Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq129 89.7 5e-13 seq22 89.7 5e-13 >seq129 Length=826992 Score = 89.7 bits (98), Expect = 5e-13 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 14204 CACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAAT 14263 || ||||||||||| ||||| |||||||||||| ||||| |||||||| ||||| || Sbjct 115567 CAAGCAAAATCACAGTGAAGACCCTCATCTCTAGATATAAGCTCGTTTGAGAATGTCAAC 115508 Query 14264 CCTGGCATCAATCCTCGtttttttAACCAAAATATTGCA 14302 || ||||| | ||| | ||||| | ||| ||||| ||| Sbjct 115507 CCAGGCATTAGTCCCCTCTTTTTAAGCCAGAATATGGCA 115469 >seq22 Length=1467039 Score = 89.7 bits (98), Expect = 5e-13 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 14204 CACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAAT 14263 || ||||||||||| ||||| |||||||||||| ||||| |||||||| ||||| || Sbjct 15043 CAAGCAAAATCACAGTGAAGACCCTCATCTCTAGATATAAGCTCGTTTGAGAATGTCAAC 15102 Query 14264 CCTGGCATCAATCCTCGtttttttAACCAAAATATTGCA 14302 || ||||| | ||| | ||||| | ||| ||||| ||| Sbjct 15103 CCAGGCATTAGTCCCCTCTTTTTAAGCCAGAATATGGCA 15141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482332444023760