Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12-
03] 2,182 sequences; 508,550,595 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq1330 205 1e-47
seq801 205 1e-47
seq202 205 1e-47
>seq1330
Length=73179
Score = 205 bits (226), Expect = 1e-47
Identities = 593/885 (67%), Gaps = 37/885 (4%)
Strand=Plus/Plus
Query 124996 TGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTT 125055
||||||| ||| ||| | || || |||||||||||||| ||||| |||| ||||| |
Sbjct 26189 TGTTTCCGATCCAGTACCCGGAAATATGGGAAATGTACAAGAAGGCCGAGGCATCCTTCT 26248
Query 125056 GGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTG 125115
|||| | ||| |||||||| || | | ||||| | | | ||||| | | | | |
Sbjct 26249 GGACCGCCGAGGAGGTCGACCTATGCCAGGACATCCGCCACTGGGAAGCCCTAT---CCG 26305
Query 125116 AAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCG 125175
| ||| | | || | ||||||||| | |||||||| || | ||||||||| ||||
Sbjct 26306 ACGGCGAGAGGCACTTCGTCTCGCACATTCTCGCCTTCTTCGCTGCCTCCGATGGCATCG 26365
Query 125176 TCAACGACAATCT-GTTGACACGATTCTCTCAAGAGTTGACCAT-TC-CAGAGGTGTCGT 125232
|| || ||||| | || | | || | | ||| | ||| || | |||| ||
Sbjct 26366 TCCTTGAAAATCTCGCTGGGAGGTTTATGA-AGGAGGT--CCAGGTCGCCGAGGCC-CGC 26421
Query 125233 GCTTT-TACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTG 125291
|| || ||||| ||||| ||| ||||||||| | ||||| || |||||| ||
Sbjct 26422 GCCTTCTACGGGTTCCAGATCGCCATTGAGAACATCCACTCCGAGATGTACAGCCTCCTT 26481
Query 125292 ATTGACATGTACATTCGCGA-TCCGCAACGTAAA-CACATGCTCTTTAACGCAATCGACA 125349
| || | |||||| || |||| ||| || ||| ||||| |||| |||||||
Sbjct 26482 CTCGAGACGTACATCAAGGACTCCG--ACGAGAAGCACCGCCTCTTCCACGCGATCGACA 26539
Query 125350 CGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGT 125409
| | || | | || ||||| || |||| | | |||||||| | | | |||
Sbjct 26540 CCATCCCCTGCGTCGCGAAGAAGGCCCAGTGGGCCCTGAGATGGATCGACGGCTCCGAGT 26599
Query 125410 CTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTA 125469
||| ||| || || | ||||| || ||| ||| ||||| || ||||| ||||| |
Sbjct 26600 CTTT---CGCGGAGCGAATCGTGGCCTTTGCCTGCGTGGAGGGGATTTTCTTCTCGGGGA 26656
Query 125470 GTTT-TGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGT 125528
|||| |||| | || |||||||| || |||||||| | ||||| |||||||| |
Sbjct 26657 GTTTCTGCG-CGATATTTTGGCTTAAAAAGCGCGGTTTAATGCCGGGACTGACTTTCTCC 26715
Query 125529 AACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGT-TTCG 125587
|||||| | || || |||||||||||| | ||||| ||||| || | | |||| |||
Sbjct 26716 AACGAGCTGATCTCGCGAGACGAGGGCTTGCACTGCGACTTCGCGTGTTTGCTGTATTC- 26774
Query 125588 CAACTATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGA 125647
||| ||| | || | || | |||||| || ||| | || ||| |
Sbjct 26775 --ACT-GCTGAG----GA-AGAAGCT-CAGCGAGGATCGGGTTAAGTCGATCGTACGGAA 26825
Query 125648 TGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCG-GTCAGCATGATTGGCA 125706
|| ||| ||| || ||||| | ||| | || ||| || || || | || |
Sbjct 26826 CGCGGTGGAGATCGAGAGGGAGTTCGTGTGCGACGCGCTGCCGTGTGCGC-TGGTGGGGA 26884
Query 125707 TGAACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGT 125766
||||| || | || ||| || |||||| ||||| ||||| ||||| || ||| | ||
Sbjct 26885 TGAACGGCGATCTGATGGGCACGTACATCGAGTTCGTGGCGGATCGGCTGCTGGGCTCGT 26944
Query 125767 TGATTGGCCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCA- 125825
|| | |||||| ||||| | | |||| || || |||| ||| ||| ||||
Sbjct 26945 TGGGATACGACAAGATGTACAATGTCCAGAACCCGTTCGATTGGATG--GAGCTGATCAG 27002
Query 125826 -CTAGAGGGTAAGACCAACTTTTTCGAGAAGAAGGTCAGCGAGTA 125869
|| |||| ||||||||||| || |||||| ||| |||||||
Sbjct 27003 CCTGCAGGGGAAGACCAACTTCTTTGAGAAGCGCGTCGGCGAGTA 27047
Score = 205 bits (226), Expect = 1e-47
Identities = 593/885 (67%), Gaps = 37/885 (4%)
Strand=Plus/Minus
Query 124996 TGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTT 125055
||||||| ||| ||| | || || |||||||||||||| ||||| |||| ||||| |
Sbjct 46991 TGTTTCCGATCCAGTACCCGGAAATATGGGAAATGTACAAGAAGGCCGAGGCATCCTTCT 46932
Query 125056 GGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTG 125115
|||| | ||| |||||||| || | | ||||| | | | ||||| | | | | |
Sbjct 46931 GGACCGCCGAGGAGGTCGACCTATGCCAGGACATCCGCCACTGGGAAGCCCTAT---CCG 46875
Query 125116 AAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCG 125175
| ||| | | || | ||||||||| | |||||||| || | ||||||||| ||||
Sbjct 46874 ACGGCGAGAGGCACTTCGTCTCGCACATTCTCGCCTTCTTCGCTGCCTCCGATGGCATCG 46815
Query 125176 TCAACGACAATCT-GTTGACACGATTCTCTCAAGAGTTGACCAT-TC-CAGAGGTGTCGT 125232
|| || ||||| | || | | || | | ||| | ||| || | |||| ||
Sbjct 46814 TCCTTGAAAATCTCGCTGGGAGGTTTATGA-AGGAGGT--CCAGGTCGCCGAGGCC-CGC 46759
Query 125233 GCTTT-TACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTG 125291
|| || ||||| ||||| ||| ||||||||| | ||||| || |||||| ||
Sbjct 46758 GCCTTCTACGGGTTCCAGATCGCCATTGAGAACATCCACTCCGAGATGTACAGCCTCCTT 46699
Query 125292 ATTGACATGTACATTCGCGA-TCCGCAACGTAAA-CACATGCTCTTTAACGCAATCGACA 125349
| || | |||||| || |||| ||| || ||| ||||| |||| |||||||
Sbjct 46698 CTCGAGACGTACATCAAGGACTCCG--ACGAGAAGCACCGCCTCTTCCACGCGATCGACA 46641
Query 125350 CGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGT 125409
| | || | | || ||||| || |||| | | |||||||| | | | |||
Sbjct 46640 CCATCCCCTGCGTCGCGAAGAAGGCCCAGTGGGCCCTGAGATGGATCGACGGCTCCGAGT 46581
Query 125410 CTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTA 125469
||| ||| || || | ||||| || ||| ||| ||||| || ||||| ||||| |
Sbjct 46580 CTTT---CGCGGAGCGAATCGTGGCCTTTGCCTGCGTGGAGGGGATTTTCTTCTCGGGGA 46524
Query 125470 GTTT-TGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGT 125528
|||| |||| | || |||||||| || |||||||| | ||||| |||||||| |
Sbjct 46523 GTTTCTGCG-CGATATTTTGGCTTAAAAAGCGCGGTTTAATGCCGGGACTGACTTTCTCC 46465
Query 125529 AACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGT-TTCG 125587
|||||| | || || |||||||||||| | ||||| ||||| || | | |||| |||
Sbjct 46464 AACGAGCTGATCTCGCGAGACGAGGGCTTGCACTGCGACTTCGCGTGTTTGCTGTATTC- 46406
Query 125588 CAACTATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGA 125647
||| ||| | || | || | |||||| || ||| | || ||| |
Sbjct 46405 --ACT-GCTGAG----GA-AGAAGCT-CAGCGAGGATCGGGTTAAGTCGATCGTACGGAA 46355
Query 125648 TGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCG-GTCAGCATGATTGGCA 125706
|| ||| ||| || ||||| | ||| | || ||| || || || | || |
Sbjct 46354 CGCGGTGGAGATCGAGAGGGAGTTCGTGTGCGACGCGCTGCCGTGTGCGC-TGGTGGGGA 46296
Query 125707 TGAACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGT 125766
||||| || | || ||| || |||||| ||||| ||||| ||||| || ||| | ||
Sbjct 46295 TGAACGGCGATCTGATGGGCACGTACATCGAGTTCGTGGCGGATCGGCTGCTGGGCTCGT 46236
Query 125767 TGATTGGCCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCA- 125825
|| | |||||| ||||| | | |||| || || |||| ||| ||| ||||
Sbjct 46235 TGGGATACGACAAGATGTACAATGTCCAGAACCCGTTCGATTGGATG--GAGCTGATCAG 46178
Query 125826 -CTAGAGGGTAAGACCAACTTTTTCGAGAAGAAGGTCAGCGAGTA 125869
|| |||| ||||||||||| || |||||| ||| |||||||
Sbjct 46177 CCTGCAGGGGAAGACCAACTTCTTTGAGAAGCGCGTCGGCGAGTA 46133
>seq801
Length=188201
Score = 205 bits (226), Expect = 1e-47
Identities = 593/885 (67%), Gaps = 37/885 (4%)
Strand=Plus/Plus
Query 124996 TGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTT 125055
||||||| ||| ||| | || || |||||||||||||| ||||| |||| ||||| |
Sbjct 11190 TGTTTCCGATCCAGTACCCGGAAATATGGGAAATGTACAAGAAGGCCGAGGCATCCTTCT 11249
Query 125056 GGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTG 125115
|||| | ||| |||||||| || | | ||||| | | | ||||| | | | | |
Sbjct 11250 GGACCGCCGAGGAGGTCGACCTATGCCAGGACATCCGCCACTGGGAAGCCCTAT---CCG 11306
Query 125116 AAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCG 125175
| ||| | | || | ||||||||| | |||||||| || | ||||||||| ||||
Sbjct 11307 ACGGCGAGAGGCACTTCGTCTCGCACATTCTCGCCTTCTTCGCTGCCTCCGATGGCATCG 11366
Query 125176 TCAACGACAATCT-GTTGACACGATTCTCTCAAGAGTTGACCAT-TC-CAGAGGTGTCGT 125232
|| || ||||| | || | | || | | ||| | ||| || | |||| ||
Sbjct 11367 TCCTTGAAAATCTCGCTGGGAGGTTTATGA-AGGAGGT--CCAGGTCGCCGAGGCC-CGC 11422
Query 125233 GCTTT-TACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTG 125291
|| || ||||| ||||| ||| ||||||||| | ||||| || |||||| ||
Sbjct 11423 GCCTTCTACGGGTTCCAGATCGCCATTGAGAACATCCACTCCGAGATGTACAGCCTCCTT 11482
Query 125292 ATTGACATGTACATTCGCGA-TCCGCAACGTAAA-CACATGCTCTTTAACGCAATCGACA 125349
| || | |||||| || |||| ||| || ||| ||||| |||| |||||||
Sbjct 11483 CTCGAGACGTACATCAAGGACTCCG--ACGAGAAGCACCGCCTCTTCCACGCGATCGACA 11540
Query 125350 CGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGT 125409
| | || | | || ||||| || |||| | | |||||||| | | | |||
Sbjct 11541 CCATCCCCTGCGTCGCGAAGAAGGCCCAGTGGGCCCTGAGATGGATCGACGGCTCCGAGT 11600
Query 125410 CTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTA 125469
||| ||| || || | ||||| || ||| ||| ||||| || ||||| ||||| |
Sbjct 11601 CTTT---CGCGGAGCGAATCGTGGCCTTTGCCTGCGTGGAGGGGATTTTCTTCTCGGGGA 11657
Query 125470 GTTT-TGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGT 125528
|||| |||| | || |||||||| || |||||||| | ||||| |||||||| |
Sbjct 11658 GTTTCTGCG-CGATATTTTGGCTTAAAAAGCGCGGTTTAATGCCGGGACTGACTTTCTCC 11716
Query 125529 AACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGT-TTCG 125587
|||||| | || || |||||||||||| | ||||| ||||| || | | |||| |||
Sbjct 11717 AACGAGCTGATCTCGCGAGACGAGGGCTTGCACTGCGACTTCGCGTGTTTGCTGTATTC- 11775
Query 125588 CAACTATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGA 125647
||| ||| | || | || | |||||| || ||| | || ||| |
Sbjct 11776 --ACT-GCTGAG----GA-AGAAGCT-CAGCGAGGATCGGGTTAAGTCGATCGTACGGAA 11826
Query 125648 TGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCG-GTCAGCATGATTGGCA 125706
|| ||| ||| || ||||| | ||| | || ||| || || || | || |
Sbjct 11827 CGCGGTGGAGATCGAGAGGGAGTTCGTGTGCGACGCGCTGCCGTGTGCGC-TGGTGGGGA 11885
Query 125707 TGAACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGT 125766
||||| || | || ||| || |||||| ||||| ||||| ||||| || ||| | ||
Sbjct 11886 TGAACGGCGATCTGATGGGCACGTACATCGAGTTCGTGGCGGATCGGCTGCTGGGCTCGT 11945
Query 125767 TGATTGGCCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCA- 125825
|| | |||||| ||||| | | |||| || || |||| ||| ||| ||||
Sbjct 11946 TGGGATACGACAAGATGTACAATGTCCAGAACCCGTTCGATTGGATG--GAGCTGATCAG 12003
Query 125826 -CTAGAGGGTAAGACCAACTTTTTCGAGAAGAAGGTCAGCGAGTA 125869
|| |||| ||||||||||| || |||||| ||| |||||||
Sbjct 12004 CCTGCAGGGGAAGACCAACTTCTTTGAGAAGCGCGTCGGCGAGTA 12048
>seq202
Length=624202
Score = 205 bits (226), Expect = 1e-47
Identities = 593/885 (67%), Gaps = 37/885 (4%)
Strand=Plus/Minus
Query 124996 TGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTT 125055
||||||| ||| ||| | || || |||||||||||||| ||||| |||||||||| |
Sbjct 31948 TGTTTCCGATCCAGTACCCAGAAATATGGGAAATGTACAAGAAGGCCGAGGCCTCCTTCT 31889
Query 125056 GGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTG 125115
|||| | ||| |||||||| || | | ||||| | | | ||||| | | | | |
Sbjct 31888 GGACCGCCGAGGAGGTCGACCTATGCCAGGACATCCGCCAGTGGGAAGCCCTAT---CCG 31832
Query 125116 AAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCG 125175
| ||| | | || | ||||||||| | |||||||| || | |||||| || || |
Sbjct 31831 ACGGCGAGAGGCACTTCGTCTCGCACATTCTCGCCTTCTTCGCTGCCTCCGACGGCATTG 31772
Query 125176 TCAACGACAATCT-GTTGACACGATTCTCTCAAGAGTTGACCAT-TC-CAGAGGTGTCGT 125232
|| || ||||| | || | | || | | ||| | ||| || | |||| ||
Sbjct 31771 TCCTTGAAAATCTCGCTGGGAGGTTTATGA-AGGAGGT--CCAGGTCGCCGAGGCC-CGC 31716
Query 125233 GCTTT-TACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTG 125291
|| || ||||| ||||| ||| ||||||||| | ||||| || |||||| ||
Sbjct 31715 GCCTTCTACGGGTTCCAGATCGCCATTGAGAACATCCACTCCGAGATGTACAGCCTCCTT 31656
Query 125292 ATTGACATGTACATTCGCGA-TCCGCAACGTAAA-CACATGCTCTTTAACGCAATCGACA 125349
| || | |||||| || |||| ||| || ||| ||||| |||| |||||||
Sbjct 31655 CTCGAGACGTACATCAAGGACTCCG--ACGAGAAGCACCGCCTCTTCCACGCGATCGACA 31598
Query 125350 CGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGT 125409
| | || | | || ||||| || |||| | | |||||||| | | | |||
Sbjct 31597 CCATCCCTTGCGTCGCGAAGAAGGCCCAGTGGGCCCTGAGATGGATCGACGGCTCCGAGT 31538
Query 125410 CTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTA 125469
||| ||| || || | || || || ||| ||| ||||| || ||||| ||||| |
Sbjct 31537 CTTT---CGCGGAGCGAATCGTAGCCTTTGCCTGCGTGGAGGGGATTTTCTTCTCGGGGA 31481
Query 125470 GTTT-TGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGT 125528
|||| |||| | || |||||||| || |||||||| | ||||| |||||||| |
Sbjct 31480 GTTTCTGCG-CGATATTTTGGCTTAAAAAGCGCGGTTTAATGCCGGGACTGACTTTCTCC 31422
Query 125529 AACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGT-TTCG 125587
|||||| | || || |||||||||||| | ||||| ||||| || | | |||| |||
Sbjct 31421 AACGAGCTGATCTCGCGAGACGAGGGCTTGCACTGCGACTTCGCGTGTTTGCTGTATTC- 31363
Query 125588 CAACTATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGA 125647
||| ||| | || | || | ||||| || ||| || || ||| |
Sbjct 31362 --ACT-GCTGAG----GA-AGAAGCT-GAGCGAGGATCGGGTGATGTCGATCGTACGGAA 31312
Query 125648 TGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCG-GTCAGCATGATTGGCA 125706
|| ||| ||| || |||||| | ||| | || ||| || || || | || |
Sbjct 31311 CGCGGTGGAGATCGAGAGAGAGTTCGTGTGCGACGCGCTGCCGTGTGCGC-TGGTGGGGA 31253
Query 125707 TGAACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGT 125766
||||| || | || ||| || |||||| ||||| ||||| ||||| || ||| | ||
Sbjct 31252 TGAACGGCGATCTGATGGGCACGTACATCGAGTTCGTGGCGGATCGGCTGCTGGGCTCGT 31193
Query 125767 TGATTGGCCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCA- 125825
|| | ||||||| ||||| | | |||| ||||| || | ||| ||| ||||
Sbjct 31192 TGGGATACGGCAAGATGTACAATGTCCAGAACCCCTTCGACTGGATG--GAGCTGATCAG 31135
Query 125826 -CTAGAGGGTAAGACCAACTTTTTCGAGAAGAAGGTCAGCGAGTA 125869
|| |||| ||||||||||| || |||||| ||| |||||||
Sbjct 31134 CCTGCAGGGGAAGACCAACTTCTTTGAGAAGCGCGTCGGCGAGTA 31090
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741038987610320
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