Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= NC_007603.1 Length=46219 Score E Sequences producing significant alignments: (Bits) Value seq768 159 1e-34 seq2064 149 2e-31 >seq768 Length=200800 Score = 159 bits (176), Expect = 1e-34 Identities = 232/323 (72%), Gaps = 11/323 (3%) Strand=Plus/Plus Query 3141 AGGATTAAGCCATGAAAACTATTACCGCATTTATCGCAAAAGATGTAATTGACGGAGAAA 3200 ||| |||| | |||| || || |||| |||| | || ||||||| | |||| |||| Sbjct 943 AGGCTTAATC-ATGACGACCATCACCGTATTTCTGGCTAAAGATGAGCTGGACGACGAAA 1001 Query 3201 TGTCATTATTCGCGTTCGAGCATAAAACGGGATCGCACTGGCACACTTACAGTCATTACA 3260 ||||| | |||||||||||||||||||| ||||| ||||||||||| ||||| || |||| Sbjct 1002 TGTCACTCTTCGCGTTCGAGCATAAAACAGGATCACACTGGCACACGTACAGCCACTACA 1061 Query 3261 TCGTTATCCCAACCAGCGCCTGCACTGGAGACTCACTAAATGAGAAGCTGCGTAATTTAA 3320 |||||| ||| || | | || || | | | ||| |||||| ||||||| | Sbjct 1062 CGGTTATCGCAATTGAGGCTTACGACGGCGATT---TCACTGACAAGCTGAGTAATTTTA 1118 Query 3321 TTGAGTTAGTTGAGATAATGGAAGGTTGCGA--GGAAA----ATAACAAAGTACCACGCA 3374 |||| ||| || | || || ||||| ||||| || || |||| || | Sbjct 1119 TTGAAGCGGTTAAGGCTAGCGACGGATGCGAATGGAAAGAAGATCACGAAGTTATGCGAA 1178 Query 3375 TGTTCGATATGATTGATCCGGTTTTCATTGAGTCTTTAGAGCTTGATTATGATGTG-GTA 3433 |||| || ||| | |||||||| | |||||||||| |||||||||| | ||||| | | Sbjct 1179 TGTTTGAGATGGTCAATCCGGTTCGCCTTGAGTCTTTCGAGCTTGATTCTCATGTGAGCA 1238 Query 3434 TCTAGTTGAGGAAGTAGGGTGAG 3456 | || |||| ||| ||||||| Sbjct 1239 TTAAGGTGAGAAAGCCGGGTGAG 1261 Score = 159 bits (176), Expect = 1e-34 Identities = 232/323 (72%), Gaps = 11/323 (3%) Strand=Plus/Plus Query 3141 AGGATTAAGCCATGAAAACTATTACCGCATTTATCGCAAAAGATGTAATTGACGGAGAAA 3200 ||| |||| | |||| || || |||| |||| | || ||||||| | |||| |||| Sbjct 51121 AGGCTTAATC-ATGACGACCATCACCGTATTTCTGGCTAAAGATGAGCTGGACGACGAAA 51179 Query 3201 TGTCATTATTCGCGTTCGAGCATAAAACGGGATCGCACTGGCACACTTACAGTCATTACA 3260 ||||| | |||||||||||||||||||| ||||| ||||||||||| ||||| || |||| Sbjct 51180 TGTCACTCTTCGCGTTCGAGCATAAAACAGGATCACACTGGCACACGTACAGCCACTACA 51239 Query 3261 TCGTTATCCCAACCAGCGCCTGCACTGGAGACTCACTAAATGAGAAGCTGCGTAATTTAA 3320 |||||| ||| || | | || || | | | ||| |||||| ||||||| | Sbjct 51240 CGGTTATCGCAATTGAGGCTTACGACGGCGATT---TCACTGACAAGCTGAGTAATTTTA 51296 Query 3321 TTGAGTTAGTTGAGATAATGGAAGGTTGCGA--GGAAA----ATAACAAAGTACCACGCA 3374 |||| ||| || | || || ||||| ||||| || || |||| || | Sbjct 51297 TTGAAGCGGTTAAGGCTAGCGACGGATGCGAATGGAAAGAAGATCACGAAGTTATGCGAA 51356 Query 3375 TGTTCGATATGATTGATCCGGTTTTCATTGAGTCTTTAGAGCTTGATTATGATGTG-GTA 3433 |||| || ||| | |||||||| | |||||||||| |||||||||| | ||||| | | Sbjct 51357 TGTTTGAGATGGTCAATCCGGTTCGCCTTGAGTCTTTCGAGCTTGATTCTCATGTGAGCA 51416 Query 3434 TCTAGTTGAGGAAGTAGGGTGAG 3456 | || |||| ||| ||||||| Sbjct 51417 TTAAGGTGAGAAAGCCGGGTGAG 51439 Score = 159 bits (176), Expect = 1e-34 Identities = 232/323 (72%), Gaps = 11/323 (3%) Strand=Plus/Plus Query 3141 AGGATTAAGCCATGAAAACTATTACCGCATTTATCGCAAAAGATGTAATTGACGGAGAAA 3200 ||| |||| | |||| || || |||| |||| | || ||||||| | |||| |||| Sbjct 101509 AGGCTTAATC-ATGACGACCATCACCGTATTTCTGGCTAAAGATGAGCTGGACGACGAAA 101567 Query 3201 TGTCATTATTCGCGTTCGAGCATAAAACGGGATCGCACTGGCACACTTACAGTCATTACA 3260 ||||| | |||||||||||||||||||| ||||| ||||||||||| ||||| || |||| Sbjct 101568 TGTCACTCTTCGCGTTCGAGCATAAAACAGGATCACACTGGCACACGTACAGCCACTACA 101627 Query 3261 TCGTTATCCCAACCAGCGCCTGCACTGGAGACTCACTAAATGAGAAGCTGCGTAATTTAA 3320 |||||| ||| || | | || || | | | ||| |||||| ||||||| | Sbjct 101628 CGGTTATCGCAATTGAGGCTTACGACGGCGATT---TCACTGACAAGCTGAGTAATTTTA 101684 Query 3321 TTGAGTTAGTTGAGATAATGGAAGGTTGCGA--GGAAA----ATAACAAAGTACCACGCA 3374 |||| ||| || | || || ||||| ||||| || || |||| || | Sbjct 101685 TTGAAGCGGTTAAGGCTAGCGACGGATGCGAATGGAAAGAAGATCACGAAGTTATGCGAA 101744 Query 3375 TGTTCGATATGATTGATCCGGTTTTCATTGAGTCTTTAGAGCTTGATTATGATGTG-GTA 3433 |||| || ||| | |||||||| | |||||||||| |||||||||| | ||||| | | Sbjct 101745 TGTTTGAGATGGTCAATCCGGTTCGCCTTGAGTCTTTCGAGCTTGATTCTCATGTGAGCA 101804 Query 3434 TCTAGTTGAGGAAGTAGGGTGAG 3456 | || |||| ||| ||||||| Sbjct 101805 TTAAGGTGAGAAAGCCGGGTGAG 101827 Score = 159 bits (176), Expect = 1e-34 Identities = 232/323 (72%), Gaps = 11/323 (3%) Strand=Plus/Plus Query 3141 AGGATTAAGCCATGAAAACTATTACCGCATTTATCGCAAAAGATGTAATTGACGGAGAAA 3200 ||| |||| | |||| || || |||| |||| | || ||||||| | |||| |||| Sbjct 151919 AGGCTTAATC-ATGACGACCATCACCGTATTTCTGGCTAAAGATGAGCTGGACGACGAAA 151977 Query 3201 TGTCATTATTCGCGTTCGAGCATAAAACGGGATCGCACTGGCACACTTACAGTCATTACA 3260 ||||| | |||||||||||||||||||| ||||| ||||||||||| ||||| || |||| Sbjct 151978 TGTCACTCTTCGCGTTCGAGCATAAAACAGGATCACACTGGCACACGTACAGCCACTACA 152037 Query 3261 TCGTTATCCCAACCAGCGCCTGCACTGGAGACTCACTAAATGAGAAGCTGCGTAATTTAA 3320 |||||| ||| || | | || || | | | ||| |||||| ||||||| | Sbjct 152038 CGGTTATCGCAATTGAGGCTTACGACGGCGATT---TCACTGACAAGCTGAGTAATTTTA 152094 Query 3321 TTGAGTTAGTTGAGATAATGGAAGGTTGCGA--GGAAA----ATAACAAAGTACCACGCA 3374 |||| ||| || | || || ||||| ||||| || || |||| || | Sbjct 152095 TTGAAGCGGTTAAGGCTAGCGACGGATGCGAATGGAAAGAAGATCACGAAGTTATGCGAA 152154 Query 3375 TGTTCGATATGATTGATCCGGTTTTCATTGAGTCTTTAGAGCTTGATTATGATGTG-GTA 3433 |||| || ||| | |||||||| | |||||||||| |||||||||| | ||||| | | Sbjct 152155 TGTTTGAGATGGTCAATCCGGTTCGCCTTGAGTCTTTCGAGCTTGATTCTCATGTGAGCA 152214 Query 3434 TCTAGTTGAGGAAGTAGGGTGAG 3456 | || |||| ||| ||||||| Sbjct 152215 TTAAGGTGAGAAAGCCGGGTGAG 152237 >seq2064 Length=2442 Score = 149 bits (164), Expect = 2e-31 Identities = 223/313 (71%), Gaps = 9/313 (3%) Strand=Plus/Plus Query 3152 ATGAAAACTATTACCGCATTTATCGCAAAAGATGTAATTGACGGAGAAATGTCATTATTC 3211 |||| ||| ||||||| |||| | || |||||| | |||| || | |||||||| ||| Sbjct 958 ATGACAACCATTACCGTATTTCTGGCTAAAGATATTGTTGATGGCGCTATGTCATTCTTC 1017 Query 3212 GCGTTCGAGCATAAAACGGGATCGCACTGGCACACTTACAGTCATTACATCGTTATCCCA 3271 |||||||||||||||| ||||| ||||||||| |||| | | |||| | ||||||| Sbjct 1018 TCGTTCGAGCATAAAACCGGATCACACTGGCACGAGTACACTTACTACACAGCTATCCCA 1077 Query 3272 ACCAGCGCCTGC-ACTGGAGACTCACTAAATGAGAAGCTGCGTAATTTAATTGAGTTAGT 3330 | | || | | | | || |||||| | ||| |||||| || |||| |||| || Sbjct 1078 ATCGATGCGTACGAAAGTAG-CTCACTCACTGACAAGCTGAGTGATTTCATTGGAGAGGT 1136 Query 3331 TGAGATAATGGAAGGTTGCG------AGGAAAATAACAAAGTACCACGCATGTTCGATAT 3384 | || | | || |||| ||||| || || |||| || ||||| || || Sbjct 1137 TAAGGCTAGTTATGGCTGCGAGTGGAAGGAAGATCACGAAGTTATGCGAATGTTTGAGAT 1196 Query 3385 GATTGATCCGGTTTTCATTGAGTCTTTAGAGCTTGATTATGATGTG-GTATCTAGTTGAG 3443 | | |||||||| ||||||| || ||||||||| ||||||| |||| || |||| Sbjct 1197 GGTCAATCCGGTTCGTCTTGAGTCGTTCGAGCTTGATGCTGATGTGACTATCAAGGTGAG 1256 Query 3444 GAAGTAGGGTGAG 3456 |||| ||||||| Sbjct 1257 AAAGTCGGGTGAG 1269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147775370856204