772 TGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTT 41830 || | || || | ||| | | |||||| ||| ||||| | ||| || || Sbjct 3415171 TGGATCTTCGCCTTGACGTTATCGATCGTGTCGGAGCTCTCGACCTCGAGCGTGATAGTC 3415230 Query 41831 TTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || || || || || ||||| |||||||| Sbjct 3415231 TTGCCGGTGAGGGTTTTCACGAAGATCTGCAT 3415262 >seq790 Length=1848252 Score = 122 bits (134), Expect = 8e-23 Identities = 163/223 (73%), Gaps = 8/223 (4%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | ||||| || || ||| ||||||||||||||| ||||| | ||||| | | Sbjct 1588219 AGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTTCTC 1588160 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || |||||||| || || || ||||| | ||| ||||| | ||||| | |||| Sbjct 1588159 CCATCCTCAAGCTGCTTCCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATACCCTCC 1588100 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTCCACCTCCAC 41820 |||||| ||| |||| || | ||| | | | ||||| ||| ||| ||||| | Sbjct 1588099 TTGTCC-TGAATTTTCGCCTTAACATTGTCAATGGTGTCCGAGCT---CTCGACCTCAAG 1588044 Query 41821 CGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || ||||| || || ||||| ||||| || || ||||||||| Sbjct 1588043 GGTGATCGTCTTCCCAGTCAGGGTCTTGACAAAGATCTGCATG 1588001 Score = 105 bits (116), Expect = 6e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| || || ||| ||||||||| |||||||| || | |||||| | | | || ||| Sbjct 1587982 ACCAGGTGAAGGGTGGACTCCTTCTGGATGTTATAATCTGCGAGGGTCCTCCCATCCTCG 1587923 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 |||||||| || ||||| || || | ||| ||||| | ||||| | ||||| ||| || Sbjct 1587922 AGCTGCTTCCCTGCGAAGATGAGCCTCTGCTGGTCTGGGGGAATACCTTCCTTATCC-TG 1587864 Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 | || || | || | | | |||||| ||||||||| | || || || || Sbjct 1587863 GATCTTGGCCTTGACATTGTCTATGGTGTCGGAGCTCTCCACCTCAAGGGTGATGGTCTT 1587804 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || ||||| ||||| || ||||||||||| Sbjct 1587803 CCCGGTCAGGGTCTTCACAAAAATCTGCAT 1587774 Score = 100 bits (110), Expect = 3e-16 Identities = 155/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | || || || || ||| ||||||||||||||||||||||| | |||||| Sbjct 1587535 AGACGAAGGACAAGGTGGAGGGTGGACTCCTTCTGAATGTTATAGTCGGCCAAGGTGCGG 1587476 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || ||||||||||| || || || || || | ||| ||||| | || | | |||| Sbjct 1587475 CCATCTTCGAGCTGCTTCCCAGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATTCCCTCC 1587416 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGT 41823 |||| | || | || || | ||| | | | || ||| ||| ||||| | || Sbjct 1587415 TTGT-CTTGGATCTTGGCCTTAACATTGTCAATTGTATCGGAGCTCTCTACCTCGAGAGT 1587357 Query 41824 TATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || ||||| || || ||||| || ||||||||||| Sbjct 1587356 GATTGTCTTACCAGTGAGGGTCTTCACAAAAATCTGCAT 1587318 Score = 100 bits (110), Expect = 3e-16 Identities = 166/233 (71%), Gaps = 10/233 (4%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || | || ||| | ||||| || || ||| ||||||||| ||||||||||| | Sbjct 1587772 CCTCCCCTTAAACGAAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCAGCA 1587713 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || | |||| || || |||||||| || || |||| | ||| ||||||| ||| Sbjct 1587712 AGAGTCCTTCCGTCCTCAAGTTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCCGGGGGG 1587653 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTTCA-ACGACGACACAGTGTC---GCTCGACT 41810 | | ||||||||| ||| | || | ||||| | | | | ||||| ||| || Sbjct 1587652 ATTCCTTCCTTGTCC-TGAATCTTGGCCTTCACATTATCA-ATGGTGTCCGAGCT---CT 1587598 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||||||| || || || || || || || ||||| ||||| ||||||||| Sbjct 1587597 CCACCTCCAAGGTGATGGTCTTGCCAGTGAGTGTCTTAACGAAGATCTGCATG 1587545 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || || || |||||| || ||||||||||| | Sbjct 1588456 CCACCACGGAGACGGAGGACAAGGTGAAGGGTCGACTCCTTTTGGATGTTATAGTCCGCA 1588397 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || || ||||| || || || ||||| | ||| || |||| |||| Sbjct 1588396 AGAGTGCGACCATCTTCAAGTTGCTTCCCAGCAAAGATCAGCCTCTGCTGATCCGGGGGA 1588337 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| ||| | ||||||| || | | || || ||| || Sbjct 1588336 ATACCCTCCTTGTCC-TGAATCTTTGCTTTGACATTATCGATGGTATCAGAACTCTCGAC 1588278 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||| || || || || || |||| || || || |||||||||||| Sbjct 1588277 CTCCAAGGTGATGGTCTTCCCAGTCAAGGTTTTCACAAAAATCTGCATG 1588229 >seq2011 Length=5003947 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || ||||| ||||||||||||||| || |||| Sbjct 3037132 CCACCACGGAGACGGAGAACGAGGTGGAGCGTCGACTCCTTCTGAATGTTGTAATCGGCT 3037191 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| || | |||||| || ||||| ||||| | ||| ||||||| || Sbjct 3037192 AGGGTGCGGCCGTCCTCCAACTGCTTCCCAGCGAAGATCAGCCTCTGCTGGTCCGGCGGG 3037251 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || ||||| || ||| || |||| ||| | | | |||||| ||| || Sbjct 3037252 ATGCCTTCCTTATCTTGGATCTTGGCCTTC-ACGTTGTCGATCGTGTCGGAGCTCTCGAC 3037310 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| ||| ||||| || || || || ||||| ||||| |||||||| Sbjct 3037311 CTCCAACGTGATCGTCTTGCCAGTAAGAGTCTTCACGAAGATCTGCAT 3037358 Score = 109 bits (120), Expect = 5e-19 Identities = 155/214 (72%), Gaps = 8/214 (4%) Strand=Plus/Plus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||||| |||||| || ||||||||| || ||||| || | ||||| | | || || Sbjct 3036921 CACCAAATGCAGGGTCGACTCCTTCTGGATATTATAATCCGCCAGGGTCCTGCCATCATC 3036980 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 ||||||||| ||||| || ||||| ||||| || |||| |||| | |||||| | | | Sbjct 3036981 GAGCTGCTTTCCGGCAAAGATCAGCCGCTGCTGATCCGGAGGAATACCCTCCTTAT-CTT 3037039 Query 41773 GATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTCCACCTCCACCGTTATCG 41828 || | || || | ||| | | | ||||| ||| ||| ||||||| ||| |||| Sbjct 3037040 GAATCTTGGCCTTCACGTTGTCAATCGTGTCAGAGCT---CTCGACCTCCAACGTGATCG 3037096 Query 41829 TTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | || || || || ||||| ||||| |||||||| Sbjct 3037097 TCTTGCCGGTTAGAGTCTTCACGAAGATCTGCAT 3037130 >seq1810 Length=4673341 Score = 105 bits (116), Expect = 6e-18 Identities = 159/222 (72%), Gaps = 8/222 (4%) Strand=Plus/Plus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | |||||| || || || ||||| || ||||| ||||||| |||||| | | Sbjct 4156975 AGACGGAGCACCAGGTGAAGGGTCGATTCCTTTTGTATGTTGTAGTCGGCGAGGGTCCTC 4157034 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || |||||||||||||| || ||||| | ||| ||||| | ||| | | ||| Sbjct 4157035 CCATCCTCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATCCCTTCC 4157094 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTCCACCTCCAC 41820 |||||| ||| | || | || || | | ||||| ||| ||||||||| | Sbjct 4157095 TTGTCC-TGAATCTTGGTTTTCACATTATCTATGGTGTCCGAGCT---CTCCACCTCAAG 4157150 Query 41821 CGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || |||||||| || || ||||| || || |||||||| Sbjct 4157151 AGTGATGGTTTTACCAGTAAGGGTCTTCACAAAGATCTGCAT 4157192 Score = 93.3 bits (102), Expect = 4e-14 Identities = 140/195 (72%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 41672 TCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 41731 |||||||||||||| || || | ||||| | | | || || |||||||| || || ||| Sbjct 4157458 TCCTTCTGAATGTTGTAATCAGCAAGGGTCCTCCCATCCTCCAGCTGCTTCCCAGCAAAT 4157517 Query 41732 ATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCA-ACGA 41790 || || | ||| ||||||| ||||| | ||||| ||| |||||| ||||| | | Sbjct 4157518 ATGAGCCTCTGCTGGTCCGGGGGAATCCCTTCCTTATCCTGGATTTTGGTCTTCACATTA 4157577 Query 41791 CGACACAGTGTC---GCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTT 41847 | | ||||| ||| || ||||||| || || || || || || || ||||| Sbjct 4157578 TCA-ATCGTGTCCGAGCT---TTCGACCTCCAAGGTAATGGTCTTGCCAGTAAGGGTCTT 4157633 Query 41848 TACGAAAATCTGCAT 41862 |||||||||||||| Sbjct 4157634 CACGAAAATCTGCAT 4157648 Score = 84.2 bits (92), Expect = 2e-11 Identities = 154/222 (69%), Gaps = 8/222 (4%) Strand=Plus/Plus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 || || | ||||| ||| || || |||||||| || || ||||| | || || ||| Sbjct 4157203 AGCCGAAGCACCAAATGAAGGGTCGATTCCTTCTGGATATTGTAGTCTGCAAGAGTTCGC 4157262 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || ||||||||||| || || || || || | ||||||||||| || | | ||| Sbjct 4157263 CCATCCTCGAGCTGCTTCCCAGCAAAAATAAGCCTCTGTTGGTCCGGAGGGATTCCTTCC 4157322 Query 41765 TTGTCCATGATTTTTTGCTTCA-ACGACGACACAGTGTCGCTCGA---CTCCACCTCCAC 41820 |||||| |||||| ||||| | | | | ||||| ||| || ||||||| Sbjct 4157323 TTGTCCTGGATTTTCGTCTTCACATTATCA-ATCGTGTC---CGAACTTTCGACCTCCAG 4157378 Query 41821 CGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || || || ||||| || || || || ||||| ||||| Sbjct 4157379 GGTAATTGTCTTGCCCGTGAGGGTTTTCACAAAAATTTGCAT 4157420 >seq1085 Length=315076 Score = 82.4 bits (90), Expect = 7e-11 Identities = 98/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 |||| || ||||| |||||||| ||||| ||||| | |||||| || | || || Sbjct 257924 ACCAAGTGGAGCGTCGATTCCTTCTGGATGTTGTAGTCAGCGAGGGTTCGGCCATCCTCA 257983 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 |||||||| | ||||| | || ||||||||||||| || | || |||||| ||| | Sbjct 257984 AGCTGCTTCTCAGCGAAGCTGAGCCGCTGTTGGTCCGGCGGGATGCCCTCCTTATCCTGG 258043 Query 41774 ATTTTTTGCTTCA 41786 ||||| ||||| Sbjct 258044 ATTTTGGCCTTCA 258056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462203419986000