Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12-
03] 2,182 sequences; 508,550,595 total letters
Query= NC_005066.1
Length=164018
Score E
Sequences producing significant alignments: (Bits) Value
seq768 118 1e-21
>seq768
Length=200800
Score = 118 bits (130), Expect = 1e-21
Identities = 137/184 (74%), Gaps = 2/184 (1%)
Strand=Plus/Plus
Query 58440 ATAGTTTGCCAGTCCTACAGAGTCATCATTCGGCATTGCTTTTACTGCCAGTTCAAACCC 58499
||||||||| | ||| | || || || ||||| || || || ||||| ||| | ||
Sbjct 199452 ATAGTTTGCAATACCTTTTGCATCGTCGTTAGGCATCGCCTTGACAGCCAGGTCATAACC 199511
Query 58500 TGCTTCAACTTTCTGTTTAGCGGATTCTTCGTTATAACCCCAGATTACCAGAATAGCTAC 58559
|| || || ||||| || || ||||||||||| || ||||| || ||||| || ||
Sbjct 199512 AGCCTCTACCTTCTGCTTTGCTGATTCTTCGTTGTATCCCCAAATAACCAGGATTTTAAC 199571
Query 58560 TACGTTTTCTTTGCTTACTGCTTTCAGTGCTTTAGTGATGCGACGTGCCATAATTTGATT 58619
||||||||||||| | | |||| || ||||||||||||||||||||| |||| ||
Sbjct 199572 TACGTTTTCTTTGTTCAGAACTTTAAGGTATTTAGTGATGCGACGTGCCAT--TTTGTTT 199629
Query 58620 CTCC 58623
|||
Sbjct 199630 TTCC 199633
Score = 116 bits (128), Expect = 4e-21
Identities = 136/183 (74%), Gaps = 2/183 (1%)
Strand=Plus/Plus
Query 58441 TAGTTTGCCAGTCCTACAGAGTCATCATTCGGCATTGCTTTTACTGCCAGTTCAAACCCT 58500
|||||||| | ||| || ||| || || |||||||| || | ||||| ||| | ||
Sbjct 48452 TAGTTTGCAATACCTTTAGCGTCGTCGTTAGGCATTGCCTTGATAGCCAGGTCATAACCA 48511
Query 58501 GCTTCAACTTTCTGTTTAGCGGATTCTTCGTTATAACCCCAGATTACCAGAATAGCTACT 58560
| || || ||||| || || || |||||||| || ||||| || ||| | || |||
Sbjct 48512 TCCTCGACCTTCTGCTTTGCTGACTCTTCGTTGTATCCCCAAATAACCGGGATCTTAACT 48571
Query 58561 ACGTTTTCTTTGCTTACTGCTTTCAGTGCTTTAGTGATGCGACGTGCCATAATTTGATTC 58620
|||||||||||| | | |||| || |||||||||||||||||||||| |||| ||
Sbjct 48572 ACGTTTTCTTTGTTCAGAACTTTAAGGTCTTTAGTGATGCGACGTGCCAT--TTTGTTTT 48629
Query 58621 TCC 58623
|||
Sbjct 48630 TCC 48632
Score = 116 bits (128), Expect = 4e-21
Identities = 136/183 (74%), Gaps = 2/183 (1%)
Strand=Plus/Plus
Query 58441 TAGTTTGCCAGTCCTACAGAGTCATCATTCGGCATTGCTTTTACTGCCAGTTCAAACCCT 58500
|||||||| | ||| || ||| || || |||||||| || | ||||| ||| | ||
Sbjct 98788 TAGTTTGCAATACCTTTAGCGTCGTCGTTAGGCATTGCCTTGATAGCCAGGTCATAACCA 98847
Query 58501 GCTTCAACTTTCTGTTTAGCGGATTCTTCGTTATAACCCCAGATTACCAGAATAGCTACT 58560
| || || ||||| || || || |||||||| || ||||| || ||| | || |||
Sbjct 98848 TCCTCGACCTTCTGCTTTGCTGACTCTTCGTTGTATCCCCAAATAACCGGGATCTTAACT 98907
Query 58561 ACGTTTTCTTTGCTTACTGCTTTCAGTGCTTTAGTGATGCGACGTGCCATAATTTGATTC 58620
|||||||||||| | | |||| || |||||||||||||||||||||| |||| ||
Sbjct 98908 ACGTTTTCTTTGTTCAGAACTTTAAGGTCTTTAGTGATGCGACGTGCCAT--TTTGTTTT 98965
Query 58621 TCC 58623
|||
Sbjct 98966 TCC 98968
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 524715288000160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |