Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= NC_005066.1 Length=164018 Score E Sequences producing significant alignments: (Bits) Value seq768 118 1e-21 >seq768 Length=200800 Score = 118 bits (130), Expect = 1e-21 Identities = 137/184 (74%), Gaps = 2/184 (1%) Strand=Plus/Plus Query 58440 ATAGTTTGCCAGTCCTACAGAGTCATCATTCGGCATTGCTTTTACTGCCAGTTCAAACCC 58499 ||||||||| | ||| | || || || ||||| || || || ||||| ||| | || Sbjct 199452 ATAGTTTGCAATACCTTTTGCATCGTCGTTAGGCATCGCCTTGACAGCCAGGTCATAACC 199511 Query 58500 TGCTTCAACTTTCTGTTTAGCGGATTCTTCGTTATAACCCCAGATTACCAGAATAGCTAC 58559 || || || ||||| || || ||||||||||| || ||||| || ||||| || || Sbjct 199512 AGCCTCTACCTTCTGCTTTGCTGATTCTTCGTTGTATCCCCAAATAACCAGGATTTTAAC 199571 Query 58560 TACGTTTTCTTTGCTTACTGCTTTCAGTGCTTTAGTGATGCGACGTGCCATAATTTGATT 58619 ||||||||||||| | | |||| || ||||||||||||||||||||| |||| || Sbjct 199572 TACGTTTTCTTTGTTCAGAACTTTAAGGTATTTAGTGATGCGACGTGCCAT--TTTGTTT 199629 Query 58620 CTCC 58623 ||| Sbjct 199630 TTCC 199633 Score = 116 bits (128), Expect = 4e-21 Identities = 136/183 (74%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 58441 TAGTTTGCCAGTCCTACAGAGTCATCATTCGGCATTGCTTTTACTGCCAGTTCAAACCCT 58500 |||||||| | ||| || ||| || || |||||||| || | ||||| ||| | || Sbjct 48452 TAGTTTGCAATACCTTTAGCGTCGTCGTTAGGCATTGCCTTGATAGCCAGGTCATAACCA 48511 Query 58501 GCTTCAACTTTCTGTTTAGCGGATTCTTCGTTATAACCCCAGATTACCAGAATAGCTACT 58560 | || || ||||| || || || |||||||| || ||||| || ||| | || ||| Sbjct 48512 TCCTCGACCTTCTGCTTTGCTGACTCTTCGTTGTATCCCCAAATAACCGGGATCTTAACT 48571 Query 58561 ACGTTTTCTTTGCTTACTGCTTTCAGTGCTTTAGTGATGCGACGTGCCATAATTTGATTC 58620 |||||||||||| | | |||| || |||||||||||||||||||||| |||| || Sbjct 48572 ACGTTTTCTTTGTTCAGAACTTTAAGGTCTTTAGTGATGCGACGTGCCAT--TTTGTTTT 48629 Query 58621 TCC 58623 ||| Sbjct 48630 TCC 48632 Score = 116 bits (128), Expect = 4e-21 Identities = 136/183 (74%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 58441 TAGTTTGCCAGTCCTACAGAGTCATCATTCGGCATTGCTTTTACTGCCAGTTCAAACCCT 58500 |||||||| | ||| || ||| || || |||||||| || | ||||| ||| | || Sbjct 98788 TAGTTTGCAATACCTTTAGCGTCGTCGTTAGGCATTGCCTTGATAGCCAGGTCATAACCA 98847 Query 58501 GCTTCAACTTTCTGTTTAGCGGATTCTTCGTTATAACCCCAGATTACCAGAATAGCTACT 58560 | || || ||||| || || || |||||||| || ||||| || ||| | || ||| Sbjct 98848 TCCTCGACCTTCTGCTTTGCTGACTCTTCGTTGTATCCCCAAATAACCGGGATCTTAACT 98907 Query 58561 ACGTTTTCTTTGCTTACTGCTTTCAGTGCTTTAGTGATGCGACGTGCCATAATTTGATTC 58620 |||||||||||| | | |||| || |||||||||||||||||||||| |||| || Sbjct 98908 ACGTTTTCTTTGTTCAGAACTTTAAGGTCTTTAGTGATGCGACGTGCCAT--TTTGTTTT 98965 Query 58621 TCC 58623 ||| Sbjct 98966 TCC 98968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 524715288000160