Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq139 118 1e-21 seq1309 116 4e-21 seq15 113 5e-20 seq100 111 2e-19 seq580 109 6e-19 seq54 109 6e-19 seq1 109 6e-19 seq281 107 2e-18 seq687 104 3e-17 seq59 104 3e-17 seq146 98.7 1e-15 seq215 93.3 5e-14 seq819 87.8 2e-12 seq1117 82.4 9e-11 >seq139 Length=803459 Score = 118 bits (130), Expect = 1e-21 Identities = 143/195 (73%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053 |||| || || ||||| |||||||| || || |||| || |||||||| || ||||| | Sbjct 751893 CCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGA 751952 Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113 |||| ||||||||||| | ||| | || |||||||||| ||| || |||| | Sbjct 751953 TGAGGCGCTGCTGGTCCGGCGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGT 752012 Query 43114 CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAA 43173 | | |||||||| || || |||| |||||||| || || ||||| || || || | Sbjct 752013 CGATGGTGTCGCTGCTCTCGACCTCGAGAGTGATGGTCTTCCCGGTTAGGGTTTTCACGA 752072 Query 43174 AGATTTGCATTTTTA 43188 | || ||||| |||| Sbjct 752073 AAATCTGCATCTTTA 752087 >seq1309 Length=78448 Score = 116 bits (128), Expect = 4e-21 Identities = 144/196 (73%), Gaps = 1/196 (1%) Strand=Plus/Plus Query 42994 CCTTT-TGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || ||||| |||||||| || || |||| || |||||||| || ||||| Sbjct 62322 CCTTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCGTCTTCGAGCTGCTTGCCGGCGAAG 62381 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 ||||| ||||||||||| | ||| | || |||||||||| ||| || |||| | Sbjct 62382 ATGAGGCGCTGCTGGTCCGGCGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTG 62441 Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | |||||||| || || |||| |||||||| || || ||||| || || || Sbjct 62442 TCAATGGTGTCGCTGCTCTCGACCTCGAGGGTGATGGTCTTCCCGGTTAGGGTTTTCACG 62501 Query 43173 AAGATTTGCATTTTTA 43188 || || ||||| |||| Sbjct 62502 AAAATCTGCATCTTTA 62517 >seq15 Length=1624393 Score = 113 bits (124), Expect = 5e-20 Identities = 166/231 (72%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| || || || | ||||| ||| | || ||||| || ||||||||||| || Sbjct 1075745 CCTCCCCTCAACCGAAGCACCAGATGGAGCGTCGATTCCTTCTGGATATTGTAATCCGCG 1075804 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || ||||| |||| || |||||||| || ||||| || | ||||||||||||| || Sbjct 1075805 AGGGTCCGGCCGTCCTCGAGCTGCTTTCCGGCGAAAATCAACCGCTGCTGGTCGGGAGGA 1075864 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGA---TTC 43132 | || |||||||||| ||| || |||| ||| | | | ||| || ||| || Sbjct 1075865 ATGCCCTCCTTGTCCTGGATCTTAGCCTTGA-CGTTGTCGATCGTATC---CGAACTCTC 1075920 Query 43133 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || |||| |||||||| ||||| || || || || || ||||| ||||| Sbjct 1075921 GACCTCGAGAGTGATGGTCTTGCCGGTCAGGGTTTTCACGAAGATCTGCAT 1075971 Score = 107 bits (118), Expect = 2e-18 Identities = 141/194 (73%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || ||||||||||| || || ||||| | || || |||||||| || ||||| Sbjct 1058106 TCCTTCTGGATATTGTAATCGGCAAGGGTCCGGCCATCCTCGAGCTGCTTCCCGGCGAAG 1058165 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || || |||||||| |||| || | || |||||||||| ||| || || | | Sbjct 1058166 ATAAGCCGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGGATCTTAGCCTTCACGTTA 1058225 Query 43113 GCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 43169 | | |||||| |||| || || |||| |||||||| ||||| ||||| || || Sbjct 1058226 TCGATCGTGTCGGAGCTC---TCGACCTCGAGAGTGATGGTCTTGCCGGTTAGGGTTTTC 1058282 Query 43170 ACAAAGATTTGCAT 43183 || ||||| ||||| Sbjct 1058283 ACGAAGATCTGCAT 1058296 Score = 91.5 bits (100), Expect = 2e-13 Identities = 159/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||| | ||||| ||||| ||||| || ||||||||| || |||||||| ||| Sbjct 1075061 CCACCTCTCAGACGCAGGACCAAGTGCAAAGTAGACTCCTTTTGGATGTTGTAATCCGCC 1075120 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | |||| |||| || | |||||||||||||| || | || ||||| ||| | || Sbjct 1075121 AATGTCCTTCCGTCCTCCAATTGCTTACCAGCGAAAATCAATCTCTGCTAGTCTGGTGGG 1075180 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 43133 | | |||||| ||| ||| || || | | | | || || |||| || Sbjct 1075181 ATTCCCTCCTTATCCTGGATCTTGGCCTTCACATTATCGATGGTATCAGAGCTC---TCG 1075237 Query 43134 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || |||| || || || || |||||||| || || ||||| || ||||| Sbjct 1075238 ACCTCGAGAGTAATTGTCTTCCCCGTTAGGGTTTTGACAAAAATCTGCAT 1075287 >seq100 Length=933141 Score = 111 bits (122), Expect = 2e-19 Identities = 153/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 ||||| |||| || |||||| || || ||||| ||||| || ||||| |||| || Sbjct 405020 CACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCGGCCGTCCTC 404961 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 |||||||| || ||||| ||||| ||||||||||| | ||| | || |||||||||| Sbjct 404960 CAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTG 404901 Query 43094 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153 ||| || || | | | | |||||| || || || || | || || || || Sbjct 404900 GATCTTGGCCTTCACATTGTCGATGGTGTCGGAAGACTCAACCTCTAGGGTTATCGTCTT 404841 Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCATTTTT 43187 |||||||| || || || ||||| ||||| ||| Sbjct 404840 CCCCGTTAGGGTTTTCACGAAGATCTGCATCTTT 404807 >seq580 Length=281551 Score = 109 bits (120), Expect = 6e-19 Identities = 156/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | |||||| || | || ||||||||| || ||||| || || || || || | Sbjct 199610 ACGGAGCACCAAGTGGAGGGTTGACTCCTTTTGGATGTTGTAGTCTGCAAGGGTTCGGCC 199551 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || |||||||| |||||||| || || ||||||||||| | || | | ||||| Sbjct 199550 ATCTTCGAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGGATCCCTTCCTT 199491 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146 |||| ||| || |||| ||| | | | ||||| || ||||| |||| |||| Sbjct 199490 GTCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCAGATGACTCCACCTCGAGGGTGA 199432 Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| ||||| || || || || || ||||||||||| Sbjct 199431 TGGTCTTGCCGGTAAGAGTTTTCACGAAGATTTGCAT 199395 Score = 107 bits (118), Expect = 2e-18 Identities = 156/218 (72%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | |||||| || | || ||| || || || |||||||| || || || || | Sbjct 199838 ACGGAGCACCAAGTGGAGGGTTGACTCTTTCTGGATGTTGTAATCCGCAAGGGTACGGCC 199779 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || |||||||| |||||||| || || ||||||||||| | || | | ||||| Sbjct 199778 ATCTTCGAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCTGGGGGAATCCCTTCCTT 199719 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146 ||| ||| || |||| ||| | | | ||||| || ||||| |||| |||| Sbjct 199718 GTCTTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCAGATGACTCCACCTCGAGGGTGA 199660 Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 |||| ||||| || || ||||| |||||||| |||||| Sbjct 199659 TGGTCTTGCCGGTGAGGGTCTTAACAAAGATCTGCATT 199622 Score = 98.7 bits (108), Expect = 1e-15 Identities = 156/220 (71%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 |||||| |||||||| | ||| |||||| || || ||||| || || || || || | Sbjct 200294 ACGCAAAACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCC 200235 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| || |||||||| ||||| || || || | ||||||||| | || | || |||||| Sbjct 200234 GTCCTCAAGCTGCTTTCCAGCAAAGATAAGCCTCTGCTGGTCTGGTGGGATGCCCTCCTT 200175 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCG-TGTCG---CTCGATTCCACATCGACCG 43143 || ||| | || | | ||| | || | ||||| ||| || || || | | Sbjct 200174 ATCT-TGAATCTTAGCCTTCACGTTGTCAATGGTGTCGGAGCTC---TCGACCTCAAGGG 200119 Query 43144 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||||| || || || || ||||| || ||||||||||| Sbjct 200118 TGATGGTCTTCCCGGTAAGGGTCTTGACGAAGATTTGCAT 200079 Score = 91.5 bits (100), Expect = 2e-13 Identities = 138/195 (71%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||| |||||||||||||| |||| | || || | |||||| |||||||| Sbjct 200726 CTCCTTCTGAATGTTGTAATCAGCCAGGGTCCTTCCATCCTCCAACTGCTTTCCAGCGAA 200667 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || | | ||||||||| | || | || ||||||||| ||| ||| || | | Sbjct 200666 AATCAACCTCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATT 200607 Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | ||||| |||| ||||| || | |||||||| || || || | ||||| Sbjct 200606 GTCGATGGTGTCAGAGCTC---TCCACCTCCAAGGTGATGGTCTTTCCTGTCAAGGTCTT 200550 Query 43169 TACAAAGATTTGCAT 43183 || ||||| ||||| Sbjct 200549 CACGAAGATCTGCAT 200535 >seq54 Length=1192742 Score = 109 bits (120), Expect = 6e-19 Identities = 156/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | |||||| || | || ||||||||| || ||||| || || || || || | Sbjct 263261 ACGGAGCACCAAGTGGAGGGTTGACTCCTTTTGGATGTTGTAGTCTGCAAGGGTTCGGCC 263202 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || |||||||| |||||||| || || ||||||||||| | || | | ||||| Sbjct 263201 ATCTTCGAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGGATCCCTTCCTT 263142 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146 |||| ||| || |||| ||| | | | ||||| || ||||| |||| |||| Sbjct 263141 GTCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCAGATGACTCCACCTCGAGGGTGA 263083 Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| ||||| || || || || || ||||||||||| Sbjct 263082 TGGTCTTGCCGGTAAGAGTTTTCACGAAGATTTGCAT 263046 Score = 107 bits (118), Expect = 2e-18 Identities = 156/218 (72%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | |||||| || | || ||| || || || |||||||| || || || || | Sbjct 263489 ACGGAGCACCAAGTGGAGGGTTGACTCTTTCTGGATGTTGTAATCCGCAAGGGTACGGCC 263430 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || |||||||| |||||||| || || ||||||||||| | || | | ||||| Sbjct 263429 ATCTTCGAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCTGGGGGAATCCCTTCCTT 263370 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146 ||| ||| || |||| ||| | | | ||||| || ||||| |||| |||| Sbjct 263369 GTCTTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCAGATGACTCCACCTCGAGGGTGA 263311 Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 |||| ||||| || || ||||| |||||||| |||||| Sbjct 263310 TGGTCTTGCCGGTGAGGGTCTTAACAAAGATCTGCATT 263273 Score = 98.7 bits (108), Expect = 1e-15 Identities = 156/220 (71%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 |||||| |||||||| | ||| |||||| || || ||||| || || || || || | Sbjct 263945 ACGCAAAACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCC 263886 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| || |||||||| ||||| || || || | ||||||||| | || | || |||||| Sbjct 263885 GTCCTCAAGCTGCTTTCCAGCAAAGATAAGCCTCTGCTGGTCTGGTGGGATGCCCTCCTT 263826 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCG-TGTCG---CTCGATTCCACATCGACCG 43143 || ||| | || | | ||| | || | ||||| ||| || || || | | Sbjct 263825 ATCT-TGAATCTTAGCCTTCACGTTGTCAATGGTGTCGGAGCTC---TCGACCTCAAGGG 263770 Query 43144 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||||| || || || || ||||| || ||||||||||| Sbjct 263769 TGATGGTCTTCCCGGTAAGGGTCTTGACGAAGATTTGCAT 263730 Score = 91.5 bits (100), Expect = 2e-13 Identities = 138/195 (71%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||| |||||||||||||| |||| | || || | |||||| |||||||| Sbjct 264377 CTCCTTCTGAATGTTGTAATCAGCCAGGGTCCTTCCATCCTCCAACTGCTTTCCAGCGAA 264318 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || | | ||||||||| | || | || ||||||||| ||| ||| || | | Sbjct 264317 AATCAACCTCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATT 264258 Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | ||||| |||| ||||| || | |||||||| || || || | ||||| Sbjct 264257 GTCGATGGTGTCAGAGCTC---TCCACCTCCAAGGTGATGGTCTTTCCTGTCAAGGTCTT 264201 Query 43169 TACAAAGATTTGCAT 43183 || ||||| ||||| Sbjct 264200 CACGAAGATCTGCAT 264186 >seq1 Length=4167794 Score = 109 bits (120), Expect = 6e-19 Identities = 156/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | |||||| || | || |||||| || || |||||||| || || || || | Sbjct 1162844 ACGGAGCACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAATCTGCGAGGGTTCGGCC 1162903 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| || |||||||| || ||||| || || ||||||||||| | || | | ||||| Sbjct 1162904 GTCTTCGAGCTGCTTTCCGGCGAAGATAAGACGCTGCTGGTCTGGGGGGATCCCTTCCTT 1162963 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146 |||| ||| || ||||| ||| | | | |||||| || || || |||| |||| Sbjct 1162964 GTCCTGGATCTTGGCTTTGA-CGTTGTCGATGGTGTCGGAAGACTCGACCTCGAGGGTGA 1163022 Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| || || || || || || || ||||||||||| Sbjct 1163023 TGGTCTTTCCAGTAAGGGTTTTCACGAAGATTTGCAT 1163059 Score = 93.3 bits (102), Expect = 5e-14 Identities = 155/220 (70%), Gaps = 8/220 (4%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | ||||||||| | ||| ||| || || || ||||| || || || || || | Sbjct 1162388 ACGAAGCACCAAATGAAGAGTGGACTCTTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCC 1162447 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| || |||||||| || || || || || | ||||||||| | || | || |||||| Sbjct 1162448 GTCCTCGAGCTGCTTTCCTGCAAAGATAAGCCTCTGCTGGTCCGGTGGGATGCCCTCCTT 1162507 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCC-ACCGTGTCG---CTCGATTCCACATCGACCG 43143 ||| ||| | || | | ||| | | | |||||| ||| ||||| || | | Sbjct 1162508 GTCT-TGAATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTC---TCCACCTCAAGGG 1162563 Query 43144 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||||| || || || || ||||| || ||||||||||| Sbjct 1162564 TGATGGTCTTCCCTGTAAGGGTCTTGACGAAGATTTGCAT 1162603 Score = 93.3 bits (102), Expect = 5e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || |||| | || ||||||||||| || || || Sbjct 1162640 CTCCTTCTGGATGTTGTAGTCGGCAAGGGTCCTGCCATCCTCTAGCTGCTTTCCGGCAAA 1162699 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || | || ||||||||| | || | || |||||||||| ||| || |||| ||| Sbjct 1162700 GATCAATCTCTGCTGGTCTGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 1162758 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | |||||| ||| || || | ||||| || ||||| || || ||||| | Sbjct 1162759 TGTCGATGGTGTCGGAGCTTTCGACCTCCAGGGTGATAGTCTTGCCGGTGAGGGTCTTGA 1162818 Query 43171 CAAAGATTTGCAT 43183 ||||||| ||||| Sbjct 1162819 CAAAGATCTGCAT 1162831 Score = 91.5 bits (100), Expect = 2e-13 Identities = 138/195 (71%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||| || ||||||||||| |||| | || || | ||||||||||||||| Sbjct 1161956 CTCCTTCTGAATGTTATAATCAGCCAGGGTCCTTCCATCCTCCAACTGCTTACCAGCGAA 1162015 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || | | ||||||||| | || | | |||||||||| ||| || || | | Sbjct 1162016 GATCAACCTCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTTAGCCTTCACATT 1162075 Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | ||||| |||| ||||| || | |||||||| || || || | ||||| Sbjct 1162076 GTCGATGGTGTCCGAGCTC---TCCACCTCCAAGGTGATGGTCTTCCCTGTCAAGGTCTT 1162132 Query 43169 TACAAAGATTTGCAT 43183 |||||||| ||||| Sbjct 1162133 CACAAAGATCTGCAT 1162147 >seq281 Length=531459 Score = 107 bits (118), Expect = 2e-18 Identities = 152/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 ||||| |||| || |||||| || || ||||| || || || ||||| |||| || Sbjct 453586 CACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTCCGGCCGTCCTC 453527 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 |||||||| || ||||| ||||||||||||||||| | ||| | || |||||||||| Sbjct 453526 CAGCTGCTTGCCGGCGAAGATGAGTCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTG 453467 Query 43094 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153 ||| || || | | | | ||||| || || || || | || || || || Sbjct 453466 GATCTTGGCCTTCACATTGTCGATGGTGTCTGAAGACTCAACCTCCAGAGTTATCGTCTT 453407 Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCATTTTT 43187 |||||||| || || || ||||| ||||| ||| Sbjct 453406 CCCCGTTAGGGTTTTCACGAAGATCTGCATCTTT 453373 >seq687 Length=229775 Score = 104 bits (114), Expect = 3e-17 Identities = 140/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||||||||| || |||||||| || || || | || || ||||||||||||||||| Sbjct 53534 TCCTTTTGAATGTTATAATCAGCAAGCGTGCGACCATCTTCAAGCTGCTTACCAGCGAAG 53475 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 ||||| | ||||||||| | || | || |||||| ||| ||| ||| || | | Sbjct 53474 ATGAGCCTCTGCTGGTCCGGGGGAATGCCCTCCTTATCCTGGATCTTTGCCTTAACATTA 53415 Query 43113 GCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 43169 | | || || ||| ||| || || | ||||| || || || || || ||||| Sbjct 53414 TCAATGGTATCCGAGCT---TTCAACTTCCAAGGTGATTGTCTTACCGGTAAGGGTCTTG 53358 Query 43170 ACAAAGATTTGCAT 43183 |||||||||||||| Sbjct 53357 ACAAAGATTTGCAT 53344 Score = 93.3 bits (102), Expect = 5e-14 Identities = 86/109 (79%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||||||||| || |||||||| || || |||| | |||| || ||||||||||| || || Sbjct 53991 CTCCTTTTGGATGTTGTAATCCGCAAGGGTCCTCCCGTCCTCCAGCTGCTTACCGGCAAA 53932 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTT 43100 ||||| | ||||||||| | || | || |||||||||| ||| ||| Sbjct 53931 GATGAGCCTCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTT 53883 Score = 91.5 bits (100), Expect = 2e-13 Identities = 138/195 (71%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| ||||| || || || |||| || |||||||| ||||| || Sbjct 53307 CTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCAAA 53248 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || | ||||||||| | || | | ||| ||||| ||| || |||| | Sbjct 53247 GATCAGCCTCTGCTGGTCTGGTGGGATACCCTCTTTGTCTTGGATCTTGGCCTTGACATT 53188 Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | |||||| |||| || || || | ||||||||||| || || || ||||| Sbjct 53187 ATCAATCGTGTCAGAGCTC---TCAACCTCCAAAGTGATGGTTTTTCCGGTGAGGGTCTT 53131 Query 43169 TACAAAGATTTGCAT 43183 ||||| |||||||| Sbjct 53130 AACAAATATTTGCAT 53116 >seq59 Length=1152742 Score = 104 bits (114), Expect = 3e-17 Identities = 140/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||||||||| || |||||||| || || || | || || ||||||||||||||||| Sbjct 731015 TCCTTTTGAATGTTATAATCAGCAAGCGTGCGACCATCTTCAAGCTGCTTACCAGCGAAG 730956 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 ||||| | ||||||||| | || | || |||||| ||| ||| ||| || | | Sbjct 730955 ATGAGCCTCTGCTGGTCCGGGGGAATGCCCTCCTTATCCTGGATCTTTGCCTTAACATTA 730896 Query 43113 GCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 43169 | | || || ||| ||| || || | ||||| || || || || || ||||| Sbjct 730895 TCAATGGTATCCGAGCT---TTCAACTTCCAAGGTGATTGTCTTACCGGTAAGGGTCTTG 730839 Query 43170 ACAAAGATTTGCAT 43183 |||||||||||||| Sbjct 730838 ACAAAGATTTGCAT 730825 Score = 93.3 bits (102), Expect = 5e-14 Identities = 86/109 (79%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||||||||| || |||||||| || || |||| | |||| || ||||||||||| || || Sbjct 731472 CTCCTTTTGGATGTTGTAATCCGCAAGGGTCCTCCCGTCCTCCAGCTGCTTACCGGCAAA 731413 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTT 43100 ||||| | ||||||||| | || | || |||||||||| ||| ||| Sbjct 731412 GATGAGCCTCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTT 731364 Score = 91.5 bits (100), Expect = 2e-13 Identities = 138/195 (71%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| ||||| || || || |||| || |||||||| ||||| || Sbjct 730788 CTCCTTCTGGATGTTGTAGTCAGCGAGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCAAA 730729 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || | ||||||||| | || | | ||| ||||| ||| || |||| | Sbjct 730728 GATCAGCCTCTGCTGGTCTGGTGGGATACCCTCTTTGTCTTGGATCTTGGCCTTGACATT 730669 Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | |||||| |||| || || || | ||||||||||| || || || ||||| Sbjct 730668 ATCAATCGTGTCAGAGCTC---TCAACCTCCAAAGTGATGGTTTTTCCGGTGAGGGTCTT 730612 Query 43169 TACAAAGATTTGCAT 43183 ||||| |||||||| Sbjct 730611 AACAAATATTTGCAT 730597 Score = 91.5 bits (100), Expect = 2e-13 Identities = 138/195 (71%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| ||||| || |||| | || || ||||||||||| || || Sbjct 892946 CTCCTTCTGGATGTTGTAGTCAGCGAGGGTCCTTCCATCCTCGAGCTGCTTACCTGCAAA 893005 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || | | ||||||||| | || | || |||||||||| |||||| |||| | Sbjct 893006 GATCAACCTCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATTTTAGCCTTGACATT 893065 Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | ||||| |||| ||||| || | || ||||| || || || || ||||| Sbjct 893066 GTCAATAGTGTCGGAGCTC---TCCACTTCCAAAGTAATGGTCTTCCCGGTAAGGGTCTT 893122 Query 43169 TACAAAGATTTGCAT 43183 || ||||||||||| Sbjct 893123 GACGAAGATTTGCAT 893137 >seq146 Length=786261 Score = 98.7 bits (108), Expect = 1e-15 Identities = 150/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 ||||| |||| || |||||| || || ||||| || || || || || |||| || Sbjct 97616 CACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTC 97557 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 |||||||| || ||||| ||||| ||||||||||| | || | || |||||||||| Sbjct 97556 CAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTG 97497 Query 43094 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153 ||| || || | | | | |||||| || || || || | || || || || Sbjct 97496 GATCTTGGCCTTCACATTGTCGATGGTGTCGGAAGACTCAACCTCTAGGGTTATCGTCTT 97437 Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCATTTTT 43187 |||||||| || || || ||||| ||||| ||| Sbjct 97436 CCCCGTTAGGGTTTTCACGAAGATCTGCATCTTT 97403 >seq215 Length=606900 Score = 93.3 bits (102), Expect = 5e-14 Identities = 136/191 (71%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 42994 CCTTT-TGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || ||||| ||||| || || || |||| || |||||||| || ||||| Sbjct 55605 CCTTTCTGGATGTTGTAGTCAGCTAGGGTTCGGCCGTCTTCGAGCTGCTTGCCGGCGAAG 55664 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 || || ||||||||||| | || | || |||||||||| ||| || |||| | Sbjct 55665 ATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTG 55724 Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | |||||||| || || || | |||||||| || || ||||| || || || Sbjct 55725 TCGATAGTGTCGCTGCTCTCGACCTCAAGAGTGATGGTCTTCCCGGTTAGGGTTTTCACG 55784 Query 43173 AAGATTTGCAT 43183 || || ||||| Sbjct 55785 AAAATCTGCAT 55795 >seq819 Length=180711 Score = 87.8 bits (96), Expect = 2e-12 Identities = 137/195 (70%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || |||| | || || ||||||||||| || || Sbjct 10379 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTCCTTCCATCCTCGAGCTGCTTACCTGCAAA 10320 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || | | ||||||||| | || | || |||||||||| |||||| |||| | Sbjct 10319 GATCAACCTCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATTTTAGCCTTGACATT 10260 Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | ||||| |||| ||||| || | || ||||| || || || || ||||| Sbjct 10259 GTCAATAGTGTCGGAGCTC---TCCACTTCCAAAGTAATGGTCTTCCCGGTAAGGGTCTT 10203 Query 43169 TACAAAGATTTGCAT 43183 || ||||||||||| Sbjct 10202 GACGAAGATTTGCAT 10188 Score = 87.8 bits (96), Expect = 2e-12 Identities = 137/195 (70%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || |||| | || || ||||||||||| || || Sbjct 177875 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTCCTTCCATCCTCGAGCTGCTTACCTGCAAA 177934 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || | | ||||||||| | || | || |||||||||| |||||| |||| | Sbjct 177935 GATCAACCTCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATTTTAGCCTTGACATT 177994 Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | ||||| |||| ||||| || | || ||||| || || || || ||||| Sbjct 177995 GTCAATAGTGTCGGAGCTC---TCCACTTCCAAAGTAATGGTCTTCCCGGTAAGGGTCTT 178051 Query 43169 TACAAAGATTTGCAT 43183 || ||||||||||| Sbjct 178052 GACGAAGATTTGCAT 178066 >seq1117 Length=108528 Score = 82.4 bits (90), Expect = 9e-11 Identities = 51/55 (93%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 60077 GGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTAC 60131 |||||||||||| |||| ||||||||||||||||| ||||| ||||||||||||| Sbjct 98069 GGAATCGAACCCGGGTCACCCGCGTGACAGGCGGAAATACTTACCACTATACTAC 98015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571802003674960