Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq615 84.2 2e-11 seq687 82.4 6e-11 seq59 82.4 6e-11 >seq615 Length=266788 Score = 84.2 bits (92), Expect = 2e-11 Identities = 107/146 (73%), Gaps = 1/146 (1%) Strand=Plus/Plus Query 19971 TTTATCATT-TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATG 20029 || ||||| ||||||| | | |||||| |||| || ||||| || || ||||| ||| Sbjct 187735 TTAATCATAGTTCCTCCCCTCAGCCTCAAAACCAGGTGAAGTGTTGACTCCTTTTGGATG 187794 Query 20030 TTGTAATCGCCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGT 20089 || ||||| | | |||| |||||||||||| || || ||| |||| | |||||| Sbjct 187795 TTATAATCTGCAAGAGTTCGGCCATCTTCCAATTGCTTACCAGCAAAAATCAATCTCTGT 187854 Query 20090 TGATCGACGGGCACGCCTTCTTTGTC 20115 ||||| || | ||||||||| || Sbjct 187855 TGATCAGGAGGGATGCCTTCTTTATC 187880 >seq687 Length=229775 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 19999 CACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTC 20058 |||||| || || || || || ||||| |||||||| || | | || | ||| || Sbjct 53781 CACCAAGTGCAGAGTGGACTCCTTTTGAATGTTGTAGTCAGCAAGTGTCCTTCCATCCTC 53722 Query 20059 CAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGC 20118 | || ||||||||| | || | ||| ||||| || ||| | ||| || ||||| Sbjct 53721 GAGCTGCTTGCCCGCAAAGATCAACCTTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTG 53662 Query 20119 AATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTT 20178 ||||| ||||| | ||| | ||| | ||| ||||| |||||||||||| Sbjct 53661 GATTTTGGCCTTCACATTATCAATTGTATCAGAACTTTCAACTTCCAGGGTAATGGTTTT 53602 Query 20179 GCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || ||||| || || ||||| |||||||| Sbjct 53601 CCCAGTCAAGGTCTTCACAAAGATTTGCAT 53572 >seq59 Length=1152742 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 19999 CACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTC 20058 |||||| || || || || || ||||| |||||||| || | | || | ||| || Sbjct 731262 CACCAAGTGCAGAGTGGACTCCTTTTGAATGTTGTAGTCAGCAAGTGTCCTTCCATCCTC 731203 Query 20059 CAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGC 20118 | || ||||||||| | || | ||| ||||| || ||| | ||| || ||||| Sbjct 731202 GAGCTGCTTGCCCGCAAAGATCAACCTTTGTTGGTCTGGGGGAATGCCCTCCTTGTCCTG 731143 Query 20119 AATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTT 20178 ||||| ||||| | ||| | ||| | ||| ||||| |||||||||||| Sbjct 731142 GATTTTGGCCTTCACATTATCAATTGTATCAGAACTTTCAACTTCCAGGGTAATGGTTTT 731083 Query 20179 GCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || ||||| || || ||||| |||||||| Sbjct 731082 CCCAGTCAAGGTCTTCACAAAGATTTGCAT 731053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419576041865142