Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12- 03] 2,182 sequences; 508,550,595 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq615 96.9 3e-15 seq15 84.2 2e-11 >seq615 Length=266788 Score = 96.9 bits (106), Expect = 3e-15 Identities = 103/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 115379 GATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAA 115438 |||||||||||| |||| |||||| || ||| | |||| ||| || || ||||| ||| Sbjct 187880 GATAAAGAAGGCATCCCTCCTGATCAACAGAGATTGATTTTTGCTGGTAAGCAATTGGAA 187821 Query 115439 GATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 |||| | ||| | || ||||||||||| ||||| ||||| || | || |||| ||| Sbjct 187820 GATGGCCGAACTCTTGCAGATTATAACATCCAAAAGGAGTCAACACTTCACCTGGTTTTG 187761 Query 115499 AGATTGCGAGGAGGAA 115514 || || | ||||||| Sbjct 187760 AGGCTGAGGGGAGGAA 187745 >seq15 Length=1624393 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || || |||||||| || || || || || ||||| | ||| ||| | Sbjct 1075515 ATGCAGATCTTCGTCAAAACCCTAACCGGGAAGACGATTACTCTGGAAGTCGAGAGCTCG 1075456 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||||| ||| |||| || || || || ||||| || || | ||| || || Sbjct 1075455 GACACTATTG-ACAACGTCAAGGCCAAGATCCAAGATAAGGAGGGAATTCCCCCGGACCA 1075397 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| || || || | ||| || || || || || |||| | |||| | ||||||||||| Sbjct 1075396 GCAGAGGCTGATCTTTGCCGGAAAGCAGTTGGAGGATGGCCGAACCCTAGCCGATTATAA 1075337 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||| |||||||| || | || |||| || |||| ||||||| Sbjct 1075336 TATTCAGAAAGAGTCGACCCTCCACTTGGTTCTGCGATTAAGAGGAGG 1075289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425332688773840