Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12-
03] 2,182 sequences; 508,550,595 total letters
Query= NC_007603.1
Length=46219
Score E
Sequences producing significant alignments: (Bits) Value
seq768 159 1e-34
seq2064 149 2e-31
>seq768
Length=200800
Score = 159 bits (176), Expect = 1e-34
Identities = 232/323 (72%), Gaps = 11/323 (3%)
Strand=Plus/Plus
Query 3141 AGGATTAAGCCATGAAAACTATTACCGCATTTATCGCAAAAGATGTAATTGACGGAGAAA 3200
||| |||| | |||| || || |||| |||| | || ||||||| | |||| ||||
Sbjct 943 AGGCTTAATC-ATGACGACCATCACCGTATTTCTGGCTAAAGATGAGCTGGACGACGAAA 1001
Query 3201 TGTCATTATTCGCGTTCGAGCATAAAACGGGATCGCACTGGCACACTTACAGTCATTACA 3260
||||| | |||||||||||||||||||| ||||| ||||||||||| ||||| || ||||
Sbjct 1002 TGTCACTCTTCGCGTTCGAGCATAAAACAGGATCACACTGGCACACGTACAGCCACTACA 1061
Query 3261 TCGTTATCCCAACCAGCGCCTGCACTGGAGACTCACTAAATGAGAAGCTGCGTAATTTAA 3320
|||||| ||| || | | || || | | | ||| |||||| ||||||| |
Sbjct 1062 CGGTTATCGCAATTGAGGCTTACGACGGCGATT---TCACTGACAAGCTGAGTAATTTTA 1118
Query 3321 TTGAGTTAGTTGAGATAATGGAAGGTTGCGA--GGAAA----ATAACAAAGTACCACGCA 3374
|||| ||| || | || || ||||| ||||| || || |||| || |
Sbjct 1119 TTGAAGCGGTTAAGGCTAGCGACGGATGCGAATGGAAAGAAGATCACGAAGTTATGCGAA 1178
Query 3375 TGTTCGATATGATTGATCCGGTTTTCATTGAGTCTTTAGAGCTTGATTATGATGTG-GTA 3433
|||| || ||| | |||||||| | |||||||||| |||||||||| | ||||| | |
Sbjct 1179 TGTTTGAGATGGTCAATCCGGTTCGCCTTGAGTCTTTCGAGCTTGATTCTCATGTGAGCA 1238
Query 3434 TCTAGTTGAGGAAGTAGGGTGAG 3456
| || |||| ||| |||||||
Sbjct 1239 TTAAGGTGAGAAAGCCGGGTGAG 1261
Score = 159 bits (176), Expect = 1e-34
Identities = 232/323 (72%), Gaps = 11/323 (3%)
Strand=Plus/Plus
Query 3141 AGGATTAAGCCATGAAAACTATTACCGCATTTATCGCAAAAGATGTAATTGACGGAGAAA 3200
||| |||| | |||| || || |||| |||| | || ||||||| | |||| ||||
Sbjct 51121 AGGCTTAATC-ATGACGACCATCACCGTATTTCTGGCTAAAGATGAGCTGGACGACGAAA 51179
Query 3201 TGTCATTATTCGCGTTCGAGCATAAAACGGGATCGCACTGGCACACTTACAGTCATTACA 3260
||||| | |||||||||||||||||||| ||||| ||||||||||| ||||| || ||||
Sbjct 51180 TGTCACTCTTCGCGTTCGAGCATAAAACAGGATCACACTGGCACACGTACAGCCACTACA 51239
Query 3261 TCGTTATCCCAACCAGCGCCTGCACTGGAGACTCACTAAATGAGAAGCTGCGTAATTTAA 3320
|||||| ||| || | | || || | | | ||| |||||| ||||||| |
Sbjct 51240 CGGTTATCGCAATTGAGGCTTACGACGGCGATT---TCACTGACAAGCTGAGTAATTTTA 51296
Query 3321 TTGAGTTAGTTGAGATAATGGAAGGTTGCGA--GGAAA----ATAACAAAGTACCACGCA 3374
|||| ||| || | || || ||||| ||||| || || |||| || |
Sbjct 51297 TTGAAGCGGTTAAGGCTAGCGACGGATGCGAATGGAAAGAAGATCACGAAGTTATGCGAA 51356
Query 3375 TGTTCGATATGATTGATCCGGTTTTCATTGAGTCTTTAGAGCTTGATTATGATGTG-GTA 3433
|||| || ||| | |||||||| | |||||||||| |||||||||| | ||||| | |
Sbjct 51357 TGTTTGAGATGGTCAATCCGGTTCGCCTTGAGTCTTTCGAGCTTGATTCTCATGTGAGCA 51416
Query 3434 TCTAGTTGAGGAAGTAGGGTGAG 3456
| || |||| ||| |||||||
Sbjct 51417 TTAAGGTGAGAAAGCCGGGTGAG 51439
Score = 159 bits (176), Expect = 1e-34
Identities = 232/323 (72%), Gaps = 11/323 (3%)
Strand=Plus/Plus
Query 3141 AGGATTAAGCCATGAAAACTATTACCGCATTTATCGCAAAAGATGTAATTGACGGAGAAA 3200
||| |||| | |||| || || |||| |||| | || ||||||| | |||| ||||
Sbjct 101509 AGGCTTAATC-ATGACGACCATCACCGTATTTCTGGCTAAAGATGAGCTGGACGACGAAA 101567
Query 3201 TGTCATTATTCGCGTTCGAGCATAAAACGGGATCGCACTGGCACACTTACAGTCATTACA 3260
||||| | |||||||||||||||||||| ||||| ||||||||||| ||||| || ||||
Sbjct 101568 TGTCACTCTTCGCGTTCGAGCATAAAACAGGATCACACTGGCACACGTACAGCCACTACA 101627
Query 3261 TCGTTATCCCAACCAGCGCCTGCACTGGAGACTCACTAAATGAGAAGCTGCGTAATTTAA 3320
|||||| ||| || | | || || | | | ||| |||||| ||||||| |
Sbjct 101628 CGGTTATCGCAATTGAGGCTTACGACGGCGATT---TCACTGACAAGCTGAGTAATTTTA 101684
Query 3321 TTGAGTTAGTTGAGATAATGGAAGGTTGCGA--GGAAA----ATAACAAAGTACCACGCA 3374
|||| ||| || | || || ||||| ||||| || || |||| || |
Sbjct 101685 TTGAAGCGGTTAAGGCTAGCGACGGATGCGAATGGAAAGAAGATCACGAAGTTATGCGAA 101744
Query 3375 TGTTCGATATGATTGATCCGGTTTTCATTGAGTCTTTAGAGCTTGATTATGATGTG-GTA 3433
|||| || ||| | |||||||| | |||||||||| |||||||||| | ||||| | |
Sbjct 101745 TGTTTGAGATGGTCAATCCGGTTCGCCTTGAGTCTTTCGAGCTTGATTCTCATGTGAGCA 101804
Query 3434 TCTAGTTGAGGAAGTAGGGTGAG 3456
| || |||| ||| |||||||
Sbjct 101805 TTAAGGTGAGAAAGCCGGGTGAG 101827
Score = 159 bits (176), Expect = 1e-34
Identities = 232/323 (72%), Gaps = 11/323 (3%)
Strand=Plus/Plus
Query 3141 AGGATTAAGCCATGAAAACTATTACCGCATTTATCGCAAAAGATGTAATTGACGGAGAAA 3200
||| |||| | |||| || || |||| |||| | || ||||||| | |||| ||||
Sbjct 151919 AGGCTTAATC-ATGACGACCATCACCGTATTTCTGGCTAAAGATGAGCTGGACGACGAAA 151977
Query 3201 TGTCATTATTCGCGTTCGAGCATAAAACGGGATCGCACTGGCACACTTACAGTCATTACA 3260
||||| | |||||||||||||||||||| ||||| ||||||||||| ||||| || ||||
Sbjct 151978 TGTCACTCTTCGCGTTCGAGCATAAAACAGGATCACACTGGCACACGTACAGCCACTACA 152037
Query 3261 TCGTTATCCCAACCAGCGCCTGCACTGGAGACTCACTAAATGAGAAGCTGCGTAATTTAA 3320
|||||| ||| || | | || || | | | ||| |||||| ||||||| |
Sbjct 152038 CGGTTATCGCAATTGAGGCTTACGACGGCGATT---TCACTGACAAGCTGAGTAATTTTA 152094
Query 3321 TTGAGTTAGTTGAGATAATGGAAGGTTGCGA--GGAAA----ATAACAAAGTACCACGCA 3374
|||| ||| || | || || ||||| ||||| || || |||| || |
Sbjct 152095 TTGAAGCGGTTAAGGCTAGCGACGGATGCGAATGGAAAGAAGATCACGAAGTTATGCGAA 152154
Query 3375 TGTTCGATATGATTGATCCGGTTTTCATTGAGTCTTTAGAGCTTGATTATGATGTG-GTA 3433
|||| || ||| | |||||||| | |||||||||| |||||||||| | ||||| | |
Sbjct 152155 TGTTTGAGATGGTCAATCCGGTTCGCCTTGAGTCTTTCGAGCTTGATTCTCATGTGAGCA 152214
Query 3434 TCTAGTTGAGGAAGTAGGGTGAG 3456
| || |||| ||| |||||||
Sbjct 152215 TTAAGGTGAGAAAGCCGGGTGAG 152237
>seq2064
Length=2442
Score = 149 bits (164), Expect = 2e-31
Identities = 223/313 (71%), Gaps = 9/313 (3%)
Strand=Plus/Plus
Query 3152 ATGAAAACTATTACCGCATTTATCGCAAAAGATGTAATTGACGGAGAAATGTCATTATTC 3211
|||| ||| ||||||| |||| | || |||||| | |||| || | |||||||| |||
Sbjct 958 ATGACAACCATTACCGTATTTCTGGCTAAAGATATTGTTGATGGCGCTATGTCATTCTTC 1017
Query 3212 GCGTTCGAGCATAAAACGGGATCGCACTGGCACACTTACAGTCATTACATCGTTATCCCA 3271
|||||||||||||||| ||||| ||||||||| |||| | | |||| | |||||||
Sbjct 1018 TCGTTCGAGCATAAAACCGGATCACACTGGCACGAGTACACTTACTACACAGCTATCCCA 1077
Query 3272 ACCAGCGCCTGC-ACTGGAGACTCACTAAATGAGAAGCTGCGTAATTTAATTGAGTTAGT 3330
| | || | | | | || |||||| | ||| |||||| || |||| |||| ||
Sbjct 1078 ATCGATGCGTACGAAAGTAG-CTCACTCACTGACAAGCTGAGTGATTTCATTGGAGAGGT 1136
Query 3331 TGAGATAATGGAAGGTTGCG------AGGAAAATAACAAAGTACCACGCATGTTCGATAT 3384
| || | | || |||| ||||| || || |||| || ||||| || ||
Sbjct 1137 TAAGGCTAGTTATGGCTGCGAGTGGAAGGAAGATCACGAAGTTATGCGAATGTTTGAGAT 1196
Query 3385 GATTGATCCGGTTTTCATTGAGTCTTTAGAGCTTGATTATGATGTG-GTATCTAGTTGAG 3443
| | |||||||| ||||||| || ||||||||| ||||||| |||| || ||||
Sbjct 1197 GGTCAATCCGGTTCGTCTTGAGTCGTTCGAGCTTGATGCTGATGTGACTATCAAGGTGAG 1256
Query 3444 GAAGTAGGGTGAG 3456
|||| |||||||
Sbjct 1257 AAAGTCGGGTGAG 1269
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 147775370856204
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |