Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq15 93.3 3e-14 seq615 84.2 2e-11 >seq15 Length=1624393 Score = 93.3 bits (102), Expect = 3e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187 ||||| || ||| | || ||||| || || |||||||| || ||||| ||||||||| Sbjct 1075650 GATAAGGAGGGTATTCCTCCGGATCAGCAGAGGCTTATCTTCGCCGGCAAGCAATTGGAA 1075591 Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTTA 25247 ||| | ||| |||| ||||||||||| || |||||||| |||||||| | || | Sbjct 1075590 GATGGCCGAACCTTGGCGGATTACAATATCCAGAAGGAATCGACTCTTCATCTTGTCCTC 1075531 Query 25248 CGATTACGAGGAGG 25261 || | |||||||| Sbjct 1075530 CGTCTCCGAGGAGG 1075517 >seq615 Length=266788 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187 ||||||||||| | || |||||||| ||| | || ||||| || || ||||||||| Sbjct 187880 GATAAAGAAGGCATCCCTCCTGATCAACAGAGATTGATTTTTGCTGGTAAGCAATTGGAA 187821 Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTT 25246 ||| | |||| | || ||||| || || |||||||| || || |||||| |||| || Sbjct 187820 GATGGCCGAACTCTTGCAGATTATAACATCCAAAAGGAGTCAACACTTCACCTGGTTTT 187762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410785875629348