Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq15 96.9 2e-15 >seq15 Length=1624393 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 ||||||||| |||| | ||||| || || || |||||| ||||||||||||||| Sbjct 1075288 ACCTCCTCTTAATCGCAGAACCAAGTGGAGGGTCGACTCTTTCTGAATATTATAATCGGC 1075347 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 || || |||| ||||| || ||||| ||||| |||| || ||||||||| | || Sbjct 1075348 TAGGGTTCGGCCATCCTCCAACTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCCGGGGG 1075407 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | || || |||||| || || ||||| | ||| ||| || | ||| || Sbjct 1075408 AATTCCCTCCTTATCTTGGATCTTGGCCTTGACGTTGTCAATAGTGTCCGAGCTCTCGAC 1075467 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | ||||| || || ||||||| || || || || || ||||| Sbjct 1075468 TTCCAGAGTAATCGTCTTCCCGGTTAGGGTTTTGACGAAGATCTGCAT 1075515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354768165354936