Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12-
03] 2,182 sequences; 508,550,595 total letters
Query= NC_002520.1
Length=232392
Score E
Sequences producing significant alignments: (Bits) Value
seq615 109 8e-19
seq15 93.3 6e-14
>seq615
Length=266788
Score = 109 bits (120), Expect = 8e-19
Identities = 108/140 (77%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 146048 GTTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCT 146107
||||| || || || || || |||| || | || || || || || |||||||||
Sbjct 187744 GTTCCTCCCCTCAGCCTCAAAACCAGGTGAAGTGTTGACTCCTTTTGGATGTTATAATCT 187803
Query 146108 GAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGA 146167
| |||||||| || ||| || ||||| || ||||||||||||||||| || ||||| |||
Sbjct 187804 GCAAGAGTTCGGCCATCTTCCAATTGCTTACCAGCAAAAATCAATCTCTGTTGATCAGGA 187863
Query 146168 GGAATTCCTTCTTTATCTTG 146187
|| || ||||||||||| ||
Sbjct 187864 GGGATGCCTTCTTTATCCTG 187883
>seq15
Length=1624393
Score = 93.3 bits (102), Expect = 6e-14
Identities = 104/138 (75%), Gaps = 1/138 (1%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
||||| || |||| | ||||| || ||||| || || || || || ||||| | |
Sbjct 1057613 CCACCCCTCAGTCGAAGAACCAAGTGCAAAGTTGACTCCTTTTGGATGTTGTAATCCGCA 1057672
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATC-CGGAGG 146169
||||| |||| ||| || ||||| || ||||||||||| ||||| ||||| || || ||
Sbjct 1057673 AGAGTCCTGCCATCCTCCAATTGCTTACCAGCAAAAATTAATCTCTGCTGGTCTGGGGGG 1057732
Query 146170 AATTCCTTCTTTATCTTG 146187
||||| || ||||||||
Sbjct 1057733 GATTCCCTCCTTATCTTG 1057750
Score = 86.0 bits (94), Expect = 9e-12
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|| ||||| | || | ||||| || | || || ||||| ||||||||||| |
Sbjct 1075289 CCTCCTCTTAATCGCAGAACCAAGTGGAGGGTCGACTCTTTCTGAATATTATAATCGGCT 1075348
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|| |||| || ||| || || || ||||| ||||| |||| || ||||| ||||| |||
Sbjct 1075349 AGGGTTCGGCCATCCTCCAACTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCCGGGGGA 1075408
Query 146171 ATTCCTTCTTTATCTTG 146187
||||| || ||||||||
Sbjct 1075409 ATTCCCTCCTTATCTTG 1075425
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 743506120317440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |