Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrus_20x_20bretschneideri_20[refseq_20GCF_5F000315295.1_202012-12-
03] 2,182 sequences; 508,550,595 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
seq615 96.9 3e-15
seq15 84.2 2e-11
>seq615
Length=266788
Score = 96.9 bits (106), Expect = 3e-15
Identities = 103/136 (76%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 115379 GATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAA 115438
|||||||||||| |||| |||||| || ||| | |||| ||| || || ||||| |||
Sbjct 187880 GATAAAGAAGGCATCCCTCCTGATCAACAGAGATTGATTTTTGCTGGTAAGCAATTGGAA 187821
Query 115439 GATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498
|||| | ||| | || ||||||||||| ||||| ||||| || | || |||| |||
Sbjct 187820 GATGGCCGAACTCTTGCAGATTATAACATCCAAAAGGAGTCAACACTTCACCTGGTTTTG 187761
Query 115499 AGATTGCGAGGAGGAA 115514
|| || | |||||||
Sbjct 187760 AGGCTGAGGGGAGGAA 187745
>seq15
Length=1624393
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||| || || |||||||| || || || || || ||||| | ||| ||| |
Sbjct 1075515 ATGCAGATCTTCGTCAAAACCCTAACCGGGAAGACGATTACTCTGGAAGTCGAGAGCTCG 1075456
Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404
|||||| ||| |||| || || || || ||||| || || | ||| || ||
Sbjct 1075455 GACACTATTG-ACAACGTCAAGGCCAAGATCCAAGATAAGGAGGGAATTCCCCCGGACCA 1075397
Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464
||| || || || | ||| || || || || || |||| | |||| | |||||||||||
Sbjct 1075396 GCAGAGGCTGATCTTTGCCGGAAAGCAGTTGGAGGATGGCCGAACCCTAGCCGATTATAA 1075337
Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
||||| |||||||| || | || |||| || |||| |||||||
Sbjct 1075336 TATTCAGAAAGAGTCGACCCTCCACTTGGTTCTGCGATTAAGAGGAGG 1075289
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425332688773840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |