Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12-
03] 2,182 sequences; 508,550,595 total letters
Query= NC_001962.1
Length=128413
Score E
Sequences producing significant alignments: (Bits) Value
seq15 93.3 3e-14
seq615 84.2 2e-11
>seq15
Length=1624393
Score = 93.3 bits (102), Expect = 3e-14
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187
||||| || ||| | || ||||| || || |||||||| || ||||| |||||||||
Sbjct 1075650 GATAAGGAGGGTATTCCTCCGGATCAGCAGAGGCTTATCTTCGCCGGCAAGCAATTGGAA 1075591
Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTTA 25247
||| | ||| |||| ||||||||||| || |||||||| |||||||| | || |
Sbjct 1075590 GATGGCCGAACCTTGGCGGATTACAATATCCAGAAGGAATCGACTCTTCATCTTGTCCTC 1075531
Query 25248 CGATTACGAGGAGG 25261
|| | ||||||||
Sbjct 1075530 CGTCTCCGAGGAGG 1075517
>seq615
Length=266788
Score = 84.2 bits (92), Expect = 2e-11
Identities = 90/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187
||||||||||| | || |||||||| ||| | || ||||| || || |||||||||
Sbjct 187880 GATAAAGAAGGCATCCCTCCTGATCAACAGAGATTGATTTTTGCTGGTAAGCAATTGGAA 187821
Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTT 25246
||| | |||| | || ||||| || || |||||||| || || |||||| |||| ||
Sbjct 187820 GATGGCCGAACTCTTGCAGATTATAACATCCAAAAGGAGTCAACACTTCACCTGGTTTT 187762
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 410785875629348
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |